RNA–Protein interactions for RNA: YMR214W

SCJ1, Transcript of One of several homologs of bacterial chaperone DnaJ, yeast

Gene SCJ1, Length 1,134 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCJ1	YMR214W	ASH1	P34233	588 aa		18.79	■□□□□ 0.6
SCJ1	YMR214W	TOS4	Q06266	489 aa		18.79	■□□□□ 0.6
SCJ1	YMR214W	PSH1	Q12161	406 aa		18.79	■□□□□ 0.6
SCJ1	YMR214W	ARG82	P07250	355 aa		18.78	■□□□□ 0.6
SCJ1	YMR214W	JJJ2	P46997	583 aa		18.78	■□□□□ 0.6
SCJ1	YMR214W	MTC3	P53077	123 aa		18.78	■□□□□ 0.6
SCJ1	YMR214W	IRC4	Q03036	179 aa		18.78	■□□□□ 0.6
SCJ1	YMR214W	UTP7	P40055	554 aa	Known RBP	18.77	■□□□□ 0.6
SCJ1	YMR214W	YRB30	P53107	440 aa	Predicted RBP	18.76	■□□□□ 0.59
SCJ1	YMR214W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	18.76	■□□□□ 0.59	not detected
SCJ1	YMR214W	SAC3	P46674	1301 aa		18.75	■□□□□ 0.59
SCJ1	YMR214W	SPR3	P41901	512 aa		18.75	■□□□□ 0.59
SCJ1	YMR214W	YLR225C	Q05948	407 aa	Known RBP	18.75	■□□□□ 0.59
SCJ1	YMR214W	SRT1	Q03175	343 aa		18.74	■□□□□ 0.59
SCJ1	YMR214W	LCB1	P25045	558 aa	Known RBP	18.73	■□□□□ 0.59
SCJ1	YMR214W	YJR008W	P47085	338 aa		18.73	■□□□□ 0.59
SCJ1	YMR214W	GIN4	Q12263	1142 aa		18.73	■□□□□ 0.59
SCJ1	YMR214W	SUP35	P05453	685 aa	Known RBP	18.72	■□□□□ 0.59
SCJ1	YMR214W	MRP7	P12687	371 aa		18.72	■□□□□ 0.59
SCJ1	YMR214W	YDR306C	Q06640	478 aa		18.72	■□□□□ 0.59
SCJ1	YMR214W	PSF3	Q12146	194 aa		18.72	■□□□□ 0.59
SCJ1	YMR214W	PAH1	P32567	862 aa		18.71	■□□□□ 0.59
SCJ1	YMR214W	PEX29	Q03370	554 aa		18.7	■□□□□ 0.58
SCJ1	YMR214W	FBP1	P09201	348 aa		18.69	■□□□□ 0.58
SCJ1	YMR214W	WRS1	Q12109	432 aa	Known RBP	18.69	■□□□□ 0.58
SCJ1	YMR214W	YIL092W	P40497	633 aa		18.68	■□□□□ 0.58
SCJ1	YMR214W	SET1	P38827	1080 aa	Known RBP	18.67	■□□□□ 0.58
SCJ1	YMR214W	DAL5	P15365	543 aa		18.66	■□□□□ 0.58
SCJ1	YMR214W	SNU66	Q12420	587 aa	Predicted RBP	18.66	■□□□□ 0.58
SCJ1	YMR214W	TPS3	P38426	1054 aa	Known RBP	18.65	■□□□□ 0.58
SCJ1	YMR214W	NUG1	P40010	520 aa	Known RBP	18.65	■□□□□ 0.58
SCJ1	YMR214W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	18.64	■□□□□ 0.57	not detected
SCJ1	YMR214W	YJL171C	P46992	396 aa		18.64	■□□□□ 0.57
SCJ1	YMR214W	AAD16	Q02895	342 aa		18.64	■□□□□ 0.57
SCJ1	YMR214W	MAK21	Q12176	1025 aa	Known RBP	18.64	■□□□□ 0.57
SCJ1	YMR214W	PSF2	P40359	213 aa		18.63	■□□□□ 0.57
SCJ1	YMR214W	MTC5	Q03897	1148 aa		18.63	■□□□□ 0.57
SCJ1	YMR214W	PUS6	P53294	404 aa		18.62	■□□□□ 0.57
SCJ1	YMR214W	ULP1	Q02724	621 aa		18.6	■□□□□ 0.57
SCJ1	YMR214W	NOP8	Q08287	484 aa	Predicted RBP	18.6	■□□□□ 0.57
SCJ1	YMR214W	RAD2	P07276	1031 aa		18.57	■□□□□ 0.56
SCJ1	YMR214W	YFH7	P43591	353 aa		18.56	■□□□□ 0.56
SCJ1	YMR214W	ATG1	P53104	897 aa		18.56	■□□□□ 0.56
SCJ1	YMR214W	YGR122W	P53272	402 aa		18.56	■□□□□ 0.56
SCJ1	YMR214W	YVH1	Q02256	364 aa	Known RBP	18.56	■□□□□ 0.56
SCJ1	YMR214W	RPT3	P33298	428 aa	Known RBP	18.55	■□□□□ 0.56
SCJ1	YMR214W	PPM2	Q08282	695 aa		18.55	■□□□□ 0.56
SCJ1	YMR214W	ADR1	P07248	1323 aa		18.54	■□□□□ 0.56
SCJ1	YMR214W	ERG7	P38604	731 aa		18.54	■□□□□ 0.56
SCJ1	YMR214W	KEL1	P38853	1164 aa	Known RBP	18.54	■□□□□ 0.56
SCJ1	YMR214W	RAD53	P22216	821 aa		18.53	■□□□□ 0.56
SCJ1	YMR214W	YPP1	P46951	817 aa		18.53	■□□□□ 0.56
SCJ1	YMR214W	RAD24	P32641	659 aa		18.52	■□□□□ 0.56
SCJ1	YMR214W	UBP12	P39538	1254 aa		18.52	■□□□□ 0.56
SCJ1	YMR214W	CSI1	Q04368	295 aa		18.52	■□□□□ 0.56
SCJ1	YMR214W	PMA1	P05030	918 aa	Known RBP	18.5	■□□□□ 0.55
SCJ1	YMR214W	SWC3	P31376	625 aa		18.5	■□□□□ 0.55
SCJ1	YMR214W	NET1	P47035	1189 aa		18.5	■□□□□ 0.55
SCJ1	YMR214W	IXR1	P33417	597 aa		18.49	■□□□□ 0.55
SCJ1	YMR214W	CLA4	P48562	842 aa		18.49	■□□□□ 0.55
SCJ1	YMR214W	LDH1	P38139	375 aa		18.48	■□□□□ 0.55
SCJ1	YMR214W	APL6	P46682	809 aa		18.48	■□□□□ 0.55
SCJ1	YMR214W	VPS62	P53285	467 aa		18.48	■□□□□ 0.55
SCJ1	YMR214W	ADP1	P25371	1049 aa		18.47	■□□□□ 0.55
SCJ1	YMR214W	OCT1	P35999	772 aa		18.47	■□□□□ 0.55
SCJ1	YMR214W	HXT10	P43581	546 aa		18.47	■□□□□ 0.55
SCJ1	YMR214W	POL32	P47110	350 aa		18.47	■□□□□ 0.55
SCJ1	YMR214W	MCD4	P36051	919 aa		18.46	■□□□□ 0.55
SCJ1	YMR214W	ILV3	P39522	585 aa	Known RBP	18.46	■□□□□ 0.55
SCJ1	YMR214W	VPS13	Q07878	3144 aa		18.46	■□□□□ 0.55
SCJ1	YMR214W	FAP1	P53971	965 aa		18.43	■□□□□ 0.54
SCJ1	YMR214W	TY3A-G	Q12173	290 aa		18.43	■□□□□ 0.54
SCJ1	YMR214W	TY3A-I	Q99219	290 aa		18.43	■□□□□ 0.54
SCJ1	YMR214W	DUR1,2	P32528	1835 aa	Known RBP	18.42	■□□□□ 0.54
SCJ1	YMR214W	RPS19A	P07280	144 aa	Known RBP	18.42	■□□□□ 0.54
SCJ1	YMR214W	RPS19B	P07281	144 aa	Predicted RBP	18.42	■□□□□ 0.54
SCJ1	YMR214W	MDL2	P33311	773 aa		18.41	■□□□□ 0.54
SCJ1	YMR214W	ACA1	P39970	489 aa		18.41	■□□□□ 0.54
SCJ1	YMR214W	PUF6	Q04373	656 aa	Known RBP	18.41	■□□□□ 0.54
SCJ1	YMR214W	CFT2	Q12102	859 aa	Predicted RBP	18.41	■□□□□ 0.54
SCJ1	YMR214W	CDC60	P26637	1090 aa	Known RBP	18.4	■□□□□ 0.54
SCJ1	YMR214W	SPT21	P35209	758 aa		18.4	■□□□□ 0.54
SCJ1	YMR214W	BOI2	P39969	1040 aa		18.39	■□□□□ 0.53
SCJ1	YMR214W	LYS14	P40971	790 aa		18.39	■□□□□ 0.53
SCJ1	YMR214W	EAR1	Q03212	550 aa		18.39	■□□□□ 0.53
SCJ1	YMR214W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	18.39	■□□□□ 0.53	not detected
SCJ1	YMR214W	FLO1	P32768	1537 aa		18.39	■□□□□ 0.53
SCJ1	YMR214W	PTK1	P36002	662 aa	Predicted RBP	18.38	■□□□□ 0.53
SCJ1	YMR214W	TFA1	P36100	482 aa		18.38	■□□□□ 0.53
SCJ1	YMR214W	YBL028C	P38202	106 aa		18.38	■□□□□ 0.53
SCJ1	YMR214W	VAB2	P40003	282 aa		18.38	■□□□□ 0.53
SCJ1	YMR214W	YIR042C	P40586	236 aa		18.38	■□□□□ 0.53
SCJ1	YMR214W	RRI2	Q12348	645 aa		18.38	■□□□□ 0.53
SCJ1	YMR214W	TAO3	P40468	2376 aa		18.37	■□□□□ 0.53
SCJ1	YMR214W	SPO1	P53541	631 aa		18.37	■□□□□ 0.53
SCJ1	YMR214W	YNG2	P38806	282 aa	Known RBP	18.35	■□□□□ 0.53
SCJ1	YMR214W	INM2	Q05533	292 aa		18.35	■□□□□ 0.53
SCJ1	YMR214W	SRS2	P12954	1174 aa		18.34	■□□□□ 0.53
SCJ1	YMR214W	YPR117W	Q06116	2489 aa		18.34	■□□□□ 0.53
SCJ1	YMR214W	YDJ1	P25491	409 aa	Known RBP	18.33	■□□□□ 0.52

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms