RNA–Protein interactions for RNA: YPR095C

SYT1, Transcript of Guanine nucleotide exchange factor (GEF) for Arf proteins, yeast

Gene SYT1, Length 3,681 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SYT1	YPR095C	SPT21	P35209	758 aa		4.17	□□□□□ -1.74
SYT1	YPR095C	HXT5	P38695	592 aa		4.17	□□□□□ -1.74
SYT1	YPR095C	DOT6	P40059	670 aa	Known RBP	4.17	□□□□□ -1.74
SYT1	YPR095C	VPS4	P52917	437 aa		4.17	□□□□□ -1.74
SYT1	YPR095C	YNL058C	P53947	316 aa		4.17	□□□□□ -1.74
SYT1	YPR095C	RAD27	P26793	382 aa		4.17	□□□□□ -1.74
SYT1	YPR095C	YNL011C	P53980	444 aa		4.17	□□□□□ -1.74
SYT1	YPR095C	VTC3	Q02725	835 aa		4.17	□□□□□ -1.74
SYT1	YPR095C	YLR257W	Q06146	321 aa	Known RBP	4.17	□□□□□ -1.74
SYT1	YPR095C	ATG16	Q03818	150 aa		4.16	□□□□□ -1.74
SYT1	YPR095C	ISA1	Q07821	250 aa	Predicted RBP	4.16	□□□□□ -1.74
SYT1	YPR095C	PUP1	P25043	261 aa		4.16	□□□□□ -1.74
SYT1	YPR095C	RSC2	Q06488	889 aa		4.16	□□□□□ -1.74
SYT1	YPR095C	RNA1	P11745	407 aa	Known RBP	4.16	□□□□□ -1.74
SYT1	YPR095C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
SYT1	YPR095C	NPR3	P38742	1146 aa		4.16	□□□□□ -1.74
SYT1	YPR095C	ERP5	P38819	212 aa		4.16	□□□□□ -1.74
SYT1	YPR095C	UBP12	P39538	1254 aa		4.16	□□□□□ -1.74
SYT1	YPR095C	ITC1	P53125	1264 aa		4.16	□□□□□ -1.74
SYT1	YPR095C	BNI5	P53890	448 aa	Known RBP	4.16	□□□□□ -1.74
SYT1	YPR095C	PSR1	Q07800	427 aa		4.16	□□□□□ -1.74
SYT1	YPR095C	RIX7	Q07844	837 aa	Known RBP	4.16	□□□□□ -1.74
SYT1	YPR095C	MET6	P05694	767 aa	Known RBP	4.15	□□□□□ -1.74
SYT1	YPR095C	MPH2	P0CD99	609 aa		4.15	□□□□□ -1.74
SYT1	YPR095C	RXT2	P38255	430 aa		4.15	□□□□□ -1.74
SYT1	YPR095C	PRP3	Q03338	469 aa	Predicted RBP	4.15	□□□□□ -1.74
SYT1	YPR095C	VMS1	Q04311	632 aa	Known RBP	4.15	□□□□□ -1.74
SYT1	YPR095C	EDE1	P34216	1381 aa		4.15	□□□□□ -1.75
SYT1	YPR095C	MXR1	P40029	184 aa		4.15	□□□□□ -1.75
SYT1	YPR095C	DAS1	P47005	663 aa		4.15	□□□□□ -1.75
SYT1	YPR095C	KEL2	P50090	882 aa		4.15	□□□□□ -1.75
SYT1	YPR095C	ATG1	P53104	897 aa		4.15	□□□□□ -1.75
SYT1	YPR095C	YRF1-3	P0CX14	1859 aa		4.15	□□□□□ -1.75
SYT1	YPR095C	YRF1-7	P0CX15	1859 aa		4.15	□□□□□ -1.75
SYT1	YPR095C	YRF1-6	P53819	1859 aa		4.15	□□□□□ -1.75
SYT1	YPR095C	RIM15	P43565	1770 aa		4.15	□□□□□ -1.75
SYT1	YPR095C	IKI3	Q06706	1349 aa	Known RBP	4.14	□□□□□ -1.75
SYT1	YPR095C	UGA3	P26370	528 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	RPG1	P38249	964 aa	Known RBP	4.14	□□□□□ -1.75
SYT1	YPR095C	LEM3	P42838	414 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	RSM7	P47150	247 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	SXM1	Q04175	944 aa	Known RBP	4.14	□□□□□ -1.75
SYT1	YPR095C	MSC6	Q08818	692 aa	Known RBP	4.14	□□□□□ -1.75
SYT1	YPR095C	URB1	P34241	1764 aa	Known RBP	4.14	□□□□□ -1.75
SYT1	YPR095C	PET111	P08468	800 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	YHL050C	P38721	697 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	YHR219W	P38900	624 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	RSC1	P53236	928 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	NYV1	Q12255	253 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	YEL077C	Q3E7X8	1277 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	CMP2	P14747	604 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	DPB3	P27344	201 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	SAS3	P34218	831 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	PIM1	P36775	1133 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	CSN12	P47130	423 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	ERO1	Q03103	563 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	YOR131C	Q12486	218 aa		4.14	□□□□□ -1.75
SYT1	YPR095C	PEX5	P35056	612 aa		4.13	□□□□□ -1.75
SYT1	YPR095C	SPO20	Q04359	397 aa		4.13	□□□□□ -1.75
SYT1	YPR095C	APC5	Q08683	685 aa		4.13	□□□□□ -1.75
SYT1	YPR095C	JNM1	P36224	373 aa		4.13	□□□□□ -1.75
SYT1	YPR095C	ELA1	P53861	379 aa	Predicted RBP	4.13	□□□□□ -1.75
SYT1	YPR095C	YNL108C	P53929	270 aa		4.13	□□□□□ -1.75
SYT1	YPR095C	YOR378W	Q08902	515 aa		4.13	□□□□□ -1.75
SYT1	YPR095C	PCL8	Q08966	492 aa		4.13	□□□□□ -1.75
SYT1	YPR095C	YEF3	P16521	1044 aa	Known RBP	4.13	□□□□□ -1.75
SYT1	YPR095C	YBL036C	P38197	257 aa		4.13	□□□□□ -1.75
SYT1	YPR095C	CRP1	P38845	465 aa	Known RBP	4.13	□□□□□ -1.75
SYT1	YPR095C	YHR218W	P38899	603 aa		4.12	□□□□□ -1.75
SYT1	YPR095C	WHI5	Q12416	295 aa		4.12	□□□□□ -1.75
SYT1	YPR095C	GRS1	P38088	690 aa	Known RBP	4.12	□□□□□ -1.75
SYT1	YPR095C	UBP14	P38237	781 aa	Known RBP	4.12	□□□□□ -1.75
SYT1	YPR095C	TPS3	P38426	1054 aa	Known RBP	4.12	□□□□□ -1.75
SYT1	YPR095C	YGR021W	P53212	290 aa		4.12	□□□□□ -1.75
SYT1	YPR095C	STB3	Q12427	513 aa		4.12	□□□□□ -1.75
SYT1	YPR095C	SRM1	P21827	482 aa		4.11	□□□□□ -1.75
SYT1	YPR095C	VPH1	P32563	840 aa	Known RBP	4.11	□□□□□ -1.75
SYT1	YPR095C	MTC2	P34246	357 aa		4.11	□□□□□ -1.75
SYT1	YPR095C	YKL222C	P35995	705 aa		4.11	□□□□□ -1.75
SYT1	YPR095C	ESL2	P36168	1195 aa		4.11	□□□□□ -1.75
SYT1	YPR095C	MAD1	P40957	749 aa		4.11	□□□□□ -1.75
SYT1	YPR095C	PEX8	P53248	589 aa		4.11	□□□□□ -1.75
SYT1	YPR095C	SPO71	Q03868	1245 aa		4.11	□□□□□ -1.75
SYT1	YPR095C	WRS1	Q12109	432 aa	Known RBP	4.11	□□□□□ -1.75
SYT1	YPR095C	RAD4	P14736	754 aa		4.11	□□□□□ -1.75
SYT1	YPR095C	FOX2	Q02207	900 aa	Known RBP	4.11	□□□□□ -1.75
SYT1	YPR095C	CLP1	Q08685	445 aa	Predicted RBP	4.11	□□□□□ -1.75
SYT1	YPR095C	SPS1	P08458	490 aa		4.11	□□□□□ -1.75
SYT1	YPR095C	ANP1	P32629	500 aa		4.11	□□□□□ -1.75
SYT1	YPR095C	NDE1	P40215	560 aa		4.11	□□□□□ -1.75
SYT1	YPR095C	RPN4	Q03465	531 aa		4.11	□□□□□ -1.75
SYT1	YPR095C	SLX4	Q12098	748 aa		4.11	□□□□□ -1.75
SYT1	YPR095C	ECM32	P32644	1121 aa	Known RBP	4.1	□□□□□ -1.75
SYT1	YPR095C	CCT3	P39077	534 aa	Known RBP	4.1	□□□□□ -1.75
SYT1	YPR095C	GTT3	P39996	337 aa		4.1	□□□□□ -1.75
SYT1	YPR095C	MAM1	P40065	302 aa		4.1	□□□□□ -1.75
SYT1	YPR095C	ATP22	P50273	684 aa	Predicted RBP	4.1	□□□□□ -1.75
SYT1	YPR095C	RIA1	P53893	1110 aa		4.1	□□□□□ -1.75
SYT1	YPR095C	YLR352W	Q06479	807 aa		4.1	□□□□□ -1.75
SYT1	YPR095C	MSB4	Q12317	492 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms