RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 CBSP35520 551 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 CASP5P51878 434 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 AK2P54819 239 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 ZNF543Q08ER8 600 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 HDAC1Q13547 482 aaPredicted RBP4.42□□□□□ -1.7
HDAC2-208ENST00000520746 DAG1Q14118 895 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 PLA1AQ53H76 456 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 ARHGAP40Q5TG30 622 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 VPS53Q5VIR6 699 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 SLC2A7Q6PXP3 512 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 ZDHHC24Q6UX98 284 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 ZNF280BQ86YH2 543 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 LIX1LQ8IVB5 337 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.42□□□□□ -1.7
HDAC2-208ENST00000520746 CCDC33Q8N5R6 958 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 SVIPQ8NHG7 77 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 MSLNLQ96KJ4 702 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 TNIP3Q96KP6 325 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 OSBPL9Q96SU4 736 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 MESP1Q9BRJ9 268 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 TPSD1Q9BZJ3 242 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 AMBRA1Q9C0C7 1298 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 SPRTNQ9H040 489 aaPredicted RBP4.42□□□□□ -1.7
HDAC2-208ENST00000520746 SLC52A1Q9NWF4 448 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 ELOVL5Q9NYP7 299 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 DKK3Q9UBP4 350 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 HDAC9Q9UKV0 1011 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 MRPS17Q9Y2R5 130 aaKnown RBP4.42□□□□□ -1.7
HDAC2-208ENST00000520746 KIAA0556O60303 1618 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 CNTNAP2Q9UHC6 1331 aa4.42□□□□□ -1.7
HDAC2-208ENST00000520746 AKNAQ7Z591 1439 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 ZFXP17010 805 aaPredicted RBP4.41□□□□□ -1.7
HDAC2-208ENST00000520746 LRPAP1P30533 357 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 STT3AP46977 705 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 CARSP49589 748 aaKnown RBP4.41□□□□□ -1.7
HDAC2-208ENST00000520746 UBE4AQ14139 1066 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 E2F2Q14209 437 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 MGAT5BQ3V5L5 792 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 SFRP4Q6FHJ7 346 aaPredicted RBP4.41□□□□□ -1.7
HDAC2-208ENST00000520746 CEP85Q6P2H3 762 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 UNC13DQ70J99 1090 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 GAS2L3Q86XJ1 694 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 FKBP10Q96AY3 582 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 FAM136AQ96C01 138 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 SNX22Q96L94 193 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 PPP1R9BQ96SB3 815 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 NELL2Q99435 816 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 MYD88Q99836 296 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 PTDSS2Q9BVG9 487 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 ACTRT3Q9BYD9 372 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 CHST8Q9H2A9 424 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 SERTAD4Q9NUC0 356 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 TBC1D23Q9NUY8 699 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 EHD3Q9NZN3 535 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 SH3BP4Q9P0V3 963 aa4.41□□□□□ -1.7
HDAC2-208ENST00000520746 NDRG4Q9ULP0 352 aaKnown RBP4.41□□□□□ -1.7
HDAC2-208ENST00000520746 PCF11O94913 1555 aaKnown RBP4.4□□□□□ -1.7
HDAC2-208ENST00000520746 JTBO76095 146 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 MT-ND5P03915 603 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 TXNP10599 105 aaKnown RBP4.4□□□□□ -1.71
HDAC2-208ENST00000520746 IL1R1P14778 569 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 JUPP14923 745 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 ALDH5A1P51649 535 aaPredicted RBP4.4□□□□□ -1.71
HDAC2-208ENST00000520746 PRKAG1P54619 331 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 MYO1EQ12965 1108 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 RAPGEF1Q13905 1077 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 SLC29A2Q14542 456 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 BRD3Q15059 726 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 ZIK1Q3SY52 487 aaPredicted RBP4.4□□□□□ -1.71
HDAC2-208ENST00000520746 KLHDC7AQ5VTJ3 777 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 ICE2Q659A1 982 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 RGS7BPQ6MZT1 257 aaPredicted RBP4.4□□□□□ -1.71
HDAC2-208ENST00000520746 SRLQ86TD4 932 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 AFAP1Q8N556 730 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 PPP2R3CQ969Q6 453 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 CCDC138Q96M89 665 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 RIPOR3Q96MK2 946 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 ELAC2Q9BQ52 826 aaKnown RBP4.4□□□□□ -1.71
HDAC2-208ENST00000520746 SERHLQ9NQF3 203 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 MID2Q9UJV3 735 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 SERTAD3Q9UJW9 196 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 FANCAO15360 1455 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 NEO1Q92859 1461 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 CFAP43Q8NDM7 1665 aa4.4□□□□□ -1.71
HDAC2-208ENST00000520746 SCAPERQ9BY12 1400 aa4.39□□□□□ -1.71
HDAC2-208ENST00000520746 H7C4K7 107 aa4.39□□□□□ -1.71
HDAC2-208ENST00000520746 RAB27BO00194 218 aa4.39□□□□□ -1.71
HDAC2-208ENST00000520746 ZNF213O14771 459 aa4.39□□□□□ -1.71
HDAC2-208ENST00000520746 PPM1DO15297 605 aa4.39□□□□□ -1.71
HDAC2-208ENST00000520746 TUBB4AP04350 444 aa4.39□□□□□ -1.71
HDAC2-208ENST00000520746 ANXA2P07355 339 aaKnown RBP4.39□□□□□ -1.71
HDAC2-208ENST00000520746 TKTP29401 623 aaKnown RBP4.39□□□□□ -1.71
HDAC2-208ENST00000520746 NR4A2P43354 598 aa4.39□□□□□ -1.71
HDAC2-208ENST00000520746 DGKEP52429 567 aa4.39□□□□□ -1.71
HDAC2-208ENST00000520746 ITGA8P53708 1063 aa4.39□□□□□ -1.71
HDAC2-208ENST00000520746 HTRA4P83105 476 aaPredicted RBP4.39□□□□□ -1.71
HDAC2-208ENST00000520746 ARHGEF7Q14155 803 aa4.39□□□□□ -1.71
HDAC2-208ENST00000520746 INSCQ1MX18 579 aa4.39□□□□□ -1.71
HDAC2-208ENST00000520746 PLAC9Q5JTB6 97 aa4.39□□□□□ -1.71
HDAC2-208ENST00000520746 FAM209BQ5JX69 171 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms