RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C GIS4Q04233 774 aa5.51□□□□□ -1.53
RPL40BYKR094C UTP4Q06679 776 aaKnown RBP5.51□□□□□ -1.53
RPL40BYKR094C PHO87P25360 923 aa5.5□□□□□ -1.53
RPL40BYKR094C GAS5Q08193 484 aa5.5□□□□□ -1.53
RPL40BYKR094C UBP1P25037 809 aa5.49□□□□□ -1.53
RPL40BYKR094C SCD5P34758 872 aa5.49□□□□□ -1.53
RPL40BYKR094C HXT5P38695 592 aa5.49□□□□□ -1.53
RPL40BYKR094C YNR040WP53736 256 aa5.49□□□□□ -1.53
RPL40BYKR094C KAP122P32767 1081 aa5.48□□□□□ -1.53
RPL40BYKR094C GAS4Q08271 471 aa5.47□□□□□ -1.53
RPL40BYKR094C AI3P03877 415 aa5.46□□□□□ -1.54
RPL40BYKR094C HAP4P14064 554 aa5.46□□□□□ -1.54
RPL40BYKR094C RPC31P17890 251 aa5.46□□□□□ -1.54
RPL40BYKR094C OMA1P36163 345 aa5.46□□□□□ -1.54
RPL40BYKR094C APM2P38700 605 aa5.46□□□□□ -1.54
RPL40BYKR094C MRP10O75012 95 aa5.45□□□□□ -1.54
RPL40BYKR094C NGR1P32831 672 aaKnown RBP5.45□□□□□ -1.54
RPL40BYKR094C RRM3P38766 723 aa5.45□□□□□ -1.54
RPL40BYKR094C INP52P50942 1183 aa5.45□□□□□ -1.54
RPL40BYKR094C ROM1P53046 1155 aa5.45□□□□□ -1.54
RPL40BYKR094C QDR2P40474 542 aa5.44□□□□□ -1.54
RPL40BYKR094C IDI1P15496 288 aa5.43□□□□□ -1.54
RPL40BYKR094C SAC7P17121 654 aa5.43□□□□□ -1.54
RPL40BYKR094C PGM1P33401 570 aaKnown RBP5.43□□□□□ -1.54
RPL40BYKR094C GAL2P13181 574 aa5.42□□□□□ -1.54
RPL40BYKR094C HGH1P48362 394 aaKnown RBP5.42□□□□□ -1.54
RPL40BYKR094C NAB2P32505 525 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
RPL40BYKR094C ARI1P53111 347 aaKnown RBP5.41□□□□□ -1.54
RPL40BYKR094C ITC1P53125 1264 aa5.4□□□□□ -1.54
RPL40BYKR094C SFA1P32771 386 aa5.39□□□□□ -1.55
RPL40BYKR094C CAB1Q04430 367 aa5.39□□□□□ -1.55
RPL40BYKR094C VAN1P23642 535 aa5.38□□□□□ -1.55
RPL40BYKR094C SUV3P32580 737 aa5.38□□□□□ -1.55
RPL40BYKR094C SIS2P36024 562 aa5.38□□□□□ -1.55
RPL40BYKR094C COQ2P32378 372 aa5.37□□□□□ -1.55
RPL40BYKR094C YKR073CP36153 106 aa5.37□□□□□ -1.55
RPL40BYKR094C YER156CP40093 338 aaKnown RBP5.37□□□□□ -1.55
RPL40BYKR094C TRP3P00937 484 aa5.36□□□□□ -1.55
RPL40BYKR094C BSD2P38356 321 aa5.36□□□□□ -1.55
RPL40BYKR094C TED1P40533 473 aa5.36□□□□□ -1.55
RPL40BYKR094C FOX2Q02207 900 aaKnown RBP5.36□□□□□ -1.55
RPL40BYKR094C YOR296WQ08748 1289 aa5.36□□□□□ -1.55
RPL40BYKR094C MRPL33P20084 86 aa5.35□□□□□ -1.55
RPL40BYKR094C VMA3P25515 160 aa5.35□□□□□ -1.55
RPL40BYKR094C TGL4P36165 910 aa5.35□□□□□ -1.55
RPL40BYKR094C IRC24P40580 263 aa5.35□□□□□ -1.55
RPL40BYKR094C CWH41P53008 833 aa5.35□□□□□ -1.55
RPL40BYKR094C ECM23Q02710 187 aa5.35□□□□□ -1.55
RPL40BYKR094C SLP1Q12232 587 aa5.35□□□□□ -1.55
RPL40BYKR094C YLR122CQ12312 125 aa5.35□□□□□ -1.55
RPL40BYKR094C TRS33Q99394 268 aa5.35□□□□□ -1.55
RPL40BYKR094C KAE1P36132 386 aa5.34□□□□□ -1.55
RPL40BYKR094C TY4B-PA0A0B7P3V8 1104 aa5.33□□□□□ -1.56
RPL40BYKR094C DYS1P38791 387 aa5.33□□□□□ -1.56
RPL40BYKR094C GIP2P40036 548 aa5.33□□□□□ -1.56
RPL40BYKR094C MED7Q08278 222 aa5.33□□□□□ -1.56
RPL40BYKR094C TY4A-HQ6Q5P6 413 aa5.33□□□□□ -1.56
RPL40BYKR094C RSC6P25632 483 aa5.32□□□□□ -1.56
RPL40BYKR094C AVT1P47082 602 aa5.32□□□□□ -1.56
RPL40BYKR094C SOK2P53438 785 aaPredicted RBP5.32□□□□□ -1.56
RPL40BYKR094C TY1A-NL1Q12391 440 aaKnown RBP5.32□□□□□ -1.56
RPL40BYKR094C GIP1P38229 639 aa5.31□□□□□ -1.56
RPL40BYKR094C YBR197CP38306 217 aa5.31□□□□□ -1.56
RPL40BYKR094C UBX7P38349 436 aa5.31□□□□□ -1.56
RPL40BYKR094C YJL181WP46987 611 aa5.31□□□□□ -1.56
RPL40BYKR094C LIP5P32875 414 aa5.3□□□□□ -1.56
RPL40BYKR094C TTI1P36097 1038 aa5.3□□□□□ -1.56
RPL40BYKR094C TOS1P38288 455 aa5.3□□□□□ -1.56
RPL40BYKR094C NAM7P30771 971 aaKnown RBP5.29□□□□□ -1.56
RPL40BYKR094C SAF1P38352 637 aa5.29□□□□□ -1.56
RPL40BYKR094C AKR1P39010 764 aa5.29□□□□□ -1.56
RPL40BYKR094C PPT1P53043 513 aa5.29□□□□□ -1.56
RPL40BYKR094C YGR130CP53278 816 aa5.29□□□□□ -1.56
RPL40BYKR094C LDH1P38139 375 aa5.28□□□□□ -1.56
RPL40BYKR094C CTH1P47976 325 aa5.28□□□□□ -1.56
RPL40BYKR094C RSC2Q06488 889 aa5.28□□□□□ -1.56
RPL40BYKR094C ISC10P32645 267 aa5.27□□□□□ -1.57
RPL40BYKR094C ISW1P38144 1129 aa5.27□□□□□ -1.57
RPL40BYKR094C CHS2P14180 963 aa5.26□□□□□ -1.57
RPL40BYKR094C PUB1P32588 453 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57 RIP-Chip
RPL40BYKR094C YIL165CP40446 119 aa5.26□□□□□ -1.57
RPL40BYKR094C ALD4P46367 519 aaKnown RBP5.26□□□□□ -1.57
RPL40BYKR094C DSE4P53753 1117 aa5.26□□□□□ -1.57
RPL40BYKR094C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
RPL40BYKR094C REC8Q12188 680 aa5.26□□□□□ -1.57
RPL40BYKR094C BRE4Q07660 1125 aa5.25□□□□□ -1.57
RPL40BYKR094C MSN1P22148 382 aa5.24□□□□□ -1.57
RPL40BYKR094C PAN5P38787 379 aa5.24□□□□□ -1.57
RPL40BYKR094C CPS1P27614 576 aa5.23□□□□□ -1.57
RPL40BYKR094C INP51P40559 946 aaKnown RBP5.23□□□□□ -1.57
RPL40BYKR094C CYC7P00045 113 aa5.22□□□□□ -1.57
RPL40BYKR094C TFA2P36145 328 aa5.22□□□□□ -1.57
RPL40BYKR094C EMG1Q06287 252 aaKnown RBP5.22□□□□□ -1.57
RPL40BYKR094C MAG2Q06436 670 aaKnown RBP5.22□□□□□ -1.57
RPL40BYKR094C PUP1P25043 261 aa5.21□□□□□ -1.58
RPL40BYKR094C AOS1Q06624 347 aa5.21□□□□□ -1.58
RPL40BYKR094C PUN1Q06991 263 aa5.21□□□□□ -1.58
RPL40BYKR094C SPO74P45819 413 aa5.2□□□□□ -1.58
RPL40BYKR094C BIO5P53744 561 aaKnown RBP5.2□□□□□ -1.58
RPL40BYKR094C ALD3P54114 506 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms