RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 DDX42Q86XP3 938 aaKnown RBP eCLIP25.42■■□□□ 1.66
SRPK1-210ENST00000508473 UBXN6Q9BZV1 441 aa25.42■■□□□ 1.66
SRPK1-210ENST00000508473 UBE2TQ9NPD8 197 aaPredicted RBP25.42■■□□□ 1.66
SRPK1-210ENST00000508473 NAGPAQ9UK23 515 aa25.42■■□□□ 1.66
SRPK1-210ENST00000508473 KIAA1257Q9ULG3 409 aa25.42■■□□□ 1.66
SRPK1-210ENST00000508473 USP3Q9Y6I4 520 aa25.42■■□□□ 1.66
SRPK1-210ENST00000508473 MDM4O15151 490 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 NFATC1O95644 943 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 PAEPP09466 180 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 RARGP13631 454 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 BRD2P25440 801 aaKnown RBP25.41■■□□□ 1.66
SRPK1-210ENST00000508473 BCAT1P54687 386 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 AMPD2Q01433 879 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 GAS6Q14393 721 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 FSTL4Q6MZW2 842 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 GJB7Q6PEY0 223 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 TSSK4Q6SA08 328 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 CCDC186Q7Z3E2 898 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 WBP2Q969T9 261 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 ZSWIM1Q9BR11 485 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 FBRSL1Q9HCM7 1045 aaKnown RBP25.41■■□□□ 1.66
SRPK1-210ENST00000508473 CYLDQ9NQC7 956 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 SH3BP1Q9Y3L3 701 aa25.41■■□□□ 1.66
SRPK1-210ENST00000508473 PATJQ8NI35 1801 aa25.4■■□□□ 1.66
SRPK1-210ENST00000508473 HELZP42694 1942 aaKnown RBP25.4■■□□□ 1.66
SRPK1-210ENST00000508473 KRT5P13647 590 aa25.4■■□□□ 1.66
SRPK1-210ENST00000508473 SLC9A1P19634 815 aa25.4■■□□□ 1.66
SRPK1-210ENST00000508473 GALK1P51570 392 aa25.4■■□□□ 1.66
SRPK1-210ENST00000508473 TKTL1P51854 596 aa25.4■■□□□ 1.66
SRPK1-210ENST00000508473 APBA1Q02410 837 aa25.4■■□□□ 1.66
SRPK1-210ENST00000508473 BST2Q10589 180 aaKnown RBP25.4■■□□□ 1.66
SRPK1-210ENST00000508473 NR1H3Q13133 447 aa25.4■■□□□ 1.66
SRPK1-210ENST00000508473 DGKKQ5KSL6 1271 aa25.4■■□□□ 1.66
SRPK1-210ENST00000508473 GBP6Q6ZN66 633 aa25.4■■□□□ 1.66
SRPK1-210ENST00000508473 FAM114A1Q8IWE2 563 aa25.4■■□□□ 1.66
SRPK1-210ENST00000508473 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.4■■□□□ 1.66
SRPK1-210ENST00000508473 R4GN57 208 aa25.4■■□□□ 1.66
SRPK1-210ENST00000508473 TRDMT1O14717 391 aaKnown RBP25.39■■□□□ 1.66
SRPK1-210ENST00000508473 SLC9A3R1O14745 358 aaPredicted RBP25.39■■□□□ 1.66
SRPK1-210ENST00000508473 XPO1O14980 1071 aaKnown RBP25.39■■□□□ 1.66
SRPK1-210ENST00000508473 HOXD11P31277 338 aaPredicted RBP25.39■■□□□ 1.66
SRPK1-210ENST00000508473 ATP5C1P36542 298 aaKnown RBP25.39■■□□□ 1.66
SRPK1-210ENST00000508473 NBL1P41271 181 aa25.39■■□□□ 1.66
SRPK1-210ENST00000508473 GRSF1Q12849 480 aaKnown RBP eCLIP25.39■■□□□ 1.66
SRPK1-210ENST00000508473 CCINQ13939 588 aa25.39■■□□□ 1.66
SRPK1-210ENST00000508473 TMEM196Q5HYL7 178 aa25.39■■□□□ 1.66
SRPK1-210ENST00000508473 RAB41Q5JT25 222 aa25.39■■□□□ 1.66
SRPK1-210ENST00000508473 C10orf120Q5SQS8 335 aa25.39■■□□□ 1.66
SRPK1-210ENST00000508473 TRIM65Q6PJ69 517 aa25.39■■□□□ 1.66
SRPK1-210ENST00000508473 LCLAT1Q6UWP7 414 aa25.39■■□□□ 1.66
SRPK1-210ENST00000508473 NDRG1Q92597 394 aaKnown RBP25.39■■□□□ 1.66
SRPK1-210ENST00000508473 P2RY13Q9BPV8 354 aa25.39■■□□□ 1.66
SRPK1-210ENST00000508473 KLF16Q9BXK1 252 aaPredicted RBP25.39■■□□□ 1.66
SRPK1-210ENST00000508473 LRRC4Q9HBW1 653 aa25.39■■□□□ 1.66
SRPK1-210ENST00000508473 SAMSN1Q9NSI8 373 aaKnown RBP25.39■■□□□ 1.66
SRPK1-210ENST00000508473 E2F8A0AVK6 867 aa25.38■■□□□ 1.65
SRPK1-210ENST00000508473 EGFP01133 1207 aa25.38■■□□□ 1.65
SRPK1-210ENST00000508473 CYP17A1P05093 508 aa25.38■■□□□ 1.65
SRPK1-210ENST00000508473 PRKCSHP14314 528 aaPredicted RBP25.38■■□□□ 1.65
SRPK1-210ENST00000508473 ZNF132P52740 706 aa25.38■■□□□ 1.65
SRPK1-210ENST00000508473 MAN2A1Q16706 1144 aa25.38■■□□□ 1.65
SRPK1-210ENST00000508473 EXOC3L4Q17RC7 722 aa25.38■■□□□ 1.65
SRPK1-210ENST00000508473 RBM43Q6ZSC3 357 aaKnown RBP25.38■■□□□ 1.65
SRPK1-210ENST00000508473 ADGRG2Q8IZP9 1017 aa25.38■■□□□ 1.65
SRPK1-210ENST00000508473 ULBP1Q9BZM6 244 aa25.38■■□□□ 1.65
SRPK1-210ENST00000508473 FBXO4Q9UKT5 387 aa25.38■■□□□ 1.65
SRPK1-210ENST00000508473 MYO16Q9Y6X6 1858 aa25.38■■□□□ 1.65
SRPK1-210ENST00000508473 M0QYV0 167 aa25.37■■□□□ 1.65
SRPK1-210ENST00000508473 RALAP11233 206 aa25.37■■□□□ 1.65
SRPK1-210ENST00000508473 RGS7P49802 495 aa25.37■■□□□ 1.65
SRPK1-210ENST00000508473 SATB1Q01826 763 aa25.37■■□□□ 1.65
SRPK1-210ENST00000508473 DHCR24Q15392 516 aa25.37■■□□□ 1.65
SRPK1-210ENST00000508473 CNGA2Q16280 664 aa25.37■■□□□ 1.65
SRPK1-210ENST00000508473 PKDCCQ504Y2 493 aa25.37■■□□□ 1.65
SRPK1-210ENST00000508473 BBS7Q8IWZ6 715 aa25.37■■□□□ 1.65
SRPK1-210ENST00000508473 KIAA1958Q8N8K9 716 aa25.37■■□□□ 1.65
SRPK1-210ENST00000508473 CD101Q93033 1021 aa25.37■■□□□ 1.65
SRPK1-210ENST00000508473 SECISBP2LQ93073 1101 aaKnown RBP25.37■■□□□ 1.65
SRPK1-210ENST00000508473 IER2Q9BTL4 223 aa25.37■■□□□ 1.65
SRPK1-210ENST00000508473 PRMT8Q9NR22 394 aaPredicted RBP25.37■■□□□ 1.65
SRPK1-210ENST00000508473 TBC1D14Q9P2M4 693 aa25.37■■□□□ 1.65
SRPK1-210ENST00000508473 DNMT3LQ9UJW3 386 aa25.37■■□□□ 1.65
SRPK1-210ENST00000508473 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.37■■□□□ 1.65
SRPK1-210ENST00000508473 ZBED1O96006 694 aa25.36■■□□□ 1.65
SRPK1-210ENST00000508473 SETSIPP0DME0 302 aa25.36■■□□□ 1.65
SRPK1-210ENST00000508473 PON1P27169 355 aa25.36■■□□□ 1.65
SRPK1-210ENST00000508473 PLA2G4AP47712 749 aa25.36■■□□□ 1.65
SRPK1-210ENST00000508473 PSEN1P49768 467 aa25.36■■□□□ 1.65
SRPK1-210ENST00000508473 MFAP3P55082 362 aa25.36■■□□□ 1.65
SRPK1-210ENST00000508473 ADIGQ0VDE8 80 aa25.36■■□□□ 1.65
SRPK1-210ENST00000508473 ARHGAP44Q17R89 818 aa25.36■■□□□ 1.65
SRPK1-210ENST00000508473 VWA3BQ502W6 1294 aa25.36■■□□□ 1.65
SRPK1-210ENST00000508473 CT47A1Q5JQC4 288 aaPredicted RBP25.36■■□□□ 1.65
SRPK1-210ENST00000508473 RHBDF2Q6PJF5 856 aa25.36■■□□□ 1.65
SRPK1-210ENST00000508473 MIB1Q86YT6 1006 aa25.36■■□□□ 1.65
SRPK1-210ENST00000508473 SPEM1Q8N4L4 309 aa25.36■■□□□ 1.65
SRPK1-210ENST00000508473 TUBGCP2Q9BSJ2 902 aa25.36■■□□□ 1.65
SRPK1-210ENST00000508473 CLIC5Q9NZA1 410 aa25.36■■□□□ 1.65
SRPK1-210ENST00000508473 KCNJ18B7U540 433 aa25.35■■□□□ 1.65
SRPK1-210ENST00000508473 PIK3R2O00459 728 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms