RNA–Protein interactions for RNA: YJL124C

LSM1, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM1, Length 519 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM1	YJL124C	YGR161W-C	Q3E744	92 aa		4.17	□□□□□ -1.74
LSM1	YJL124C	SUP45	P12385	437 aa	Known RBP	4.16	□□□□□ -1.74
LSM1	YJL124C	GRX7	P38068	203 aa		4.16	□□□□□ -1.74
LSM1	YJL124C	VAC8	P39968	578 aa		4.16	□□□□□ -1.74
LSM1	YJL124C	YIR007W	P40566	764 aa		4.16	□□□□□ -1.74
LSM1	YJL124C	IOC3	P43596	787 aa		4.16	□□□□□ -1.74
LSM1	YJL124C	ESF2	P53743	316 aa	Known RBP	4.16	□□□□□ -1.74
LSM1	YJL124C	DNM1	P54861	757 aa		4.16	□□□□□ -1.74
LSM1	YJL124C	COG4	Q06096	861 aa		4.16	□□□□□ -1.74
LSM1	YJL124C	STB3	Q12427	513 aa		4.16	□□□□□ -1.74
LSM1	YJL124C	NKP1	Q12493	238 aa		4.16	□□□□□ -1.74
LSM1	YJL124C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
LSM1	YJL124C	PWP2	P25635	923 aa	Known RBP	4.15	□□□□□ -1.75
LSM1	YJL124C	TGL4	P36165	910 aa		4.15	□□□□□ -1.75
LSM1	YJL124C	PPX1	P38698	397 aa		4.15	□□□□□ -1.75
LSM1	YJL124C	UBP2	Q01476	1272 aa		4.15	□□□□□ -1.75
LSM1	YJL124C	RPN4	Q03465	531 aa		4.15	□□□□□ -1.75
LSM1	YJL124C	NSE3	Q05541	303 aa		4.15	□□□□□ -1.75
LSM1	YJL124C	ENO1	P00924	437 aa	Known RBP	4.14	□□□□□ -1.75
LSM1	YJL124C	ENO2	P00925	437 aa	Known RBP	4.14	□□□□□ -1.75
LSM1	YJL124C	DPB3	P27344	201 aa		4.14	□□□□□ -1.75
LSM1	YJL124C	SEC6	P32844	805 aa		4.14	□□□□□ -1.75
LSM1	YJL124C	BLI1	P35727	113 aa		4.14	□□□□□ -1.75
LSM1	YJL124C	MGE1	P38523	228 aa		4.14	□□□□□ -1.75
LSM1	YJL124C	HOS4	P40480	1083 aa		4.14	□□□□□ -1.75
LSM1	YJL124C	THI12	P42883	340 aa		4.14	□□□□□ -1.75
LSM1	YJL124C	THI5	P43534	340 aa		4.14	□□□□□ -1.75
LSM1	YJL124C	THI11	P47183	340 aa		4.14	□□□□□ -1.75
LSM1	YJL124C	ALD3	P54114	506 aa		4.14	□□□□□ -1.75
LSM1	YJL124C	UTP14	Q04500	899 aa	Known RBP	4.14	□□□□□ -1.75
LSM1	YJL124C	ISR1	Q06098	443 aa	Known RBP	4.14	□□□□□ -1.75
LSM1	YJL124C	THI13	Q07748	340 aa		4.14	□□□□□ -1.75
LSM1	YJL124C	WHI5	Q12416	295 aa		4.14	□□□□□ -1.75
LSM1	YJL124C	NHA1	Q99271	985 aa		4.14	□□□□□ -1.75
LSM1	YJL124C	TRL1	P09880	827 aa	Known RBP	4.13	□□□□□ -1.75
LSM1	YJL124C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
LSM1	YJL124C	VPS24	P36095	224 aa	Known RBP	4.13	□□□□□ -1.75
LSM1	YJL124C	OSH7	P38755	437 aa		4.13	□□□□□ -1.75
LSM1	YJL124C	HAL5	P38970	855 aa	Known RBP	4.13	□□□□□ -1.75
LSM1	YJL124C	MNN1	P39106	762 aa		4.13	□□□□□ -1.75
LSM1	YJL124C	BUD6	P41697	788 aa		4.13	□□□□□ -1.75
LSM1	YJL124C	YJL049W	P47048	450 aa		4.13	□□□□□ -1.75
LSM1	YJL124C	ENT2	Q05785	613 aa		4.13	□□□□□ -1.75
LSM1	YJL124C	SSF2	Q12153	453 aa	Predicted RBP	4.13	□□□□□ -1.75
LSM1	YJL124C	ERP4	Q12450	207 aa		4.13	□□□□□ -1.75
LSM1	YJL124C	TRX2	P22803	104 aa	Known RBP	4.12	□□□□□ -1.75
LSM1	YJL124C	RPN12	P32496	274 aa		4.12	□□□□□ -1.75
LSM1	YJL124C	MET1	P36150	593 aa		4.12	□□□□□ -1.75
LSM1	YJL124C	FUI1	P38196	639 aa		4.12	□□□□□ -1.75
LSM1	YJL124C	UBP12	P39538	1254 aa		4.12	□□□□□ -1.75
LSM1	YJL124C	MDJ2	P42834	146 aa		4.12	□□□□□ -1.75
LSM1	YJL124C	YJR107W	P47145	328 aa		4.12	□□□□□ -1.75
LSM1	YJL124C	ALD6	P54115	500 aa	Known RBP	4.12	□□□□□ -1.75
LSM1	YJL124C	MEH1	Q02205	184 aa		4.12	□□□□□ -1.75
LSM1	YJL124C	WTM2	Q12206	467 aa		4.12	□□□□□ -1.75
LSM1	YJL124C	THS1	P04801	734 aa	Known RBP	4.11	□□□□□ -1.75
LSM1	YJL124C	MET6	P05694	767 aa	Known RBP	4.11	□□□□□ -1.75
LSM1	YJL124C	SPT2	P06843	333 aa	Predicted RBP	4.11	□□□□□ -1.75
LSM1	YJL124C	DAL5	P15365	543 aa		4.11	□□□□□ -1.75
LSM1	YJL124C	GRS1	P38088	690 aa	Known RBP	4.11	□□□□□ -1.75
LSM1	YJL124C	ENP1	P38333	483 aa	Known RBP	4.11	□□□□□ -1.75
LSM1	YJL124C	SOH1	P38633	127 aa		4.11	□□□□□ -1.75
LSM1	YJL124C	ROG3	P43602	733 aa		4.11	□□□□□ -1.75
LSM1	YJL124C	YJR142W	P47173	342 aa		4.11	□□□□□ -1.75
LSM1	YJL124C	TY1A-MR1	Q04215	440 aa		4.11	□□□□□ -1.75
LSM1	YJL124C	VMS1	Q04311	632 aa	Known RBP	4.11	□□□□□ -1.75
LSM1	YJL124C	KAR5	Q04746	504 aa		4.11	□□□□□ -1.75
LSM1	YJL124C	MRX10	Q05648	414 aa		4.11	□□□□□ -1.75
LSM1	YJL124C	WRS1	Q12109	432 aa	Known RBP	4.11	□□□□□ -1.75
LSM1	YJL124C	MNL2	Q12205	849 aa		4.11	□□□□□ -1.75
LSM1	YJL124C	YOR131C	Q12486	218 aa		4.11	□□□□□ -1.75
LSM1	YJL124C	CCP1	P00431	361 aa		4.1	□□□□□ -1.75
LSM1	YJL124C	CDC19	P00549	500 aa	Known RBP	4.1	□□□□□ -1.75
LSM1	YJL124C	TAF13	P11747	167 aa		4.1	□□□□□ -1.75
LSM1	YJL124C	UTR2	P32623	467 aa		4.1	□□□□□ -1.75
LSM1	YJL124C	NFU1	P32860	256 aa		4.1	□□□□□ -1.75
LSM1	YJL124C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
LSM1	YJL124C	YEN1	P40028	759 aa		4.1	□□□□□ -1.75
LSM1	YJL124C	MAD1	P40957	749 aa		4.1	□□□□□ -1.75
LSM1	YJL124C	MSH4	P40965	878 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM1	YJL124C	YPP1	P46951	817 aa		4.1	□□□□□ -1.75
LSM1	YJL124C	RIM21	P48565	533 aa		4.1	□□□□□ -1.75
LSM1	YJL124C	ITC1	P53125	1264 aa		4.1	□□□□□ -1.75
LSM1	YJL124C	NAM8	Q00539	523 aa	Known RBP	4.1	□□□□□ -1.75
LSM1	YJL124C	CDC53	Q12018	815 aa	Known RBP	4.1	□□□□□ -1.75
LSM1	YJL124C	RPP2B	P02400	110 aa	Known RBP	4.09	□□□□□ -1.75
LSM1	YJL124C	DAT1	P13483	248 aa	Known RBP	4.09	□□□□□ -1.75
LSM1	YJL124C	RDS2	P19541	446 aa	Known RBP	4.09	□□□□□ -1.75
LSM1	YJL124C	OPI1	P21957	404 aa		4.09	□□□□□ -1.75
LSM1	YJL124C	DLD3	P39976	496 aa	Known RBP	4.09	□□□□□ -1.75
LSM1	YJL124C	VTC4	P47075	721 aa		4.09	□□□□□ -1.75
LSM1	YJL124C	ECM23	Q02710	187 aa		4.09	□□□□□ -1.75
LSM1	YJL124C	SVL3	Q03088	825 aa	Known RBP	4.09	□□□□□ -1.75
LSM1	YJL124C	HPF1	Q05164	967 aa		4.09	□□□□□ -1.75
LSM1	YJL124C	UTP13	Q05946	817 aa	Known RBP	4.09	□□□□□ -1.75
LSM1	YJL124C	PSH1	Q12161	406 aa		4.09	□□□□□ -1.75
LSM1	YJL124C	TY4B-P	A0A0B7P3V8	1104 aa		4.08	□□□□□ -1.76
LSM1	YJL124C	CLN2	P20438	545 aa		4.08	□□□□□ -1.76
LSM1	YJL124C	DAL1	P32375	460 aa		4.08	□□□□□ -1.76
LSM1	YJL124C	SSN3	P39073	555 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 69.2 ms