RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C YOL166W-AQ8TGJ1 51 aa-0.2□□□□□ -2.44
SWI5YDR146C SCC2Q04002 1493 aa-0.21□□□□□ -2.44
SWI5YDR146C CUP1-1P0CX80 61 aa-0.21□□□□□ -2.44
SWI5YDR146C CUP1-2P0CX81 61 aa-0.21□□□□□ -2.44
SWI5YDR146C YIL102C-AQ2V2P5 75 aa-0.21□□□□□ -2.44
SWI5YDR146C YOR093CQ12275 1648 aa-0.21□□□□□ -2.44
SWI5YDR146C TCB3Q03640 1545 aaKnown RBP-0.22□□□□□ -2.44
SWI5YDR146C YML054C-AQ3E809 52 aa-0.22□□□□□ -2.44
SWI5YDR146C TEL1P38110 2787 aa-0.22□□□□□ -2.44
SWI5YDR146C YOR316C-AQ3E806 69 aa-0.22□□□□□ -2.44
SWI5YDR146C MYO4P32492 1471 aa-0.22□□□□□ -2.45
SWI5YDR146C PDR5P33302 1511 aaKnown RBP-0.23□□□□□ -2.45
SWI5YDR146C RPL29P05747 59 aaPredicted RBP-0.23□□□□□ -2.45
SWI5YDR146C YDR034C-AP0C289 58 aa-0.23□□□□□ -2.45
SWI5YDR146C YPR010C-AA5Z2X5 72 aa-0.23□□□□□ -2.45
SWI5YDR146C FLO1P32768 1537 aa-0.24□□□□□ -2.45
SWI5YDR146C YCF1P39109 1515 aaKnown RBP-0.24□□□□□ -2.45
SWI5YDR146C GCN1P33892 2672 aaKnown RBP-0.25□□□□□ -2.45
SWI5YDR146C VMA9Q3E7B6 73 aa-0.25□□□□□ -2.45
SWI5YDR146C YBT1P32386 1661 aa-0.25□□□□□ -2.45
SWI5YDR146C NUP188P52593 1655 aaKnown RBP-0.25□□□□□ -2.45
SWI5YDR146C YKL023C-AQ2V2P3 75 aa-0.25□□□□□ -2.45
SWI5YDR146C SSK2P53599 1579 aa-0.26□□□□□ -2.45
SWI5YDR146C YMR105W-AQ8TGS8 64 aa-0.26□□□□□ -2.45
SWI5YDR146C BUD3P25558 1636 aa-0.26□□□□□ -2.45
SWI5YDR146C COX9P07255 59 aa-0.26□□□□□ -2.45
SWI5YDR146C STU1P38198 1513 aa-0.27□□□□□ -2.45
SWI5YDR146C ATG2P53855 1592 aa-0.27□□□□□ -2.45
SWI5YDR146C YHR073W-AP0C5N7 58 aa-0.27□□□□□ -2.45
SWI5YDR146C DDR2P89113 61 aa-0.27□□□□□ -2.45
SWI5YDR146C YJL133C-AQ3E7A3 74 aa-0.27□□□□□ -2.45
SWI5YDR146C NUP170P38181 1502 aa-0.28□□□□□ -2.45
SWI5YDR146C GCN2P15442 1659 aa-0.28□□□□□ -2.45
SWI5YDR146C CDC25P04821 1589 aa-0.28□□□□□ -2.45
SWI5YDR146C YFR010W-AP0C5N0 62 aa-0.28□□□□□ -2.45
SWI5YDR146C ULS1Q08562 1619 aa-0.29□□□□□ -2.46
SWI5YDR146C NUP192P47054 1683 aa-0.29□□□□□ -2.46
SWI5YDR146C PEP1P32319 1579 aa-0.29□□□□□ -2.46
SWI5YDR146C YLR342W-AQ3E810 57 aa-0.29□□□□□ -2.46
SWI5YDR146C SPT6P23615 1451 aaKnown RBP-0.31□□□□□ -2.46
SWI5YDR146C USO1P25386 1790 aa-0.31□□□□□ -2.46
SWI5YDR146C HIR3P47171 1648 aa-0.31□□□□□ -2.46
SWI5YDR146C RKR1Q04781 1562 aa-0.31□□□□□ -2.46
SWI5YDR146C TRA1P38811 3744 aa-0.31□□□□□ -2.46
SWI5YDR146C YJL127C-BQ3E828 52 aa-0.31□□□□□ -2.46
SWI5YDR146C SMX2P40204 77 aaKnown RBP-0.32□□□□□ -2.46
SWI5YDR146C PMP3P87284 55 aa-0.32□□□□□ -2.46
SWI5YDR146C CSF1Q12150 2958 aa-0.32□□□□□ -2.46
SWI5YDR146C IRA1P18963 3092 aa-0.34□□□□□ -2.46
SWI5YDR146C MON2P48563 1636 aaPredicted RBP-0.34□□□□□ -2.46
SWI5YDR146C HOR7Q05827 59 aa-0.35□□□□□ -2.47
SWI5YDR146C YLL066W-BQ8TGJ7 56 aa-0.36□□□□□ -2.47
SWI5YDR146C IRA2P19158 3079 aa-0.37□□□□□ -2.47
SWI5YDR146C CHC1P22137 1653 aaKnown RBP-0.37□□□□□ -2.47
SWI5YDR146C MLP2P40457 1679 aa-0.39□□□□□ -2.47
SWI5YDR146C TOM7P53507 60 aa-0.4□□□□□ -2.47
SWI5YDR146C VPS13Q07878 3144 aa-0.43□□□□□ -2.48
SWI5YDR146C NCE101Q02820 53 aa-0.44□□□□□ -2.48
SWI5YDR146C RPL39P04650 51 aa-0.52□□□□□ -2.49
SWI5YDR146C TOM1Q03280 3268 aa-0.53□□□□□ -2.49
SWI5YDR146C Q0297Q9ZZV8 51 aa-0.56□□□□□ -2.5
SWI5YDR146C YIL046W-AQ3E7Z4 54 aa-0.59□□□□□ -2.5
SWI5YDR146C YDR034W-BQ6Q5X2 51 aa-0.77□□□□□ -2.53
Retrieved 63 of 5,963 RNA–protein pairs in 6.2 ms