RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C BPH1P25356 2167 aa1.36□□□□□ -2.19
NPL4YBR170C RPS27AP35997 82 aaKnown RBP1.36□□□□□ -2.19
NPL4YBR170C RPS27BP38711 82 aa1.36□□□□□ -2.19
NPL4YBR170C YOL097W-AQ3E7Y9 61 aa1.36□□□□□ -2.19
NPL4YBR170C YPR010C-AA5Z2X5 72 aa1.35□□□□□ -2.19
NPL4YBR170C YOR008C-AQ3E7B9 74 aa1.35□□□□□ -2.19
NPL4YBR170C YFR009W-AP0C5M9 85 aa1.35□□□□□ -2.19
NPL4YBR170C SEN1Q00416 2231 aaKnown RBP1.33□□□□□ -2.2
NPL4YBR170C YBL039W-BP0C268 59 aa1.33□□□□□ -2.2
NPL4YBR170C YDR524C-BQ3E6R4 66 aa1.33□□□□□ -2.2
NPL4YBR170C IRA2P19158 3079 aa1.33□□□□□ -2.2
NPL4YBR170C VPS13Q07878 3144 aa1.32□□□□□ -2.2
NPL4YBR170C YBR200W-AQ3E755 54 aa1.31□□□□□ -2.2
NPL4YBR170C YIL046W-AQ3E7Z4 54 aa1.31□□□□□ -2.2
NPL4YBR170C YOR011W-AQ3E807 68 aa1.31□□□□□ -2.2
NPL4YBR170C YGR025WP53216 100 aa1.3□□□□□ -2.2
NPL4YBR170C YMR105W-AQ8TGS8 64 aa1.3□□□□□ -2.2
NPL4YBR170C RPS29BP41058 56 aaKnown RBP1.28□□□□□ -2.2
NPL4YBR170C SIP18P50263 79 aa1.28□□□□□ -2.2
NPL4YBR170C RPL39P04650 51 aa1.27□□□□□ -2.21
NPL4YBR170C YLL006W-AQ3E814 58 aa1.26□□□□□ -2.21
NPL4YBR170C YOR394C-AQ8TGJ0 55 aa1.26□□□□□ -2.21
NPL4YBR170C CSF1Q12150 2958 aa1.26□□□□□ -2.21
NPL4YBR170C RPL29P05747 59 aaPredicted RBP1.26□□□□□ -2.21
NPL4YBR170C YBR230W-AQ3E762 66 aa1.26□□□□□ -2.21
NPL4YBR170C YJL133C-AQ3E7A3 74 aa1.26□□□□□ -2.21
NPL4YBR170C PMP3P87284 55 aa1.23□□□□□ -2.21
NPL4YBR170C TAO3P40468 2376 aa1.23□□□□□ -2.21
NPL4YBR170C IRA1P18963 3092 aa1.22□□□□□ -2.21
NPL4YBR170C OLI1P61829 76 aa1.22□□□□□ -2.21
NPL4YBR170C DDR2P89113 61 aa1.21□□□□□ -2.22
NPL4YBR170C TRA1P38811 3744 aa1.21□□□□□ -2.22
NPL4YBR170C YJL127C-BQ3E828 52 aa1.2□□□□□ -2.22
NPL4YBR170C GCN1P33892 2672 aaKnown RBP1.2□□□□□ -2.22
NPL4YBR170C YBR016WP38216 128 aa1.2□□□□□ -2.22
NPL4YBR170C HOR7Q05827 59 aa1.2□□□□□ -2.22
NPL4YBR170C YCR108CQ3E819 63 aa1.19□□□□□ -2.22
NPL4YBR170C NUM1Q00402 2748 aa1.19□□□□□ -2.22
NPL4YBR170C YGR146C-AQ8TGT9 53 aa1.18□□□□□ -2.22
NPL4YBR170C FMP27Q06179 2628 aa1.17□□□□□ -2.22
NPL4YBR170C YBL044WP38194 122 aa1.16□□□□□ -2.22
NPL4YBR170C UTP20P35194 2493 aaKnown RBP1.13□□□□□ -2.23
NPL4YBR170C YLL066W-BQ8TGJ7 56 aa1.13□□□□□ -2.23
NPL4YBR170C YOR316C-AQ3E806 69 aa1.12□□□□□ -2.23
NPL4YBR170C YDR034W-BQ6Q5X2 51 aa1.12□□□□□ -2.23
NPL4YBR170C YPR117WQ06116 2489 aa1.11□□□□□ -2.23
NPL4YBR170C MEC1P38111 2368 aa1.1□□□□□ -2.23
NPL4YBR170C YHR073W-AP0C5N7 58 aa1.09□□□□□ -2.24
NPL4YBR170C TOR2P32600 2474 aaKnown RBP1.07□□□□□ -2.24
NPL4YBR170C Q0297Q9ZZV8 51 aa1.07□□□□□ -2.24
NPL4YBR170C TEL1P38110 2787 aa1.05□□□□□ -2.24
NPL4YBR170C YBR056W-AI2HB52 66 aa1.03□□□□□ -2.24
NPL4YBR170C YOR072W-BQ3E832 53 aa1.03□□□□□ -2.24
NPL4YBR170C YDR034C-AP0C289 58 aa1.02□□□□□ -2.25
NPL4YBR170C TOR1P35169 2470 aa0.97□□□□□ -2.25
NPL4YBR170C DYN1P36022 4092 aa0.92□□□□□ -2.26
NPL4YBR170C CUP1-1P0CX80 61 aa0.89□□□□□ -2.27
NPL4YBR170C CUP1-2P0CX81 61 aa0.89□□□□□ -2.27
NPL4YBR170C YML054C-AQ3E809 52 aa0.88□□□□□ -2.27
NPL4YBR170C Q0017Q9ZZX8 53 aa0.85□□□□□ -2.27
NPL4YBR170C MDN1Q12019 4910 aaKnown RBP0.84□□□□□ -2.27
NPL4YBR170C RPS29AP41057 56 aaKnown RBP0.81□□□□□ -2.28
NPL4YBR170C YHR050W-AQ05451 56 aa0.78□□□□□ -2.28
Retrieved 63 of 5,963 RNA–protein pairs in 5.9 ms