RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 HPS4Q9NQG7 708 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 FBXO4Q9UKT5 387 aa10.29□□□□□ -0.76
TNFRSF1A-214ENST00000543048 OTOL1A6NHN0 477 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 HHLA1C9JL84 531 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 OLFM2O95897 454 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CCDC192P0DO97 292 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MBL2P11226 248 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ARSAP15289 507 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TBXAS1P24557 533 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 RAD23BP54727 409 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ZXDBP98169 803 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CSTF1Q05048 431 aaKnown RBP10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 KCNH2Q12809 1159 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 LRMPQ12912 555 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 USP4Q13107 963 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MTAPQ13126 283 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CUL2Q13617 745 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 PON2Q15165 354 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 NFKBIBQ15653 356 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 EML3Q32P44 896 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TXNDC11Q6PKC3 985 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CLEC20AQ6ZU45 233 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 DDX42Q86XP3 938 aaKnown RBP eCLIP10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CPA6Q8N4T0 437 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MLKLQ8NB16 471 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 EHBP1Q8NDI1 1231 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ATP2A3Q93084 1043 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 EXOC4Q96A65 974 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SEMA4AQ9H3S1 761 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CLSTN2Q9H4D0 955 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 ECT2Q9H8V3 914 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 PNPLA8Q9NP80 782 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TLR8Q9NR97 1041 aaKnown RBP10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 RWDD2AQ9UIY3 292 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 KIAA1257Q9ULG3 409 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 SCML2Q9UQR0 700 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 VPS9D1Q9Y2B5 631 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 CPQQ9Y646 472 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 MYO15AQ9UKN7 3530 aa10.28□□□□□ -0.76
TNFRSF1A-214ENST00000543048 TRDMT1O14717 391 aaKnown RBP10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SLC9A3R1O14745 358 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 PTMSP20962 102 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ACO1P21399 889 aaKnown RBP10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 GJA4P35212 333 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 CXCL12P48061 93 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 TUBP50607 506 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 GALK1P51570 392 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 KIF11P52732 1056 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 MARSP56192 900 aaKnown RBP10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SLC8A3P57103 927 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 GRSF1Q12849 480 aaKnown RBP eCLIP10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ARHGAP17Q68EM7 881 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 TRIM59Q8IWR1 403 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ADGRG2Q8IZP9 1017 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SPEM1Q8N4L4 309 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ANKRD52Q8NB46 1076 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 LMO3Q8TAP4 145 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 NKD2Q969F2 451 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 NT5C1BQ96P26 610 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ARID3AQ99856 593 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 CCSER2Q9H7U1 834 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 LMBRD1Q9NUN5 540 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 GMIPQ9P107 970 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 WNT6Q9Y6F9 365 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SPAG17Q6Q759 2223 aa10.27□□□□□ -0.77
TNFRSF1A-214ENST00000543048 E2F8A0AVK6 867 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 COCHO43405 550 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 GFRA3O60609 400 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 NFATC1O95644 943 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 AFPP02771 609 aaKnown RBP10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 VDRP11473 427 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 DRD1P21728 446 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 CCR3P51677 355 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 NRLP54845 237 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 CCINQ13939 588 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 PPP2R5DQ14738 602 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SGO2Q562F6 1265 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 TMEM196Q5HYL7 178 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ZC3H14Q6PJT7 736 aaKnown RBP10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 CREBRFQ8IUR6 639 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 UBR7Q8N806 425 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ATRIPQ8WXE1 791 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 JAKMIP2Q96AA8 810 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 FAM126AQ9BYI3 521 aaPredicted RBP10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 NACA2Q9H009 215 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 RBM12Q9NTZ6 932 aaKnown RBP10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SMPD4Q9NXE4 827 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 CFAP97Q9P2B7 532 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 TBC1D14Q9P2M4 693 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 PCDHB4Q9Y5E5 795 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 USP3Q9Y6I4 520 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 R4GN57 208 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 KIAA1549LQ6ZVL6 1849 aa10.26□□□□□ -0.77
TNFRSF1A-214ENST00000543048 EP300Q09472 2414 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF1A-214ENST00000543048 SDK1Q7Z5N4 2213 aa10.25□□□□□ -0.77
TNFRSF1A-214ENST00000543048 ZNF292O60281 2723 aa10.25□□□□□ -0.77
TNFRSF1A-214ENST00000543048 TLR5O60602 858 aa10.25□□□□□ -0.77
TNFRSF1A-214ENST00000543048 PAEPP09466 180 aa10.25□□□□□ -0.77
TNFRSF1A-214ENST00000543048 CD19P15391 556 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms