RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 ACO1P21399 889 aaKnown RBP23.9■■□□□ 1.42
PABPN1-207ENST00000556821 TUBP50607 506 aa23.9■■□□□ 1.42
PABPN1-207ENST00000556821 PDGFRLQ15198 375 aa23.9■■□□□ 1.42
PABPN1-207ENST00000556821 EML3Q32P44 896 aa23.9■■□□□ 1.42
PABPN1-207ENST00000556821 C1orf228Q6PIY5 440 aa23.9■■□□□ 1.42
PABPN1-207ENST00000556821 ARHGEF19Q8IW93 802 aa23.9■■□□□ 1.42
PABPN1-207ENST00000556821 ZBTB44Q8NCP5 570 aa23.9■■□□□ 1.42
PABPN1-207ENST00000556821 ZFRQ96KR1 1074 aaKnown RBP23.9■■□□□ 1.42
PABPN1-207ENST00000556821 RTKNQ9BST9 563 aa23.9■■□□□ 1.42
PABPN1-207ENST00000556821 CHRDQ9H2X0 955 aa23.9■■□□□ 1.42
PABPN1-207ENST00000556821 CCSER2Q9H7U1 834 aa23.9■■□□□ 1.42
PABPN1-207ENST00000556821 DUS2Q9NX74 493 aaKnown RBP23.9■■□□□ 1.42
PABPN1-207ENST00000556821 CYP26A1O43174 497 aa23.89■■□□□ 1.41
PABPN1-207ENST00000556821 LILRB5O75023 590 aa23.89■■□□□ 1.41
PABPN1-207ENST00000556821 MBL2P11226 248 aaPredicted RBP23.89■■□□□ 1.41
PABPN1-207ENST00000556821 YWHAEP62258 255 aaKnown RBP23.89■■□□□ 1.41
PABPN1-207ENST00000556821 PON2Q15165 354 aa23.89■■□□□ 1.41
PABPN1-207ENST00000556821 HECTD3Q5T447 861 aa23.89■■□□□ 1.41
PABPN1-207ENST00000556821 TTC30AQ86WT1 665 aa23.89■■□□□ 1.41
PABPN1-207ENST00000556821 PPM1KQ8N3J5 372 aa23.89■■□□□ 1.41
PABPN1-207ENST00000556821 LMAN1LQ9HAT1 526 aa23.89■■□□□ 1.41
PABPN1-207ENST00000556821 SPATA6Q9NWH7 488 aaPredicted RBP23.89■■□□□ 1.41
PABPN1-207ENST00000556821 OSER1Q9NX31 292 aa23.89■■□□□ 1.41
PABPN1-207ENST00000556821 SCML2Q9UQR0 700 aa23.89■■□□□ 1.41
PABPN1-207ENST00000556821 PCDHGA2Q9Y5H1 932 aa23.89■■□□□ 1.41
PABPN1-207ENST00000556821 DCDC2BA2VCK2 349 aa23.88■■□□□ 1.41
PABPN1-207ENST00000556821 IFNAR2P48551 515 aa23.88■■□□□ 1.41
PABPN1-207ENST00000556821 KIF11P52732 1056 aa23.88■■□□□ 1.41
PABPN1-207ENST00000556821 LMNB2Q03252 620 aa23.88■■□□□ 1.41
PABPN1-207ENST00000556821 CETN1Q12798 172 aa23.88■■□□□ 1.41
PABPN1-207ENST00000556821 EHBP1Q8NDI1 1231 aa23.88■■□□□ 1.41
PABPN1-207ENST00000556821 LINC00597Q9H2U6 94 aa23.88■■□□□ 1.41
PABPN1-207ENST00000556821 ECT2Q9H8V3 914 aa23.88■■□□□ 1.41
PABPN1-207ENST00000556821 NMUR1Q9HB89 426 aa23.88■■□□□ 1.41
PABPN1-207ENST00000556821 RBM12Q9NTZ6 932 aaKnown RBP23.88■■□□□ 1.41
PABPN1-207ENST00000556821 NCDNQ9UBB6 729 aa23.88■■□□□ 1.41
PABPN1-207ENST00000556821 MTAPQ13126 283 aa23.87■■□□□ 1.41
PABPN1-207ENST00000556821 GAS6Q14393 721 aa23.87■■□□□ 1.41
PABPN1-207ENST00000556821 GOLGA7BQ2TAP0 167 aa23.87■■□□□ 1.41
PABPN1-207ENST00000556821 NAIF1Q69YI7 327 aaPredicted RBP23.87■■□□□ 1.41
PABPN1-207ENST00000556821 PIGZQ86VD9 579 aa23.87■■□□□ 1.41
PABPN1-207ENST00000556821 ANKRD52Q8NB46 1076 aa23.87■■□□□ 1.41
PABPN1-207ENST00000556821 KREMEN1Q96MU8 473 aa23.87■■□□□ 1.41
PABPN1-207ENST00000556821 INTS2Q9H0H0 1204 aaKnown RBP23.87■■□□□ 1.41
PABPN1-207ENST00000556821 EPC1Q9H2F5 836 aa23.87■■□□□ 1.41
PABPN1-207ENST00000556821 CYLDQ9NQC7 956 aa23.87■■□□□ 1.41
PABPN1-207ENST00000556821 TLR8Q9NR97 1041 aaKnown RBP23.87■■□□□ 1.41
PABPN1-207ENST00000556821 CFAP97Q9P2B7 532 aa23.87■■□□□ 1.41
PABPN1-207ENST00000556821 TSPAN16Q9UKR8 245 aa23.87■■□□□ 1.41
PABPN1-207ENST00000556821 USP3Q9Y6I4 520 aa23.87■■□□□ 1.41
PABPN1-207ENST00000556821 CFAP47Q6ZTR5 3102 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 RNF225M0QZC1 329 aaPredicted RBP23.86■■□□□ 1.41
PABPN1-207ENST00000556821 SCAMP3O14828 347 aaKnown RBP23.86■■□□□ 1.41
PABPN1-207ENST00000556821 TLR5O60602 858 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 CD19P15391 556 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 GJA4P35212 333 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 GCNT1Q02742 428 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 CCINQ13939 588 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 SGO2Q562F6 1265 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 TMEM270Q6UE05 265 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 RBM43Q6ZSC3 357 aaKnown RBP23.86■■□□□ 1.41
PABPN1-207ENST00000556821 RRAGAQ7L523 313 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 CCDC186Q7Z3E2 898 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 CPA6Q8N4T0 437 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 KIAA1958Q8N8K9 716 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 TFAP2BQ92481 460 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 ATP2A3Q93084 1043 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 ZSWIM1Q9BR11 485 aa23.86■■□□□ 1.41
PABPN1-207ENST00000556821 TULP2O00295 520 aa23.85■■□□□ 1.41
PABPN1-207ENST00000556821 O00370 1275 aa23.85■■□□□ 1.41
PABPN1-207ENST00000556821 VDRP11473 427 aa23.85■■□□□ 1.41
PABPN1-207ENST00000556821 ERCC5P28715 1186 aaPredicted RBP23.85■■□□□ 1.41
PABPN1-207ENST00000556821 GAB4Q2WGN9 574 aa23.85■■□□□ 1.41
PABPN1-207ENST00000556821 TMEM196Q5HYL7 178 aa23.85■■□□□ 1.41
PABPN1-207ENST00000556821 RAB41Q5JT25 222 aa23.85■■□□□ 1.41
PABPN1-207ENST00000556821 FSTL4Q6MZW2 842 aa23.85■■□□□ 1.41
PABPN1-207ENST00000556821 Q6ZS52 159 aa23.85■■□□□ 1.41
PABPN1-207ENST00000556821 SCD5Q86SK9 330 aa23.85■■□□□ 1.41
PABPN1-207ENST00000556821 WBP2Q969T9 261 aa23.85■■□□□ 1.41
PABPN1-207ENST00000556821 PRMT8Q9NR22 394 aaPredicted RBP23.85■■□□□ 1.41
PABPN1-207ENST00000556821 CDV3Q9UKY7 258 aaKnown RBP23.85■■□□□ 1.41
PABPN1-207ENST00000556821 PCDHB4Q9Y5E5 795 aa23.85■■□□□ 1.41
PABPN1-207ENST00000556821 SPAG17Q6Q759 2223 aa23.84■■□□□ 1.41
PABPN1-207ENST00000556821 A0A1W2PQH9 124 aa23.84■■□□□ 1.41
PABPN1-207ENST00000556821 TRDMT1O14717 391 aaKnown RBP23.84■■□□□ 1.41
PABPN1-207ENST00000556821 LAMTOR5O43504 91 aa23.84■■□□□ 1.41
PABPN1-207ENST00000556821 CALCAP01258 141 aa23.84■■□□□ 1.41
PABPN1-207ENST00000556821 PAEPP09466 180 aa23.84■■□□□ 1.41
PABPN1-207ENST00000556821 ZNF132P52740 706 aa23.84■■□□□ 1.41
PABPN1-207ENST00000556821 BCAT1P54687 386 aa23.84■■□□□ 1.41
PABPN1-207ENST00000556821 PDE4CQ08493 712 aa23.84■■□□□ 1.41
PABPN1-207ENST00000556821 LRRC32Q14392 662 aa23.84■■□□□ 1.41
PABPN1-207ENST00000556821 PKDCCQ504Y2 493 aa23.84■■□□□ 1.41
PABPN1-207ENST00000556821 DDX42Q86XP3 938 aaKnown RBP eCLIP23.84■■□□□ 1.415e-9■■■■□ 23
PABPN1-207ENST00000556821 IER2Q9BTL4 223 aa23.84■■□□□ 1.41
PABPN1-207ENST00000556821 UBXN6Q9BZV1 441 aa23.84■■□□□ 1.41
PABPN1-207ENST00000556821 THAP9Q9H5L6 903 aa23.84■■□□□ 1.41
PABPN1-207ENST00000556821 FBRSL1Q9HCM7 1045 aaKnown RBP23.84■■□□□ 1.41
PABPN1-207ENST00000556821 PARD6AQ9NPB6 346 aa23.84■■□□□ 1.41
PABPN1-207ENST00000556821 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms