RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 MEFVO15553 781 aaPredicted RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 CSDE1O75534 798 aaKnown RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 LCA5LO95447 670 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 VNN1O95497 513 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 NPTXRO95502 500 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 EFEMP2O95967 443 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 ASS1P00966 412 aaKnown RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 TNNC2P02585 160 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 SERPING1P05155 500 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 TRIM49P0CI25 452 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 TRIM49CP0CI26 452 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 SKILP12757 684 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 NME1P15531 152 aaKnown RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 FERP16591 822 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 TBXAS1P24557 533 aaPredicted RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 LRPAP1P30533 357 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 GBP1P32455 592 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 RFC2P35250 354 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 ETV3P41162 512 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 TNFSF9P41273 254 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 STAT1P42224 750 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 MFAP3P55082 362 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 ADKP55263 362 aaKnown RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 CHMP4BP1P59074 171 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 POLR2FP61218 127 aaKnown RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 RBP5P82980 135 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 TMEM62Q0P6H9 643 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 PAK2Q13177 524 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 GPNMBQ14956 572 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 ASTE1Q2TB18 679 aaPredicted RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 PLEKHG4Q58EX7 1191 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 ZBTB41Q5SVQ8 909 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 TDRD10Q5VZ19 366 aaKnown RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 WDR59Q6PJI9 974 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 CCDC81Q6ZN84 652 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 SLC24A5Q71RS6 500 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 LRRC8DQ7L1W4 858 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 DPH6Q7L8W6 267 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 CACNA2D4Q7Z3S7 1137 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 IRF2BP2Q7Z5L9 587 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 TMC3Q7Z5M5 1100 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 NECAB2Q7Z6G3 386 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 UBE2Q1Q7Z7E8 422 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 RTN4RL1Q86UN2 441 aaPredicted RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 ZSCAN30Q86W11 494 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 CREG2Q8IUH2 290 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 EFCAB13Q8IY85 973 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 TTC39CQ8N584 583 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 LRRC52Q8N7C0 313 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 BEST2Q8NFU1 509 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 CXorf38Q8TB03 319 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 TAS1R2Q8TE23 839 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 RNF141Q8WVD5 230 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 SEMA4DQ92854 862 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 SNX27Q96L92 541 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 NT5C1BQ96P26 610 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 BAG1Q99933 345 aaPredicted RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 CRACR2AQ9BSW2 395 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 EIF2AQ9BY44 585 aaKnown RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 INTS2Q9H0H0 1204 aaKnown RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 C11orf49Q9H6J7 331 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 CYP3A43Q9HB55 503 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 SP110Q9HB58 689 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 METTL5Q9NRN9 209 aaKnown RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 FAM207AQ9NSI2 230 aaPredicted RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 SNTG2Q9NY99 539 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.87□□□□□ -1.47
VPS41-211ENST00000466017 GMIPQ9P107 970 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 GCNT4Q9P109 453 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 DNAJC12Q9UKB3 198 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 ITGA11Q9UKX5 1188 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 PIN4Q9Y237 131 aaKnown RBP5.87□□□□□ -1.47
VPS41-211ENST00000466017 GINS2Q9Y248 185 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 RNF114Q9Y508 228 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 IPPQ9Y573 584 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 ATP8B3O60423 1300 aa5.87□□□□□ -1.47
VPS41-211ENST00000466017 SMIM28A0A1B0GU29 152 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 EIF3CLB5ME19 914 aaKnown RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 PIRO00625 290 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 SCAMP3O14828 347 aaKnown RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 KIAA0355O15063 1070 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 CCP110O43303 1012 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 ZNF500O60304 480 aaPredicted RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 HLA-DRAP01903 254 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 PFKMP08237 780 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 TMEM191BP0C7N4 346 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 CXCL8P10145 99 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 DLATP10515 647 aaKnown RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 ITGA4P13612 1032 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 FGFR4P22455 802 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 CD52P31358 61 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 RPL9P32969 192 aaKnown RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 TRHRP34981 398 aaPredicted RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 CYLC1P35663 651 aaPredicted RBP5.86□□□□□ -1.47
VPS41-211ENST00000466017 SOX5P35711 763 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 PNPLA4P41247 253 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 KLK7P49862 253 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 BPIFB4P59827 614 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 TLE2Q04725 743 aa5.86□□□□□ -1.47
VPS41-211ENST00000466017 TRPC3Q13507 836 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms