RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C SAC7P17121 654 aa3.79□□□□□ -1.8
VPS55YJR044C PGM1P33401 570 aaKnown RBP3.79□□□□□ -1.8
VPS55YJR044C AVT1P47082 602 aa3.79□□□□□ -1.8
VPS55YJR044C SKP1P52286 194 aa3.79□□□□□ -1.8
VPS55YJR044C TRP3P00937 484 aa3.78□□□□□ -1.8
VPS55YJR044C YKR073CP36153 106 aa3.78□□□□□ -1.8
VPS55YJR044C BIM1P40013 344 aa3.78□□□□□ -1.8
VPS55YJR044C ATG32P40458 529 aa3.78□□□□□ -1.8
VPS55YJR044C ACS2P52910 683 aaKnown RBP3.78□□□□□ -1.8
VPS55YJR044C TIF1P10081 395 aaKnown RBP3.77□□□□□ -1.81
VPS55YJR044C RTG2P32608 588 aaKnown RBP3.77□□□□□ -1.81
VPS55YJR044C KAP122P32767 1081 aa3.77□□□□□ -1.81
VPS55YJR044C PEP12P32854 288 aa3.77□□□□□ -1.81
VPS55YJR044C APM2P38700 605 aa3.77□□□□□ -1.81
VPS55YJR044C COQ2P32378 372 aa3.76□□□□□ -1.81
VPS55YJR044C HXT5P38695 592 aa3.76□□□□□ -1.81
VPS55YJR044C ARI1P53111 347 aaKnown RBP3.76□□□□□ -1.81
VPS55YJR044C RPC31P17890 251 aa3.75□□□□□ -1.81
VPS55YJR044C NAB2P32505 525 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
VPS55YJR044C QDR2P40474 542 aa3.75□□□□□ -1.81
VPS55YJR044C UTP4Q06679 776 aaKnown RBP3.75□□□□□ -1.81
VPS55YJR044C YLR122CQ12312 125 aa3.75□□□□□ -1.81
VPS55YJR044C IDI1P15496 288 aa3.74□□□□□ -1.81
VPS55YJR044C NGR1P32831 672 aaKnown RBP3.74□□□□□ -1.81
VPS55YJR044C LIP5P32875 414 aa3.74□□□□□ -1.81
VPS55YJR044C SCD5P34758 872 aa3.74□□□□□ -1.81
VPS55YJR044C KAE1P36132 386 aa3.74□□□□□ -1.81
VPS55YJR044C TED1P40533 473 aa3.74□□□□□ -1.81
VPS55YJR044C MED7Q08278 222 aa3.74□□□□□ -1.81
VPS55YJR044C UBP1P25037 809 aa3.73□□□□□ -1.81
VPS55YJR044C PHO87P25360 923 aa3.73□□□□□ -1.81
VPS55YJR044C SFA1P32771 386 aa3.73□□□□□ -1.81
VPS55YJR044C TOS1P38288 455 aa3.73□□□□□ -1.81
VPS55YJR044C ITC1P53125 1264 aa3.73□□□□□ -1.81
VPS55YJR044C RPL34BP40525 121 aaKnown RBP3.72□□□□□ -1.81
VPS55YJR044C CTH1P47976 325 aa3.72□□□□□ -1.81
VPS55YJR044C YGR130CP53278 816 aa3.72□□□□□ -1.81
VPS55YJR044C NAM7P30771 971 aaKnown RBP3.71□□□□□ -1.82
VPS55YJR044C AKR1P39010 764 aa3.71□□□□□ -1.82
VPS55YJR044C ROM1P53046 1155 aa3.71□□□□□ -1.82
VPS55YJR044C GAS4Q08271 471 aa3.71□□□□□ -1.82
VPS55YJR044C HAP4P14064 554 aa3.7□□□□□ -1.82
VPS55YJR044C RSC6P25632 483 aa3.7□□□□□ -1.82
VPS55YJR044C SOK2P53438 785 aaPredicted RBP3.7□□□□□ -1.82
VPS55YJR044C TY1A-NL1Q12391 440 aaKnown RBP3.7□□□□□ -1.82
VPS55YJR044C TY4B-PA0A0B7P3V8 1104 aa3.69□□□□□ -1.82
VPS55YJR044C BSD2P38356 321 aa3.69□□□□□ -1.82
VPS55YJR044C GIP2P40036 548 aa3.69□□□□□ -1.82
VPS55YJR044C BRE4Q07660 1125 aa3.69□□□□□ -1.82
VPS55YJR044C TY4A-HQ6Q5P6 413 aa3.69□□□□□ -1.82
VPS55YJR044C PUB1P32588 453 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82 RIP-Chip
VPS55YJR044C SAF1P38352 637 aa3.68□□□□□ -1.82
VPS55YJR044C YER156CP40093 338 aaKnown RBP3.68□□□□□ -1.82
VPS55YJR044C YJL181WP46987 611 aa3.68□□□□□ -1.82
VPS55YJR044C FOX2Q02207 900 aaKnown RBP3.68□□□□□ -1.82
VPS55YJR044C CAB1Q04430 367 aa3.68□□□□□ -1.82
VPS55YJR044C CHS2P14180 963 aa3.67□□□□□ -1.82
VPS55YJR044C SUV3P32580 737 aa3.67□□□□□ -1.82
VPS55YJR044C PUF3Q07807 879 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
VPS55YJR044C SLP1Q12232 587 aa3.67□□□□□ -1.82
VPS55YJR044C GAL2P13181 574 aa3.66□□□□□ -1.82
VPS55YJR044C VMA3P25515 160 aa3.66□□□□□ -1.82
VPS55YJR044C MAG2Q06436 670 aaKnown RBP3.66□□□□□ -1.82
VPS55YJR044C YOR296WQ08748 1289 aa3.66□□□□□ -1.82
VPS55YJR044C CYC7P00045 113 aa3.65□□□□□ -1.83
VPS55YJR044C MRPL33P20084 86 aa3.65□□□□□ -1.83
VPS55YJR044C VAN1P23642 535 aa3.65□□□□□ -1.83
VPS55YJR044C AOS1Q06624 347 aa3.65□□□□□ -1.83
VPS55YJR044C REC8Q12188 680 aa3.65□□□□□ -1.83
VPS55YJR044C RQC2Q12532 1038 aaKnown RBP3.65□□□□□ -1.83
VPS55YJR044C SEA4P38164 1038 aa3.64□□□□□ -1.83
VPS55YJR044C PPT1P53043 513 aa3.64□□□□□ -1.83
VPS55YJR044C RNQ1P25367 405 aa3.63□□□□□ -1.83
VPS55YJR044C ELM1P32801 640 aa3.63□□□□□ -1.83
VPS55YJR044C GIP1P38229 639 aa3.63□□□□□ -1.83
VPS55YJR044C DYS1P38791 387 aa3.63□□□□□ -1.83
VPS55YJR044C CWH41P53008 833 aa3.63□□□□□ -1.83
VPS55YJR044C DSE4P53753 1117 aa3.63□□□□□ -1.83
VPS55YJR044C ECM23Q02710 187 aa3.63□□□□□ -1.83
VPS55YJR044C PAN5P38787 379 aa3.62□□□□□ -1.83
VPS55YJR044C TGL4P36165 910 aa3.61□□□□□ -1.83
VPS55YJR044C LDH1P38139 375 aa3.61□□□□□ -1.83
VPS55YJR044C YBR197CP38306 217 aa3.61□□□□□ -1.83
VPS55YJR044C YIL165CP40446 119 aa3.61□□□□□ -1.83
VPS55YJR044C SPO74P45819 413 aa3.61□□□□□ -1.83
VPS55YJR044C SDH1Q00711 640 aa3.61□□□□□ -1.83
VPS55YJR044C RSC2Q06488 889 aa3.61□□□□□ -1.83
VPS55YJR044C TRS33Q99394 268 aa3.61□□□□□ -1.83
VPS55YJR044C TFA2P36145 328 aa3.6□□□□□ -1.83
VPS55YJR044C ISC10P32645 267 aa3.59□□□□□ -1.83
VPS55YJR044C LRG1P35688 1017 aa3.59□□□□□ -1.83
VPS55YJR044C ISW1P38144 1129 aa3.59□□□□□ -1.83
VPS55YJR044C UBX7P38349 436 aa3.59□□□□□ -1.83
VPS55YJR044C INP51P40559 946 aaKnown RBP3.59□□□□□ -1.83
VPS55YJR044C MSN1P22148 382 aa3.58□□□□□ -1.84
VPS55YJR044C SEG2P34250 1132 aa3.58□□□□□ -1.84
VPS55YJR044C SIS2P36024 562 aa3.58□□□□□ -1.84
VPS55YJR044C UBP5P39944 805 aa3.58□□□□□ -1.84
VPS55YJR044C EMG1Q06287 252 aaKnown RBP3.58□□□□□ -1.84
VPS55YJR044C POL5P39985 1022 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms