RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 MUC6Q6W4X9 2439 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 PIK3R2O00459 728 aa20.67■□□□□ 0.9
SHKBP1-214ENST00000597396 TPM3P06753 285 aa20.67■□□□□ 0.9
SHKBP1-214ENST00000597396 MBL2P11226 248 aaPredicted RBP20.67■□□□□ 0.9
SHKBP1-214ENST00000597396 TUBP50607 506 aa20.67■□□□□ 0.9
SHKBP1-214ENST00000597396 HFE2Q6ZVN8 426 aa20.67■□□□□ 0.9
SHKBP1-214ENST00000597396 ARHGAP18Q8N392 663 aa20.67■□□□□ 0.9
SHKBP1-214ENST00000597396 BPIFB1Q8TDL5 484 aa20.67■□□□□ 0.9
SHKBP1-214ENST00000597396 CCSER2Q9H7U1 834 aa20.67■□□□□ 0.9
SHKBP1-214ENST00000597396 BRD9Q9H8M2 597 aa20.67■□□□□ 0.9
SHKBP1-214ENST00000597396 NMUR1Q9HB89 426 aa20.67■□□□□ 0.9
SHKBP1-214ENST00000597396 CNGB3Q9NQW8 809 aa20.67■□□□□ 0.9
SHKBP1-214ENST00000597396 CCL26Q9Y258 94 aa20.67■□□□□ 0.9
SHKBP1-214ENST00000597396 TECTAO75443 2155 aa20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 TLR5O60602 858 aa20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 RALAP11233 206 aa20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 GDI1P31150 447 aa20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 ACADSBP45954 432 aa20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 PGFP49763 221 aa20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 GPC5P78333 572 aa20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 SIGLEC14Q08ET2 396 aa20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 TAF3Q5VWG9 929 aa20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 PM20D1Q6GTS8 502 aa20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 NOX5Q96PH1 765 aa20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 RNF38Q9H0F5 515 aa20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 THG1LQ9NWX6 298 aaKnown RBP20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 FBXL21Q9UKT6 434 aa20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 ARHGAP26Q9UNA1 814 aa20.66■□□□□ 0.9
SHKBP1-214ENST00000597396 ZNF263O14978 683 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 COCHO43405 550 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 CBFA2T2O43439 604 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 OLFM2O95897 454 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 RARGP13631 454 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 YWHAGP61981 247 aaKnown RBP eCLIP20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 SLC7A9P82251 487 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 PFKPQ01813 784 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 ARID5AQ03989 594 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 SCD5Q86SK9 330 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 NOP9Q86U38 636 aaKnown RBP20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 EPS8L1Q8TE68 723 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 SH3RF2Q8TEC5 729 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 STK32AQ8WU08 396 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 NDRG1Q92597 394 aaKnown RBP20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 XPO4Q9C0E2 1151 aaKnown RBP20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 LHX5Q9H2C1 402 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 CYLDQ9NQC7 956 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 SLC2A4RGQ9NR83 387 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 OSER1Q9NX31 292 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 SMPD4Q9NXE4 827 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 CPQQ9Y646 472 aa20.65■□□□□ 0.9
SHKBP1-214ENST00000597396 FBXO21O94952 628 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 ATP5C1P36542 298 aaKnown RBP20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 DAOAP59103 153 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 PLCB2Q00722 1185 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 FCHO2Q0JRZ9 810 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 USP4Q13107 963 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 PDCLQ13371 301 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 ARHGAP29Q52LW3 1261 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 C10orf120Q5SQS8 335 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 BTBD8Q5XKL5 378 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 CC2D1AQ6P1N0 951 aaPredicted RBP20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 TRIM67Q6ZTA4 783 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 TADA2BQ86TJ2 420 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 ZNF677Q86XU0 584 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 FMNL3Q8IVF7 1028 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 SCML4Q8N228 414 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 C1orf131Q8NDD1 294 aaKnown RBP20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 IRF7Q92985 503 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 LRRC3BQ96PB8 259 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 CDK5RAP1Q96SZ6 601 aaKnown RBP20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 NUP58Q9BVL2 599 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 SLC4A5Q9BY07 1137 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 MIS12Q9H081 205 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 CLIC5Q9NZA1 410 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 CYTH4Q9UIA0 394 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 MYO6Q9UM54 1294 aa20.64■□□□□ 0.89
SHKBP1-214ENST00000597396 CHADO15335 359 aa20.63■□□□□ 0.89
SHKBP1-214ENST00000597396 GABBR2O75899 941 aa20.63■□□□□ 0.89
SHKBP1-214ENST00000597396 CCDC172P0C7W6 258 aa20.63■□□□□ 0.89
SHKBP1-214ENST00000597396 FERP16591 822 aa20.63■□□□□ 0.89
SHKBP1-214ENST00000597396 MTF1Q14872 753 aa20.63■□□□□ 0.89
SHKBP1-214ENST00000597396 ZNF77Q15935 545 aa20.63■□□□□ 0.89
SHKBP1-214ENST00000597396 RSRC2Q7L4I2 434 aaKnown RBP20.63■□□□□ 0.89
SHKBP1-214ENST00000597396 DDX42Q86XP3 938 aaKnown RBP eCLIP20.63■□□□□ 0.89
SHKBP1-214ENST00000597396 TMEM35BQ8NCS4 154 aa20.63■□□□□ 0.89
SHKBP1-214ENST00000597396 IRGQQ8WZA9 623 aa20.63■□□□□ 0.89
SHKBP1-214ENST00000597396 DDX1Q92499 740 aaKnown RBP20.63■□□□□ 0.89
SHKBP1-214ENST00000597396 GOLGA1Q92805 767 aa20.63■□□□□ 0.89
SHKBP1-214ENST00000597396 NUDT5Q9UKK9 219 aa20.63■□□□□ 0.89
SHKBP1-214ENST00000597396 COL4A2P08572 1712 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 E5RJQ4 531 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 LEFTY2O00292 366 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 SART1O43290 800 aaKnown RBP20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 TBX18O95935 607 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 MMEP08473 750 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 TCF3P15923 654 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 PBX1P40424 430 aa20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 RPL34P49207 117 aaKnown RBP20.62■□□□□ 0.89
SHKBP1-214ENST00000597396 SNX16P57768 344 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms