RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W SWE1P32944 819 aa5.84□□□□□ -1.47
TFA1YKL028W ATG3P40344 310 aa5.84□□□□□ -1.47
TFA1YKL028W POL32P47110 350 aa5.84□□□□□ -1.47
TFA1YKL028W RIM21P48565 533 aa5.84□□□□□ -1.47
TFA1YKL028W HDA3Q06623 655 aa5.84□□□□□ -1.47
TFA1YKL028W YDR215CQ12240 137 aa5.84□□□□□ -1.47
TFA1YKL028W ATE1P16639 503 aa5.83□□□□□ -1.48
TFA1YKL028W BOI2P39969 1040 aa5.83□□□□□ -1.48
TFA1YKL028W YJR008WP47085 338 aa5.83□□□□□ -1.48
TFA1YKL028W SUB1P54000 292 aaKnown RBP5.83□□□□□ -1.48
TFA1YKL028W STB3Q12427 513 aa5.83□□□□□ -1.48
TFA1YKL028W YPP1P46951 817 aa5.82□□□□□ -1.48
TFA1YKL028W PDC5P16467 563 aaKnown RBP5.82□□□□□ -1.48
TFA1YKL028W PEP12P32854 288 aa5.82□□□□□ -1.48
TFA1YKL028W MRPL16P38064 232 aa5.82□□□□□ -1.48
TFA1YKL028W RNH70P53331 553 aa5.82□□□□□ -1.48
TFA1YKL028W KNS1P32350 737 aaPredicted RBP5.81□□□□□ -1.48
TFA1YKL028W PPX1P38698 397 aa5.81□□□□□ -1.48
TFA1YKL028W YHL050CP38721 697 aa5.81□□□□□ -1.48
TFA1YKL028W YHR219WP38900 624 aa5.81□□□□□ -1.48
TFA1YKL028W YPQ2Q06328 317 aa5.81□□□□□ -1.48
TFA1YKL028W YOL098CQ12496 1037 aa5.81□□□□□ -1.48
TFA1YKL028W TRL1P09880 827 aaKnown RBP5.8□□□□□ -1.48
TFA1YKL028W ECM23Q02710 187 aa5.8□□□□□ -1.48
TFA1YKL028W KAR5Q04746 504 aa5.8□□□□□ -1.48
TFA1YKL028W SLN1P39928 1220 aaPredicted RBP5.79□□□□□ -1.48
TFA1YKL028W OYE2Q03558 400 aaKnown RBP5.79□□□□□ -1.48
TFA1YKL028W RPS31P05759 152 aaKnown RBP5.78□□□□□ -1.48
TFA1YKL028W SEC8P32855 1065 aa5.78□□□□□ -1.48
TFA1YKL028W MET1P36150 593 aa5.78□□□□□ -1.48
TFA1YKL028W AMN1P38285 549 aaPredicted RBP5.78□□□□□ -1.48
TFA1YKL028W MDJ2P42834 146 aa5.78□□□□□ -1.48
TFA1YKL028W VPS72Q03388 795 aa5.78□□□□□ -1.48
TFA1YKL028W TY1A-DR2Q03964 440 aaKnown RBP5.78□□□□□ -1.48
TFA1YKL028W MAG2Q06436 670 aaKnown RBP5.78□□□□□ -1.48
TFA1YKL028W UBX5Q06682 500 aa5.78□□□□□ -1.48
TFA1YKL028W MCA1Q08601 432 aa5.78□□□□□ -1.48
TFA1YKL028W WHI5Q12416 295 aa5.78□□□□□ -1.48
TFA1YKL028W RRP14P36080 434 aaKnown RBP5.77□□□□□ -1.49
TFA1YKL028W SPR3P41901 512 aa5.77□□□□□ -1.49
TFA1YKL028W OSW7P43611 510 aa5.77□□□□□ -1.49
TFA1YKL028W JIP5Q06214 492 aaPredicted RBP5.77□□□□□ -1.49
TFA1YKL028W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
TFA1YKL028W SWI5P08153 709 aa5.76□□□□□ -1.49
TFA1YKL028W TOM20P35180 183 aa5.76□□□□□ -1.49
TFA1YKL028W GRS1P38088 690 aaKnown RBP5.76□□□□□ -1.49
TFA1YKL028W FPR3P38911 411 aaKnown RBP5.76□□□□□ -1.49
TFA1YKL028W LEU1P07264 779 aaKnown RBP5.75□□□□□ -1.49
TFA1YKL028W GAL2P13181 574 aa5.75□□□□□ -1.49
TFA1YKL028W RDS2P19541 446 aaKnown RBP5.75□□□□□ -1.49
TFA1YKL028W UBX7P38349 436 aa5.75□□□□□ -1.49
TFA1YKL028W TPS3P38426 1054 aaKnown RBP5.75□□□□□ -1.49
TFA1YKL028W AIM9P40053 627 aaKnown RBP5.75□□□□□ -1.49
TFA1YKL028W YJR107WP47145 328 aa5.75□□□□□ -1.49
TFA1YKL028W CWC15Q03772 175 aaKnown RBP5.75□□□□□ -1.49
TFA1YKL028W PPG1P32838 368 aa5.74□□□□□ -1.49
TFA1YKL028W KTR7P40504 517 aa5.74□□□□□ -1.49
TFA1YKL028W THI12P42883 340 aa5.74□□□□□ -1.49
TFA1YKL028W THI5P43534 340 aa5.74□□□□□ -1.49
TFA1YKL028W THI11P47183 340 aa5.74□□□□□ -1.49
TFA1YKL028W THI13Q07748 340 aa5.74□□□□□ -1.49
TFA1YKL028W MGE1P38523 228 aa5.74□□□□□ -1.49
TFA1YKL028W MSC7P38694 644 aa5.74□□□□□ -1.49
TFA1YKL028W ATG1P53104 897 aa5.74□□□□□ -1.49
TFA1YKL028W SRP40P32583 406 aaPredicted RBP5.73□□□□□ -1.49
TFA1YKL028W YNL165WP53891 406 aa5.73□□□□□ -1.49
TFA1YKL028W MCM1P11746 286 aa5.72□□□□□ -1.49
TFA1YKL028W TAT1P38085 619 aa5.72□□□□□ -1.49
TFA1YKL028W LSB6P42951 607 aa5.72□□□□□ -1.49
TFA1YKL028W CIT2P08679 460 aa5.71□□□□□ -1.5
TFA1YKL028W RPS6AP0CX37 236 aaKnown RBP5.71□□□□□ -1.5
TFA1YKL028W RPS6BP0CX38 236 aaPredicted RBP5.71□□□□□ -1.5
TFA1YKL028W TSR4P25040 408 aa5.71□□□□□ -1.5
TFA1YKL028W VAC8P39968 578 aa5.71□□□□□ -1.5
TFA1YKL028W PRY1P47032 299 aa5.71□□□□□ -1.5
TFA1YKL028W ALG12P53730 551 aa5.71□□□□□ -1.5
TFA1YKL028W PUF6Q04373 656 aaKnown RBP5.71□□□□□ -1.5
TFA1YKL028W RGP1P16664 663 aa5.7□□□□□ -1.5
TFA1YKL028W IOC3P43596 787 aa5.7□□□□□ -1.5
TFA1YKL028W ALD3P54114 506 aa5.7□□□□□ -1.5
TFA1YKL028W RPP1AP05318 106 aaPredicted RBP5.69□□□□□ -1.5
TFA1YKL028W MLF3P32047 452 aa5.69□□□□□ -1.5
TFA1YKL028W YKL091CP33324 310 aaKnown RBP5.69□□□□□ -1.5
TFA1YKL028W BOL3P39724 118 aa5.69□□□□□ -1.5
TFA1YKL028W YTA6P40328 754 aa5.69□□□□□ -1.5
TFA1YKL028W TPO2P53283 614 aa5.69□□□□□ -1.5
TFA1YKL028W NUT2Q06213 157 aa5.69□□□□□ -1.5
TFA1YKL028W BUD21Q08492 214 aaPredicted RBP5.69□□□□□ -1.5
TFA1YKL028W MET4P32389 672 aa5.68□□□□□ -1.5
TFA1YKL028W PNP1Q05788 311 aa5.68□□□□□ -1.5
TFA1YKL028W MNL2Q12205 849 aa5.68□□□□□ -1.5
TFA1YKL028W NAB3P38996 802 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
TFA1YKL028W YFL034WP43564 1073 aa5.67□□□□□ -1.5
TFA1YKL028W ACF4P47129 309 aa5.67□□□□□ -1.5
TFA1YKL028W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
TFA1YKL028W ALD6P54115 500 aaKnown RBP5.67□□□□□ -1.5
TFA1YKL028W GIN4Q12263 1142 aa5.67□□□□□ -1.5
TFA1YKL028W FRT1Q99332 602 aa5.67□□□□□ -1.5
TFA1YKL028W SSB1P11484 613 aaKnown RBP5.66□□□□□ -1.5
TFA1YKL028W MAC1P35192 417 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms