RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeastyeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC6YJL194W IES1P43579 692 aa5.35□□□□□ -1.55
CDC6YJL194W YJR142WP47173 342 aa5.35□□□□□ -1.55
CDC6YJL194W FUR4P05316 633 aaKnown RBP5.34□□□□□ -1.55
CDC6YJL194W RAD2P07276 1031 aa5.34□□□□□ -1.55
CDC6YJL194W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
CDC6YJL194W DNM1P54861 757 aa5.34□□□□□ -1.55
CDC6YJL194W VMS1Q04311 632 aaKnown RBP5.34□□□□□ -1.55
CDC6YJL194W PUF6Q04373 656 aaKnown RBP5.34□□□□□ -1.55
CDC6YJL194W ENT2Q05785 613 aa5.34□□□□□ -1.55
CDC6YJL194W PIN2Q12057 282 aa5.34□□□□□ -1.55
CDC6YJL194W SSF2Q12153 453 aaPredicted RBP5.34□□□□□ -1.55
CDC6YJL194W TPS3P38426 1054 aaKnown RBP5.33□□□□□ -1.56
CDC6YJL194W SOH1P38633 127 aa5.33□□□□□ -1.56
CDC6YJL194W GLO3P38682 493 aaKnown RBP5.33□□□□□ -1.56
CDC6YJL194W YEN1P40028 759 aa5.33□□□□□ -1.56
CDC6YJL194W VPS16Q03308 798 aa5.33□□□□□ -1.56
CDC6YJL194W COG4Q06096 861 aa5.33□□□□□ -1.56
CDC6YJL194W ATG20Q07528 640 aa5.33□□□□□ -1.56
CDC6YJL194W NKP1Q12493 238 aa5.33□□□□□ -1.56
CDC6YJL194W PWP2P25635 923 aaKnown RBP5.33□□□□□ -1.56
CDC6YJL194W ESF2P53743 316 aaKnown RBP5.33□□□□□ -1.56
CDC6YJL194W CWC15Q03772 175 aaKnown RBP5.33□□□□□ -1.56
CDC6YJL194W NUT2Q06213 157 aa5.33□□□□□ -1.56
CDC6YJL194W ISW1P38144 1129 aa5.32□□□□□ -1.56
CDC6YJL194W YBL086CP38177 466 aa5.32□□□□□ -1.56
CDC6YJL194W FYV10P40492 516 aa5.32□□□□□ -1.56
CDC6YJL194W BUD6P41697 788 aa5.32□□□□□ -1.56
CDC6YJL194W CLA4P48562 842 aa5.32□□□□□ -1.56
CDC6YJL194W CWC24P53769 259 aa5.32□□□□□ -1.56
CDC6YJL194W APP1P53933 587 aa5.32□□□□□ -1.56
CDC6YJL194W PNP1Q05788 311 aa5.32□□□□□ -1.56
CDC6YJL194W MET32Q12041 191 aa5.32□□□□□ -1.56
CDC6YJL194W TRX2P22803 104 aaKnown RBP5.31□□□□□ -1.56
CDC6YJL194W FBP26P32604 452 aa5.31□□□□□ -1.56
CDC6YJL194W PEP7P32609 515 aa5.31□□□□□ -1.56
CDC6YJL194W RPS0AP32905 252 aaKnown RBP5.31□□□□□ -1.56
CDC6YJL194W MKS1P34072 584 aa5.31□□□□□ -1.56
CDC6YJL194W VPS24P36095 224 aaKnown RBP5.31□□□□□ -1.56
CDC6YJL194W UBP12P39538 1254 aa5.31□□□□□ -1.56
CDC6YJL194W QDR1P40475 563 aa5.31□□□□□ -1.56
CDC6YJL194W ISR1Q06098 443 aaKnown RBP5.31□□□□□ -1.56
CDC6YJL194W RPP2BP02400 110 aaKnown RBP5.3□□□□□ -1.56
CDC6YJL194W THS1P04801 734 aaKnown RBP5.3□□□□□ -1.56
CDC6YJL194W AFT1P22149 690 aa5.3□□□□□ -1.56
CDC6YJL194W MET4P32389 672 aa5.3□□□□□ -1.56
CDC6YJL194W RPN12P32496 274 aa5.3□□□□□ -1.56
CDC6YJL194W POL5P39985 1022 aaKnown RBP5.3□□□□□ -1.56
CDC6YJL194W YFL034WP43564 1073 aa5.3□□□□□ -1.56
CDC6YJL194W ACF4P47129 309 aa5.3□□□□□ -1.56
CDC6YJL194W ISU1Q03020 165 aa5.3□□□□□ -1.56
CDC6YJL194W BDF2Q07442 638 aa5.3□□□□□ -1.56
CDC6YJL194W PHO87P25360 923 aa5.29□□□□□ -1.56
CDC6YJL194W FUI1P38196 639 aa5.29□□□□□ -1.56
CDC6YJL194W CRP1P38845 465 aaKnown RBP5.29□□□□□ -1.56
CDC6YJL194W HAL5P38970 855 aaKnown RBP5.29□□□□□ -1.56
CDC6YJL194W BOL3P39724 118 aa5.29□□□□□ -1.56
CDC6YJL194W AIR1P40507 360 aaKnown RBP5.29□□□□□ -1.56
CDC6YJL194W RMD1Q03441 430 aa5.29□□□□□ -1.56
CDC6YJL194W FRT1Q99332 602 aa5.29□□□□□ -1.56
CDC6YJL194W STE6P12866 1290 aa5.28□□□□□ -1.56
CDC6YJL194W MIP1P15801 1254 aa5.28□□□□□ -1.56
CDC6YJL194W BLI1P35727 113 aa5.28□□□□□ -1.56
CDC6YJL194W NUP82P40368 713 aa5.28□□□□□ -1.56
CDC6YJL194W MSB3P48566 633 aaPredicted RBP5.28□□□□□ -1.56
CDC6YJL194W ITC1P53125 1264 aa5.28□□□□□ -1.56
CDC6YJL194W HST3P53687 447 aa5.28□□□□□ -1.56
CDC6YJL194W SPR28Q04921 423 aa5.28□□□□□ -1.56
CDC6YJL194W ESF1Q06344 628 aaKnown RBP5.28□□□□□ -1.56
CDC6YJL194W PUN1Q06991 263 aa5.28□□□□□ -1.56
CDC6YJL194W HAP4P14064 554 aa5.28□□□□□ -1.56
CDC6YJL194W SRM1P21827 482 aa5.28□□□□□ -1.56
CDC6YJL194W RPT1P33299 467 aaKnown RBP5.28□□□□□ -1.56
CDC6YJL194W ASH1P34233 588 aa5.28□□□□□ -1.56
CDC6YJL194W DAK2P43550 591 aa5.28□□□□□ -1.56
CDC6YJL194W TSC13Q99190 310 aa5.28□□□□□ -1.56
CDC6YJL194W TRK1P12685 1235 aa5.27□□□□□ -1.57
CDC6YJL194W MRC1P25588 1096 aa5.27□□□□□ -1.57
CDC6YJL194W MCM2P29469 868 aa5.27□□□□□ -1.57
CDC6YJL194W UTR2P32623 467 aa5.27□□□□□ -1.57
CDC6YJL194W DFG5Q05031 458 aa5.27□□□□□ -1.57
CDC6YJL194W HDA3Q06623 655 aa5.27□□□□□ -1.57
CDC6YJL194W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
CDC6YJL194W PHO8P11491 566 aa5.26□□□□□ -1.57
CDC6YJL194W SRS2P12954 1174 aa5.26□□□□□ -1.57
CDC6YJL194W UGA3P26370 528 aa5.26□□□□□ -1.57
CDC6YJL194W PET112P33893 541 aa5.26□□□□□ -1.57
CDC6YJL194W MPP10P47083 593 aaKnown RBP5.26□□□□□ -1.57
CDC6YJL194W FOL1P53848 824 aa5.26□□□□□ -1.57
CDC6YJL194W SPO20Q04359 397 aa5.26□□□□□ -1.57
CDC6YJL194W GAS4Q08271 471 aa5.26□□□□□ -1.57
CDC6YJL194W BDS1Q08347 646 aa5.26□□□□□ -1.57
CDC6YJL194W YLR125WQ12138 136 aa5.26□□□□□ -1.57
CDC6YJL194W ERP4Q12450 207 aa5.26□□□□□ -1.57
CDC6YJL194W TBS1P38114 1094 aa5.25□□□□□ -1.57
CDC6YJL194W AIM9P40053 627 aaKnown RBP5.25□□□□□ -1.57
CDC6YJL194W ACS2P52910 683 aaKnown RBP5.25□□□□□ -1.57
CDC6YJL194W HUL5P53119 910 aa5.25□□□□□ -1.57
CDC6YJL194W FOX2Q02207 900 aaKnown RBP5.25□□□□□ -1.57
CDC6YJL194W ENP1P38333 483 aaKnown RBP5.24□□□□□ -1.57
CDC6YJL194W ATG16Q03818 150 aa5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms