RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 TRMT112Q9UI30 125 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ZNF214Q9UL59 606 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 SNX11Q9Y5W9 270 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ANKRD36CQ5JPF3 1778 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 NBPF19A0A087WUL8 3843 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 ROCK2O75116 1388 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 A0A1W2PQ45 241 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 A0A1W2PQY0 241 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 GOLGA8AA7E2F4 631 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 GOLGA8BA8MQT2 603 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 CACNB4O00305 520 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 TXNL1O43396 289 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 SOCS5O75159 536 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 DAB1O75553 588 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 DDHD2O94830 711 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 ENDOD1O94919 500 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 FSBPO95073 299 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 PGK1P00558 417 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 POLBP06746 335 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 SNRPA1P09661 255 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 JMJD7P0C870 316 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 IL11P20809 199 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 TNFSF4P23510 183 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 C21orf58P58505 322 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 NLRP5P59047 1200 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 AUHQ13825 339 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 CEP55Q53EZ4 464 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 KRBOX4Q5JUW0 171 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 ATAT1Q5SQI0 421 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 APOA5Q6Q788 366 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 VHLLQ6RSH7 139 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 LMBR1LQ6UX01 489 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 THAP5Q7Z6K1 395 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 LRRTM4Q86VH4 590 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 CREG2Q8IUH2 290 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 PLD6Q8N2A8 252 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 LRRC43Q8N309 656 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 DTWD2Q8NBA8 298 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 PCSK9Q8NBP7 692 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 ARRDC4Q8NCT1 418 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 ASB12Q8WXK4 309 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 ZC3H10Q96K80 434 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 SLC7A5P2Q9GIP4 190 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 ASCC2Q9H1I8 757 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 PDCL3Q9H2J4 239 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 SMOC1Q9H4F8 434 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 ARHGEF4Q9NR80 690 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 VPS45Q9NRW7 570 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 RXFP3Q9NSD7 469 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 TBCCD1Q9NVR7 557 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 PSD3Q9NYI0 1048 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 TBC1D29Q9UFV1 150 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 ZC3H7BQ9UGR2 993 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 POLHQ9Y253 713 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 PCDHGB6Q9Y5F9 930 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 ZHX2Q9Y6X8 837 aa3.77□□□□□ -1.81
ECHDC1-205ENST00000368295 NCANO14594 1321 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 SH3TC1Q8TE82 1336 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 M0R2C6 588 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 UBXN8O00124 270 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 AP3B1O00203 1094 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 DAPK3O43293 454 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 STX6O43752 255 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 DOK2O60496 412 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 TUSC2O75896 110 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ADRB2P07550 413 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 MAPK3P27361 379 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PBLDP30039 288 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 SKIV2L2P42285 1042 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PRIM2P49643 509 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 TKTL1P51854 596 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ARF3P61204 181 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ARF1P84077 181 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 SHC2P98077 582 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ADCY2Q08462 1091 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 BFSP1Q12934 665 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 KRT32Q14532 448 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 CNGA3Q16281 694 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 MSMPQ1L6U9 139 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 COL28A1Q2UY09 1125 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 GNPTABQ3T906 1256 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 TDRD10Q5VZ19 366 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 SYDE1Q6ZW31 735 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 BRAPQ7Z569 592 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 DNAJB7Q7Z6W7 309 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 PPFIBP1Q86W92 1011 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 HEATR4Q86WZ0 1026 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 SPACA3Q8IXA5 215 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 RPAP2Q8IXW5 612 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 CCDC13Q8IYE1 715 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 CACNA2D3Q8IZS8 1091 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 TMCO5AQ8N6Q1 288 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ZNF527Q8NB42 609 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 SUMF1Q8NBK3 374 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ZFAND2BQ8WV99 257 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 ZCCHC14Q8WYQ9 949 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 SHC3Q92529 594 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 KIAA1191Q96A73 305 aa3.76□□□□□ -1.81
ECHDC1-205ENST00000368295 NSUN4Q96CB9 384 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms