RNA–Protein interactions for RNA: YMR235C

RNA1, Transcript of GTPase activating protein (GAP) for Gsp1p, yeastyeast

Gene RNA1, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RNA1YMR235C MSC7P38694 644 aa6.08□□□□□ -1.44
RNA1YMR235C SSF1P38789 453 aaPredicted RBP6.08□□□□□ -1.44
RNA1YMR235C MTO1P53070 669 aa6.08□□□□□ -1.44
RNA1YMR235C YMR187CQ03236 431 aa6.08□□□□□ -1.44
RNA1YMR235C CDC3P32457 520 aaKnown RBP6.07□□□□□ -1.44
RNA1YMR235C HXT5P38695 592 aa6.07□□□□□ -1.44
RNA1YMR235C SKN7P38889 622 aa6.07□□□□□ -1.44
RNA1YMR235C BOI2P39969 1040 aa6.07□□□□□ -1.44
RNA1YMR235C CCT8P47079 568 aaKnown RBP6.07□□□□□ -1.44
RNA1YMR235C HEH2Q03281 663 aa6.07□□□□□ -1.44
RNA1YMR235C CPS1P27614 576 aa6.06□□□□□ -1.44
RNA1YMR235C PAM1P37304 830 aaKnown RBP6.06□□□□□ -1.44
RNA1YMR235C SKP1P52286 194 aa6.06□□□□□ -1.44
RNA1YMR235C CWH41P53008 833 aa6.06□□□□□ -1.44
RNA1YMR235C ECM23Q02710 187 aa6.06□□□□□ -1.44
RNA1YMR235C KAP122P32767 1081 aa6.05□□□□□ -1.44
RNA1YMR235C RPL34AP87262 121 aaPredicted RBP6.05□□□□□ -1.44
RNA1YMR235C SEN54Q02825 467 aaPredicted RBP6.05□□□□□ -1.44
RNA1YMR235C TRS33Q99394 268 aa6.05□□□□□ -1.44
RNA1YMR235C NCL1P38205 684 aaKnown RBP6.04□□□□□ -1.44
RNA1YMR235C NOB1Q08444 459 aaKnown RBP6.03□□□□□ -1.44
RNA1YMR235C CUS1Q02554 436 aaPredicted RBP6.02□□□□□ -1.45
RNA1YMR235C HEM3P28789 327 aa6.01□□□□□ -1.45
RNA1YMR235C RRN6P32786 894 aa6.01□□□□□ -1.45
RNA1YMR235C UBX7P38349 436 aa6.01□□□□□ -1.45
RNA1YMR235C PRK1P40494 810 aa6.01□□□□□ -1.45
RNA1YMR235C RPC31P17890 251 aa6□□□□□ -1.45
RNA1YMR235C YCK2P23292 546 aaKnown RBP6□□□□□ -1.45
RNA1YMR235C APM2P38700 605 aa6□□□□□ -1.45
RNA1YMR235C MET10P39692 1035 aa6□□□□□ -1.45
RNA1YMR235C QDR2P40474 542 aa6□□□□□ -1.45
RNA1YMR235C YDR215CQ12240 137 aa6□□□□□ -1.45
RNA1YMR235C SUV3P32580 737 aa5.99□□□□□ -1.45
RNA1YMR235C CAB1Q04430 367 aa5.99□□□□□ -1.45
RNA1YMR235C PUP1P25043 261 aa5.98□□□□□ -1.45
RNA1YMR235C NHA1Q99271 985 aa5.98□□□□□ -1.45
RNA1YMR235C YTA7P40340 1379 aa5.97□□□□□ -1.45
RNA1YMR235C MRPL33P20084 86 aa5.97□□□□□ -1.45
RNA1YMR235C ALG14P38242 237 aa5.97□□□□□ -1.45
RNA1YMR235C SLN1P39928 1220 aaPredicted RBP5.97□□□□□ -1.45
RNA1YMR235C YNR040WP53736 256 aa5.97□□□□□ -1.45
RNA1YMR235C PGM2P37012 569 aaKnown RBP5.96□□□□□ -1.46
RNA1YMR235C FOX2Q02207 900 aaKnown RBP5.96□□□□□ -1.46
RNA1YMR235C PUF6Q04373 656 aaKnown RBP5.96□□□□□ -1.46
RNA1YMR235C SBP1P10080 294 aaKnown RBP5.95□□□□□ -1.46
RNA1YMR235C VMA3P25515 160 aa5.95□□□□□ -1.46
RNA1YMR235C ASF1P32447 279 aa5.95□□□□□ -1.46
RNA1YMR235C TAT1P38085 619 aa5.95□□□□□ -1.46
RNA1YMR235C YBR197CP38306 217 aa5.95□□□□□ -1.46
RNA1YMR235C TPS3P38426 1054 aaKnown RBP5.95□□□□□ -1.46
RNA1YMR235C DYS1P38791 387 aa5.95□□□□□ -1.46
RNA1YMR235C YML083CQ04526 418 aa5.95□□□□□ -1.46
RNA1YMR235C HAT1Q12341 374 aa5.95□□□□□ -1.46
RNA1YMR235C ALD4P46367 519 aaKnown RBP5.94□□□□□ -1.46
RNA1YMR235C NAR1P23503 491 aaKnown RBP5.93□□□□□ -1.46
RNA1YMR235C GIS4Q04233 774 aa5.93□□□□□ -1.46
RNA1YMR235C YOR296WQ08748 1289 aa5.93□□□□□ -1.46
RNA1YMR235C IDI1P15496 288 aa5.92□□□□□ -1.46
RNA1YMR235C LDH1P38139 375 aa5.92□□□□□ -1.46
RNA1YMR235C AMN1P38285 549 aaPredicted RBP5.92□□□□□ -1.46
RNA1YMR235C STM1P39015 273 aaKnown RBP5.92□□□□□ -1.46
RNA1YMR235C YER156CP40093 338 aaKnown RBP5.92□□□□□ -1.46
RNA1YMR235C ITC1P53125 1264 aa5.92□□□□□ -1.46
RNA1YMR235C PUN1Q06991 263 aa5.92□□□□□ -1.46
RNA1YMR235C MCA1Q08601 432 aa5.92□□□□□ -1.46
RNA1YMR235C SRS2P12954 1174 aa5.91□□□□□ -1.46
RNA1YMR235C ISC10P32645 267 aa5.91□□□□□ -1.46
RNA1YMR235C GIP1P38229 639 aa5.91□□□□□ -1.46
RNA1YMR235C LSB6P42951 607 aa5.91□□□□□ -1.46
RNA1YMR235C PRY1P47032 299 aa5.91□□□□□ -1.46
RNA1YMR235C OCA5P38738 679 aa5.9□□□□□ -1.46
RNA1YMR235C SEC20P28791 383 aa5.89□□□□□ -1.47
RNA1YMR235C NAB2P32505 525 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
RNA1YMR235C BUD9P53226 547 aa5.89□□□□□ -1.47
RNA1YMR235C DOS2P54858 310 aa5.89□□□□□ -1.47
RNA1YMR235C ISW1P38144 1129 aa5.88□□□□□ -1.47
RNA1YMR235C BSD2P38356 321 aa5.88□□□□□ -1.47
RNA1YMR235C NRD1P53617 575 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
RNA1YMR235C CWC15Q03772 175 aaKnown RBP5.88□□□□□ -1.47
RNA1YMR235C SLP1Q12232 587 aa5.88□□□□□ -1.47
RNA1YMR235C MRP10O75012 95 aa5.87□□□□□ -1.47
RNA1YMR235C YPL034WQ03083 165 aa5.87□□□□□ -1.47
RNA1YMR235C RSC2Q06488 889 aa5.87□□□□□ -1.47
RNA1YMR235C RRP15Q06511 250 aaPredicted RBP5.87□□□□□ -1.47
RNA1YMR235C BRN1P38170 754 aa5.86□□□□□ -1.47
RNA1YMR235C YBR287WP38355 427 aa5.86□□□□□ -1.47
RNA1YMR235C IPL1P38991 367 aa5.86□□□□□ -1.47
RNA1YMR235C AI3P03877 415 aa5.85□□□□□ -1.47
RNA1YMR235C MSN1P22148 382 aa5.85□□□□□ -1.47
RNA1YMR235C RRM3P38766 723 aa5.85□□□□□ -1.47
RNA1YMR235C YBL113CQ7M4S9 792 aa5.85□□□□□ -1.47
RNA1YMR235C YIL165CP40446 119 aa5.84□□□□□ -1.47
RNA1YMR235C PNP1Q05788 311 aa5.84□□□□□ -1.47
RNA1YMR235C FPR4Q06205 392 aaPredicted RBP5.84□□□□□ -1.47
RNA1YMR235C TOP1P04786 769 aa5.83□□□□□ -1.48
RNA1YMR235C SAC7P17121 654 aa5.83□□□□□ -1.48
RNA1YMR235C SFA1P32771 386 aa5.83□□□□□ -1.48
RNA1YMR235C FIR1P40020 876 aa5.83□□□□□ -1.48
RNA1YMR235C PPT1P53043 513 aa5.83□□□□□ -1.48
RNA1YMR235C SVF1Q05515 481 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms