RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCD2	YKL027W	GLO3	P38682	493 aa	Known RBP	13.97	□□□□□ -0.17
TCD2	YKL027W	RAD50	P12753	1312 aa		13.96	□□□□□ -0.17
TCD2	YKL027W	ALO1	P54783	526 aa	Known RBP	13.96	□□□□□ -0.17
TCD2	YKL027W	HAL5	P38970	855 aa	Known RBP	13.95	□□□□□ -0.18
TCD2	YKL027W	JJJ2	P46997	583 aa		13.94	□□□□□ -0.18
TCD2	YKL027W	PRP42	Q03776	544 aa	Known RBP	13.94	□□□□□ -0.18
TCD2	YKL027W	BRE1	Q07457	700 aa	Known RBP	13.94	□□□□□ -0.18
TCD2	YKL027W	RRG1	Q12167	365 aa	Predicted RBP	13.94	□□□□□ -0.18
TCD2	YKL027W	MSM1	P22438	575 aa		13.93	□□□□□ -0.18
TCD2	YKL027W	GAS5	Q08193	484 aa		13.93	□□□□□ -0.18
TCD2	YKL027W	WRS1	Q12109	432 aa	Known RBP	13.92	□□□□□ -0.18
TCD2	YKL027W	SLI15	P38283	698 aa		13.91	□□□□□ -0.18
TCD2	YKL027W	YFH7	P43591	353 aa		13.91	□□□□□ -0.18
TCD2	YKL027W	GSM1	P42950	618 aa		13.9	□□□□□ -0.18
TCD2	YKL027W	CRF1	Q04930	467 aa		13.9	□□□□□ -0.18
TCD2	YKL027W	INM2	Q05533	292 aa		13.9	□□□□□ -0.18
TCD2	YKL027W	TOS4	Q06266	489 aa		13.9	□□□□□ -0.18
TCD2	YKL027W	ARG82	P07250	355 aa		13.9	□□□□□ -0.19
TCD2	YKL027W	AFG2	P32794	780 aa		13.9	□□□□□ -0.19
TCD2	YKL027W	EPS1	P40557	701 aa		13.9	□□□□□ -0.19
TCD2	YKL027W	YIR042C	P40586	236 aa		13.9	□□□□□ -0.19
TCD2	YKL027W	MRPS35	P53292	345 aa		13.9	□□□□□ -0.19
TCD2	YKL027W	CYB2	P00175	591 aa		13.89	□□□□□ -0.19
TCD2	YKL027W	OSH3	P38713	996 aa	Known RBP	13.89	□□□□□ -0.19
TCD2	YKL027W	RMD1	Q03441	430 aa		13.89	□□□□□ -0.19
TCD2	YKL027W	RPT3	P33298	428 aa	Known RBP	13.88	□□□□□ -0.19
TCD2	YKL027W	ACK1	Q07622	623 aa	Predicted RBP	13.88	□□□□□ -0.19
TCD2	YKL027W	KTR1	P27810	393 aa	Known RBP	13.87	□□□□□ -0.19
TCD2	YKL027W	NPL4	P33755	580 aa		13.87	□□□□□ -0.19
TCD2	YKL027W	GEF1	P37020	779 aa		13.87	□□□□□ -0.19
TCD2	YKL027W	PBY1	P38254	753 aa		13.87	□□□□□ -0.19
TCD2	YKL027W	VAS1	P07806	1104 aa	Known RBP	13.86	□□□□□ -0.19
TCD2	YKL027W	GLC3	P32775	704 aa		13.86	□□□□□ -0.19
TCD2	YKL027W	PTK1	P36002	662 aa	Predicted RBP	13.86	□□□□□ -0.19
TCD2	YKL027W	RTG2	P32608	588 aa	Known RBP	13.85	□□□□□ -0.19
TCD2	YKL027W	TIM50	Q02776	476 aa		13.85	□□□□□ -0.19
TCD2	YKL027W	RPS7A	P26786	190 aa	Known RBP	13.84	□□□□□ -0.19
TCD2	YKL027W	ENP2	P48234	707 aa	Known RBP	13.84	□□□□□ -0.19
TCD2	YKL027W	PIB2	P53191	635 aa		13.84	□□□□□ -0.19
TCD2	YKL027W	YLR278C	Q05854	1341 aa		13.83	□□□□□ -0.19
TCD2	YKL027W	FLO11	P08640	1367 aa		13.83	□□□□□ -0.2
TCD2	YKL027W	RPC31	P17890	251 aa		13.83	□□□□□ -0.2
TCD2	YKL027W	BOI1	P38041	980 aa	Known RBP	13.83	□□□□□ -0.2
TCD2	YKL027W	TRM44	Q02648	567 aa	Known RBP	13.83	□□□□□ -0.2
TCD2	YKL027W	THS1	P04801	734 aa	Known RBP	13.82	□□□□□ -0.2
TCD2	YKL027W	SNF3	P10870	884 aa		13.82	□□□□□ -0.2
TCD2	YKL027W	MDL2	P33311	773 aa		13.82	□□□□□ -0.2
TCD2	YKL027W	GRX7	P38068	203 aa		13.82	□□□□□ -0.2
TCD2	YKL027W	FET4	P40988	552 aa		13.82	□□□□□ -0.2
TCD2	YKL027W	PUS6	P53294	404 aa		13.82	□□□□□ -0.2
TCD2	YKL027W	SEN54	Q02825	467 aa	Predicted RBP	13.82	□□□□□ -0.2
TCD2	YKL027W	RIM20	Q12033	661 aa		13.82	□□□□□ -0.2
TCD2	YKL027W	OPI1	P21957	404 aa		13.81	□□□□□ -0.2
TCD2	YKL027W	STM1	P39015	273 aa	Known RBP	13.81	□□□□□ -0.2
TCD2	YKL027W	YMR147W	P40218	223 aa	Known RBP	13.81	□□□□□ -0.2
TCD2	YKL027W	NOP2	P40991	618 aa	Known RBP	13.81	□□□□□ -0.2
TCD2	YKL027W	IOC3	P43596	787 aa		13.81	□□□□□ -0.2
TCD2	YKL027W	APL6	P46682	809 aa		13.81	□□□□□ -0.2
TCD2	YKL027W	GCR2	Q01722	534 aa		13.81	□□□□□ -0.2
TCD2	YKL027W	BRN1	P38170	754 aa		13.8	□□□□□ -0.2
TCD2	YKL027W	IRC8	P47046	822 aa		13.8	□□□□□ -0.2
TCD2	YKL027W	BBC1	P47068	1157 aa		13.8	□□□□□ -0.2
TCD2	YKL027W	YGR117C	P53270	476 aa		13.8	□□□□□ -0.2
TCD2	YKL027W	GAP1	P19145	602 aa	Predicted RBP	13.79	□□□□□ -0.2
TCD2	YKL027W	VPS4	P52917	437 aa		13.79	□□□□□ -0.2
TCD2	YKL027W	FPR4	Q06205	392 aa	Predicted RBP	13.79	□□□□□ -0.2
TCD2	YKL027W	AAP1	P37898	856 aa	Known RBP	13.78	□□□□□ -0.2
TCD2	YKL027W	KAR5	Q04746	504 aa		13.78	□□□□□ -0.2
TCD2	YKL027W	TAH18	Q12181	623 aa		13.78	□□□□□ -0.2
TCD2	YKL027W	STV1	P37296	890 aa		13.77	□□□□□ -0.21
TCD2	YKL027W	PIP2	P52960	996 aa		13.77	□□□□□ -0.21
TCD2	YKL027W	PKH3	Q03306	898 aa	Predicted RBP	13.77	□□□□□ -0.21
TCD2	YKL027W	AIM7	Q12156	149 aa		13.77	□□□□□ -0.21
TCD2	YKL027W	HPR1	P17629	752 aa	Known RBP	13.76	□□□□□ -0.21
TCD2	YKL027W	YJL171C	P46992	396 aa		13.76	□□□□□ -0.21
TCD2	YKL027W	PUS5	Q06244	254 aa		13.76	□□□□□ -0.21
TCD2	YKL027W	EMP47	P43555	445 aa		13.75	□□□□□ -0.21
TCD2	YKL027W	PEX21	P50091	288 aa		13.75	□□□□□ -0.21
TCD2	YKL027W	LAM4	P38800	1345 aa		13.75	□□□□□ -0.21
TCD2	YKL027W	TPM1	P17536	199 aa	Known RBP	13.74	□□□□□ -0.21
TCD2	YKL027W	FLO1	P32768	1537 aa		13.74	□□□□□ -0.21
TCD2	YKL027W	DLD1	P32891	587 aa		13.74	□□□□□ -0.21
TCD2	YKL027W	UTP7	P40055	554 aa	Known RBP	13.74	□□□□□ -0.21
TCD2	YKL027W	AAD16	Q02895	342 aa		13.74	□□□□□ -0.21
TCD2	YKL027W	MET1	P36150	593 aa		13.73	□□□□□ -0.21
TCD2	YKL027W	MTC3	P53077	123 aa		13.73	□□□□□ -0.21
TCD2	YKL027W	HXT13	P39924	564 aa		13.7	□□□□□ -0.22
TCD2	YKL027W	HXT17	P53631	564 aa		13.7	□□□□□ -0.22
TCD2	YKL027W	SSF2	Q12153	453 aa	Predicted RBP	13.7	□□□□□ -0.22
TCD2	YKL027W	GSC2	P40989	1895 aa		13.7	□□□□□ -0.22
TCD2	YKL027W	CBP1	P07252	654 aa		13.69	□□□□□ -0.22
TCD2	YKL027W	RRP8	P38961	392 aa	Known RBP	13.69	□□□□□ -0.22
TCD2	YKL027W	MSH4	P40965	878 aa	Predicted RBP	13.69	□□□□□ -0.22
TCD2	YKL027W	NSG2	P53898	299 aa		13.69	□□□□□ -0.22
TCD2	YKL027W	PPM2	Q08282	695 aa		13.69	□□□□□ -0.22
TCD2	YKL027W	SSA4	P22202	642 aa	Known RBP	13.68	□□□□□ -0.22
TCD2	YKL027W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.68	□□□□□ -0.22	not detected
TCD2	YKL027W	SLN1	P39928	1220 aa	Predicted RBP	13.68	□□□□□ -0.22
TCD2	YKL027W	PEA2	P40091	420 aa		13.68	□□□□□ -0.22
TCD2	YKL027W	PCL8	Q08966	492 aa		13.68	□□□□□ -0.22

Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms