RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W GEF1P37020 779 aa2.33□□□□□ -2.04
SLX4YLR135W RTG2P32608 588 aaKnown RBP2.32□□□□□ -2.04
SLX4YLR135W TTI1P36097 1038 aa2.32□□□□□ -2.04
SLX4YLR135W YPP1P46951 817 aa2.32□□□□□ -2.04
SLX4YLR135W RIM21P48565 533 aa2.32□□□□□ -2.04
SLX4YLR135W HEH2Q03281 663 aa2.32□□□□□ -2.04
SLX4YLR135W YNL108CP53929 270 aa2.31□□□□□ -2.04
SLX4YLR135W MRX10Q05648 414 aa2.31□□□□□ -2.04
SLX4YLR135W ENO2P00925 437 aaKnown RBP2.3□□□□□ -2.04
SLX4YLR135W PDC6P26263 563 aaKnown RBP2.3□□□□□ -2.04
SLX4YLR135W UTR2P32623 467 aa2.3□□□□□ -2.04
SLX4YLR135W GIS4Q04233 774 aa2.3□□□□□ -2.04
SLX4YLR135W NOP8Q08287 484 aaPredicted RBP2.3□□□□□ -2.04
SLX4YLR135W YDJ1P25491 409 aaKnown RBP2.3□□□□□ -2.04
SLX4YLR135W AKR1P39010 764 aa2.3□□□□□ -2.04
SLX4YLR135W SNM1P40993 198 aa2.3□□□□□ -2.04
SLX4YLR135W DFG16Q99234 619 aa2.3□□□□□ -2.04
SLX4YLR135W ENO1P00924 437 aaKnown RBP2.29□□□□□ -2.04
SLX4YLR135W MSB1P21339 1137 aaKnown RBP2.29□□□□□ -2.04
SLX4YLR135W NAR1P23503 491 aaKnown RBP2.29□□□□□ -2.04
SLX4YLR135W CPS1P27614 576 aa2.29□□□□□ -2.04
SLX4YLR135W GUT2P32191 649 aa2.29□□□□□ -2.04
SLX4YLR135W LRG1P35688 1017 aa2.29□□□□□ -2.04
SLX4YLR135W PSH1Q12161 406 aa2.29□□□□□ -2.04
SLX4YLR135W NGR1P32831 672 aaKnown RBP2.29□□□□□ -2.04
SLX4YLR135W PEP12P32854 288 aa2.29□□□□□ -2.04
SLX4YLR135W UTP7P40055 554 aaKnown RBP2.29□□□□□ -2.04
SLX4YLR135W MRX12P47084 519 aa2.29□□□□□ -2.04
SLX4YLR135W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
SLX4YLR135W NOB1Q08444 459 aaKnown RBP2.29□□□□□ -2.04
SLX4YLR135W PUP1P25043 261 aa2.28□□□□□ -2.04
SLX4YLR135W SLX8P40072 274 aa2.28□□□□□ -2.04
SLX4YLR135W SUM1P46676 1062 aa2.28□□□□□ -2.04
SLX4YLR135W YML020WQ03722 664 aa2.28□□□□□ -2.04
SLX4YLR135W RDS2P19541 446 aaKnown RBP2.27□□□□□ -2.05
SLX4YLR135W APL6P46682 809 aa2.27□□□□□ -2.05
SLX4YLR135W PNS1Q12412 539 aa2.27□□□□□ -2.05
SLX4YLR135W TGL4P36165 910 aa2.27□□□□□ -2.05
SLX4YLR135W MSC7P38694 644 aa2.27□□□□□ -2.05
SLX4YLR135W RPL34AP87262 121 aaPredicted RBP2.27□□□□□ -2.05
SLX4YLR135W YPR084WQ06821 456 aa2.27□□□□□ -2.05
SLX4YLR135W SPT2P06843 333 aaPredicted RBP2.26□□□□□ -2.05
SLX4YLR135W CDC3P32457 520 aaKnown RBP2.26□□□□□ -2.05
SLX4YLR135W ATG3P40344 310 aa2.26□□□□□ -2.05
SLX4YLR135W UTP13Q05946 817 aaKnown RBP2.26□□□□□ -2.05
SLX4YLR135W YTA6P40328 754 aa2.26□□□□□ -2.05
SLX4YLR135W MSH6Q03834 1242 aa2.26□□□□□ -2.05
SLX4YLR135W EMP47P43555 445 aa2.25□□□□□ -2.05
SLX4YLR135W STE20Q03497 939 aaKnown RBP2.25□□□□□ -2.05
SLX4YLR135W YML083CQ04526 418 aa2.25□□□□□ -2.05
SLX4YLR135W NSI1Q12457 570 aa2.25□□□□□ -2.05
SLX4YLR135W SSF1P38789 453 aaPredicted RBP2.25□□□□□ -2.05
SLX4YLR135W GAL2P13181 574 aa2.24□□□□□ -2.05
SLX4YLR135W ISF1P32488 338 aa2.24□□□□□ -2.05
SLX4YLR135W SLP1Q12232 587 aa2.24□□□□□ -2.05
SLX4YLR135W PHO87P25360 923 aa2.23□□□□□ -2.05
SLX4YLR135W FLR1P38124 548 aa2.23□□□□□ -2.05
SLX4YLR135W HAP4P14064 554 aa2.23□□□□□ -2.05
SLX4YLR135W SLD2P34252 453 aa2.23□□□□□ -2.05
SLX4YLR135W SEN54Q02825 467 aaPredicted RBP2.23□□□□□ -2.05
SLX4YLR135W PUF6Q04373 656 aaKnown RBP2.23□□□□□ -2.05
SLX4YLR135W LEU1P07264 779 aaKnown RBP2.22□□□□□ -2.05
SLX4YLR135W RGP1P16664 663 aa2.22□□□□□ -2.05
SLX4YLR135W NAM7P30771 971 aaKnown RBP2.22□□□□□ -2.05
SLX4YLR135W SHM1P37292 490 aaPredicted RBP2.22□□□□□ -2.05
SLX4YLR135W PRK1P40494 810 aa2.22□□□□□ -2.05
SLX4YLR135W SDH1Q00711 640 aa2.22□□□□□ -2.05
SLX4YLR135W ECM23Q02710 187 aa2.22□□□□□ -2.05
SLX4YLR135W CWC15Q03772 175 aaKnown RBP2.22□□□□□ -2.05
SLX4YLR135W GAS4Q08271 471 aa2.22□□□□□ -2.05
SLX4YLR135W SOH1P38633 127 aa2.22□□□□□ -2.05
SLX4YLR135W TSC13Q99190 310 aa2.22□□□□□ -2.05
SLX4YLR135W UBP1P25037 809 aa2.21□□□□□ -2.06
SLX4YLR135W UBX7P38349 436 aa2.21□□□□□ -2.06
SLX4YLR135W KTR7P40504 517 aa2.21□□□□□ -2.06
SLX4YLR135W YFL034WP43564 1073 aa2.21□□□□□ -2.06
SLX4YLR135W ACS2P52910 683 aaKnown RBP2.21□□□□□ -2.06
SLX4YLR135W ROM1P53046 1155 aa2.21□□□□□ -2.06
SLX4YLR135W ABZ1P37254 787 aaPredicted RBP2.21□□□□□ -2.06
SLX4YLR135W HAL5P38970 855 aaKnown RBP2.21□□□□□ -2.06
SLX4YLR135W STM1P39015 273 aaKnown RBP2.21□□□□□ -2.06
SLX4YLR135W HAT1Q12341 374 aa2.21□□□□□ -2.06
SLX4YLR135W TUB2P02557 457 aaKnown RBP2.2□□□□□ -2.06
SLX4YLR135W YHL008CP38750 627 aa2.2□□□□□ -2.06
SLX4YLR135W AIM9P40053 627 aaKnown RBP2.2□□□□□ -2.06
SLX4YLR135W SRS2P12954 1174 aa2.19□□□□□ -2.06
SLX4YLR135W HEM3P28789 327 aa2.19□□□□□ -2.06
SLX4YLR135W SEC20P28791 383 aa2.19□□□□□ -2.06
SLX4YLR135W NCL1P38205 684 aaKnown RBP2.19□□□□□ -2.06
SLX4YLR135W ATG1P53104 897 aa2.19□□□□□ -2.06
SLX4YLR135W DSE4P53753 1117 aa2.19□□□□□ -2.06
SLX4YLR135W ISR1Q06098 443 aaKnown RBP2.19□□□□□ -2.06
SLX4YLR135W CDA2Q06703 312 aa2.19□□□□□ -2.06
SLX4YLR135W CBC2Q08920 208 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
SLX4YLR135W TRS33Q99394 268 aa2.19□□□□□ -2.06
SLX4YLR135W TRL1P09880 827 aaKnown RBP2.19□□□□□ -2.06
SLX4YLR135W ASF1P32447 279 aa2.19□□□□□ -2.06
SLX4YLR135W YNR065CP53751 1116 aa2.19□□□□□ -2.06
SLX4YLR135W KAR5Q04746 504 aa2.19□□□□□ -2.06
SLX4YLR135W HDA3Q06623 655 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms