RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 CHC1P22137 1653 aaKnown RBP-0.64□□□□□ -2.51
NME1NME1 IML1P47170 1584 aa-0.64□□□□□ -2.51
NME1NME1 YDR034C-AP0C289 58 aa-0.64□□□□□ -2.51
NME1NME1 SIP18P50263 79 aa-0.64□□□□□ -2.51
NME1NME1 NUP188P52593 1655 aaKnown RBP-0.65□□□□□ -2.51
NME1NME1 SPT6P23615 1451 aaKnown RBP-0.65□□□□□ -2.51
NME1NME1 TIM12P32830 109 aa-0.65□□□□□ -2.51
NME1NME1 YDR034W-BQ6Q5X2 51 aa-0.66□□□□□ -2.52
NME1NME1 YOR394C-AQ8TGJ0 55 aa-0.66□□□□□ -2.52
NME1NME1 Q0297Q9ZZV8 51 aa-0.66□□□□□ -2.52
NME1NME1 IQG1Q12280 1495 aa-0.67□□□□□ -2.52
NME1NME1 HIR3P47171 1648 aa-0.67□□□□□ -2.52
NME1NME1 MON2P48563 1636 aaPredicted RBP-0.67□□□□□ -2.52
NME1NME1 RPS30AP0CX33 63 aaKnown RBP-0.68□□□□□ -2.52
NME1NME1 RPS30BP0CX34 63 aaKnown RBP-0.68□□□□□ -2.52
NME1NME1 YIL046W-AQ3E7Z4 54 aa-0.68□□□□□ -2.52
NME1NME1 YGR146C-AQ8TGT9 53 aa-0.68□□□□□ -2.52
NME1NME1 UFD4P33202 1483 aa-0.68□□□□□ -2.52
NME1NME1 KOG1P38873 1557 aa-0.69□□□□□ -2.52
NME1NME1 TOM7P53507 60 aa-0.69□□□□□ -2.52
NME1NME1 YJL133C-AQ3E7A3 74 aa-0.69□□□□□ -2.52
NME1NME1 YOR316C-AQ3E806 69 aa-0.69□□□□□ -2.52
NME1NME1 SCC2Q04002 1493 aa-0.69□□□□□ -2.52
NME1NME1 BUD3P25558 1636 aa-0.7□□□□□ -2.52
NME1NME1 YLR157W-DP0CE99 70 aa-0.7□□□□□ -2.52
NME1NME1 PAU7P39545 55 aa-0.7□□□□□ -2.52
NME1NME1 SPI1P40092 148 aa-0.7□□□□□ -2.52
NME1NME1 DOP1Q03921 1698 aa-0.7□□□□□ -2.52
NME1NME1 VMR1P38735 1592 aa-0.7□□□□□ -2.52
NME1NME1 YPR010C-AA5Z2X5 72 aa-0.71□□□□□ -2.52
NME1NME1 RPS27BP38711 82 aa-0.71□□□□□ -2.52
NME1NME1 YOR011W-AQ3E807 68 aa-0.71□□□□□ -2.52
NME1NME1 PDR15Q04182 1529 aaKnown RBP-0.71□□□□□ -2.52
NME1NME1 PEP1P32319 1579 aa-0.71□□□□□ -2.52
NME1NME1 MYO4P32492 1471 aa-0.72□□□□□ -2.52
NME1NME1 PMP3P87284 55 aa-0.72□□□□□ -2.52
NME1NME1 MLP2P40457 1679 aa-0.72□□□□□ -2.53
NME1NME1 DDR2P89113 61 aa-0.73□□□□□ -2.53
NME1NME1 HOR7Q05827 59 aa-0.73□□□□□ -2.53
NME1NME1 YBR230W-AQ3E762 66 aa-0.73□□□□□ -2.53
NME1NME1 ATG2P53855 1592 aa-0.74□□□□□ -2.53
NME1NME1 ERI1P62651 68 aaKnown RBP-0.74□□□□□ -2.53
NME1NME1 NUP170P38181 1502 aa-0.75□□□□□ -2.53
NME1NME1 USO1P25386 1790 aa-0.75□□□□□ -2.53
NME1NME1 YBL039W-BP0C268 59 aa-0.76□□□□□ -2.53
NME1NME1 COX9P07255 59 aa-0.77□□□□□ -2.53
NME1NME1 YKL023C-AQ2V2P3 75 aa-0.77□□□□□ -2.53
NME1NME1 YJL127C-BQ3E828 52 aa-0.78□□□□□ -2.53
NME1NME1 HUB1Q6Q546 73 aa-0.78□□□□□ -2.53
NME1NME1 YFR010W-AP0C5N0 62 aa-0.79□□□□□ -2.54
NME1NME1 RPL39P04650 51 aa-0.81□□□□□ -2.54
NME1NME1 YOL131WQ08270 108 aa-0.82□□□□□ -2.54
NME1NME1 YLR342W-AQ3E810 57 aa-0.82□□□□□ -2.54
NME1NME1 SMX2P40204 77 aaKnown RBP-0.83□□□□□ -2.54
NME1NME1 SSS1P35179 80 aa-0.84□□□□□ -2.54
NME1NME1 NCE101Q02820 53 aa-0.85□□□□□ -2.55
NME1NME1 YFL041W-AQ3E817 63 aa-0.85□□□□□ -2.55
NME1NME1 YOL166W-AQ8TGJ1 51 aa-0.87□□□□□ -2.55
NME1NME1 YSY6P38374 65 aa-0.9□□□□□ -2.55
NME1NME1 YHR213W-AQ8TGT4 77 aa-0.9□□□□□ -2.55
NME1NME1 YIL102C-AQ2V2P5 75 aa-0.95□□□□□ -2.56
NME1NME1 PAI3P01094 68 aa-0.96□□□□□ -2.56
NME1NME1 VMA9Q3E7B6 73 aa-1.03□□□□□ -2.57
Retrieved 63 of 5,963 RNA–protein pairs in 10.8 ms