RNA–Protein interactions for RNA: YKR039W

GAP1, Transcript of General amino acid permease, yeast

Gene GAP1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAP1	YKR039W	OPI1	P21957	404 aa		11.58	□□□□□ -0.56
GAP1	YKR039W	CWH41	P53008	833 aa		11.58	□□□□□ -0.56
GAP1	YKR039W	YMR147W	P40218	223 aa	Known RBP	11.56	□□□□□ -0.56
GAP1	YKR039W	KRE2	P27809	442 aa		11.56	□□□□□ -0.56
GAP1	YKR039W	SPL2	P38839	148 aa		11.56	□□□□□ -0.56
GAP1	YKR039W	RPT4	P53549	437 aa	Known RBP	11.56	□□□□□ -0.56
GAP1	YKR039W	BBC1	P47068	1157 aa		11.55	□□□□□ -0.56
GAP1	YKR039W	ERO1	Q03103	563 aa		11.55	□□□□□ -0.56
GAP1	YKR039W	DUR1,2	P32528	1835 aa	Known RBP	11.55	□□□□□ -0.56
GAP1	YKR039W	SMY1	P32364	656 aa	Known RBP	11.54	□□□□□ -0.56
GAP1	YKR039W	AIM9	P40053	627 aa	Known RBP	11.54	□□□□□ -0.56
GAP1	YKR039W	SPO22	P40511	975 aa		11.54	□□□□□ -0.56
GAP1	YKR039W	ENP2	P48234	707 aa	Known RBP	11.54	□□□□□ -0.56
GAP1	YKR039W	DJP1	P40564	432 aa		11.53	□□□□□ -0.56
GAP1	YKR039W	MSN5	P52918	1224 aa		11.53	□□□□□ -0.56
GAP1	YKR039W	PKH3	Q03306	898 aa	Predicted RBP	11.53	□□□□□ -0.56
GAP1	YKR039W	ERT1	P38140	529 aa		11.53	□□□□□ -0.56
GAP1	YKR039W	YIR042C	P40586	236 aa		11.53	□□□□□ -0.56
GAP1	YKR039W	VPS20	Q04272	221 aa		11.53	□□□□□ -0.56
GAP1	YKR039W	INM2	Q05533	292 aa		11.53	□□□□□ -0.56
GAP1	YKR039W	PMD1	P32634	1753 aa		11.53	□□□□□ -0.56
GAP1	YKR039W	LAM4	P38800	1345 aa		11.52	□□□□□ -0.56
GAP1	YKR039W	YKL222C	P35995	705 aa		11.52	□□□□□ -0.57
GAP1	YKR039W	IRC4	Q03036	179 aa		11.52	□□□□□ -0.57
GAP1	YKR039W	UBX2	Q04228	584 aa		11.52	□□□□□ -0.57
GAP1	YKR039W	TAH18	Q12181	623 aa		11.52	□□□□□ -0.57
GAP1	YKR039W	NPA3	P47122	385 aa		11.51	□□□□□ -0.57
GAP1	YKR039W	LCB1	P25045	558 aa	Known RBP	11.51	□□□□□ -0.57
GAP1	YKR039W	CIC1	P38779	376 aa	Known RBP	11.51	□□□□□ -0.57
GAP1	YKR039W	CYB2	P00175	591 aa		11.5	□□□□□ -0.57
GAP1	YKR039W	NPL4	P33755	580 aa		11.5	□□□□□ -0.57
GAP1	YKR039W	MET1	P36150	593 aa		11.5	□□□□□ -0.57
GAP1	YKR039W	GRX7	P38068	203 aa		11.5	□□□□□ -0.57
GAP1	YKR039W	SNF7	P39929	240 aa	Known RBP	11.5	□□□□□ -0.57
GAP1	YKR039W	IRC8	P47046	822 aa		11.5	□□□□□ -0.57
GAP1	YKR039W	KAR5	Q04746	504 aa		11.5	□□□□□ -0.57
GAP1	YKR039W	GEF1	P37020	779 aa		11.49	□□□□□ -0.57
GAP1	YKR039W	ROX1	P25042	368 aa		11.49	□□□□□ -0.57
GAP1	YKR039W	MSP1	P28737	362 aa		11.49	□□□□□ -0.57
GAP1	YKR039W	IOC3	P43596	787 aa		11.49	□□□□□ -0.57
GAP1	YKR039W	PSF3	Q12146	194 aa		11.49	□□□□□ -0.57
GAP1	YKR039W	SSF2	Q12153	453 aa	Predicted RBP	11.49	□□□□□ -0.57
GAP1	YKR039W	PGA3	Q12746	312 aa	Known RBP	11.49	□□□□□ -0.57
GAP1	YKR039W	RPT3	P33298	428 aa	Known RBP	11.48	□□□□□ -0.57
GAP1	YKR039W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.48	□□□□□ -0.57	not detected
GAP1	YKR039W	EAF6	P47128	113 aa		11.48	□□□□□ -0.57
GAP1	YKR039W	BIK1	P11709	440 aa		11.47	□□□□□ -0.57
GAP1	YKR039W	RET1	P22276	1149 aa	Known RBP	11.47	□□□□□ -0.57
GAP1	YKR039W	YFH7	P43591	353 aa		11.47	□□□□□ -0.57
GAP1	YKR039W	CTT1	P06115	562 aa		11.46	□□□□□ -0.57
GAP1	YKR039W	RPL19A	P0CX82	189 aa	Known RBP	11.46	□□□□□ -0.57
GAP1	YKR039W	RPL19B	P0CX83	189 aa	Predicted RBP	11.46	□□□□□ -0.57
GAP1	YKR039W	PEP3	P27801	918 aa		11.46	□□□□□ -0.57
GAP1	YKR039W	IMP2'	P32351	346 aa		11.46	□□□□□ -0.57
GAP1	YKR039W	PTK1	P36002	662 aa	Predicted RBP	11.46	□□□□□ -0.57
GAP1	YKR039W	JJJ2	P46997	583 aa		11.46	□□□□□ -0.57
GAP1	YKR039W	ARP5	P53946	755 aa		11.46	□□□□□ -0.57
GAP1	YKR039W	GRX6	Q12438	231 aa		11.46	□□□□□ -0.57
GAP1	YKR039W	CLC1	P17891	233 aa		11.46	□□□□□ -0.58
GAP1	YKR039W	BOI1	P38041	980 aa	Known RBP	11.46	□□□□□ -0.58
GAP1	YKR039W	VID28	P40547	921 aa		11.46	□□□□□ -0.58
GAP1	YKR039W	ESF1	Q06344	628 aa	Known RBP	11.46	□□□□□ -0.58
GAP1	YKR039W	FIG2	P25653	1609 aa		11.45	□□□□□ -0.58
GAP1	YKR039W	BDH2	P39713	417 aa		11.45	□□□□□ -0.58
GAP1	YKR039W	PPM2	Q08282	695 aa		11.45	□□□□□ -0.58
GAP1	YKR039W	TSR3	Q12094	313 aa	Known RBP	11.45	□□□□□ -0.58
GAP1	YKR039W	RRP8	P38961	392 aa	Known RBP	11.44	□□□□□ -0.58
GAP1	YKR039W	COQ1	P18900	473 aa		11.44	□□□□□ -0.58
GAP1	YKR039W	CRG1	P38892	291 aa	RIP-Chip data	11.44	□□□□□ -0.58	not detected
GAP1	YKR039W	SET4	P42948	560 aa		11.44	□□□□□ -0.58
GAP1	YKR039W	YGL081W	P53156	320 aa		11.44	□□□□□ -0.58
GAP1	YKR039W	COG8	Q04632	607 aa		11.44	□□□□□ -0.58
GAP1	YKR039W	HRQ1	Q05549	1077 aa		11.44	□□□□□ -0.58
GAP1	YKR039W	TOS4	Q06266	489 aa		11.44	□□□□□ -0.58
GAP1	YKR039W	SPN1	Q06505	410 aa	Predicted RBP	11.44	□□□□□ -0.58
GAP1	YKR039W	FAS2	P19097	1887 aa	Known RBP	11.43	□□□□□ -0.58
GAP1	YKR039W	MDL2	P33311	773 aa		11.43	□□□□□ -0.58
GAP1	YKR039W	SIS2	P36024	562 aa		11.43	□□□□□ -0.58
GAP1	YKR039W	CTF18	P49956	741 aa		11.43	□□□□□ -0.58
GAP1	YKR039W	KIN4	Q01919	800 aa		11.43	□□□□□ -0.58
GAP1	YKR039W	WRS1	Q12109	432 aa	Known RBP	11.43	□□□□□ -0.58
GAP1	YKR039W	YKU70	P32807	602 aa		11.42	□□□□□ -0.58
GAP1	YKR039W	YKE2	P52553	114 aa		11.42	□□□□□ -0.58
GAP1	YKR039W	HST1	P53685	503 aa		11.42	□□□□□ -0.58
GAP1	YKR039W	HAP5	Q02516	242 aa		11.42	□□□□□ -0.58
GAP1	YKR039W	PSK2	Q08217	1101 aa		11.42	□□□□□ -0.58
GAP1	YKR039W	ICL1	P28240	557 aa	Predicted RBP	11.42	□□□□□ -0.58
GAP1	YKR039W	FBP26	P32604	452 aa		11.42	□□□□□ -0.58
GAP1	YKR039W	TTI1	P36097	1038 aa		11.42	□□□□□ -0.58
GAP1	YKR039W	SLN1	P39928	1220 aa	Predicted RBP	11.42	□□□□□ -0.58
GAP1	YKR039W	TIF4632	P39936	914 aa	Known RBP	11.42	□□□□□ -0.58
GAP1	YKR039W	MATALPHA2	P0CY08	210 aa		11.41	□□□□□ -0.58
GAP1	YKR039W	HMLALPHA2	P0CY09	210 aa		11.41	□□□□□ -0.58
GAP1	YKR039W	ARL1	P38116	183 aa	Known RBP	11.41	□□□□□ -0.58
GAP1	YKR039W	GSM1	P42950	618 aa		11.41	□□□□□ -0.58
GAP1	YKR039W	PRP42	Q03776	544 aa	Known RBP	11.41	□□□□□ -0.58
GAP1	YKR039W	SNF3	P10870	884 aa		11.4	□□□□□ -0.58
GAP1	YKR039W	RER2	P35196	286 aa		11.4	□□□□□ -0.58
GAP1	YKR039W	YHL017W	P38745	532 aa		11.39	□□□□□ -0.59
GAP1	YKR039W	YER156C	P40093	338 aa	Known RBP	11.39	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms