RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W NAB2P32505 525 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
NIC96YFR002W MDJ1P35191 511 aa4.48□□□□□ -1.69
NIC96YFR002W YNR040WP53736 256 aa4.48□□□□□ -1.69
NIC96YFR002W AI1P03875 834 aa4.47□□□□□ -1.69
NIC96YFR002W RPP1AP05318 106 aaPredicted RBP4.47□□□□□ -1.69
NIC96YFR002W PDC5P16467 563 aaKnown RBP4.47□□□□□ -1.69
NIC96YFR002W KNS1P32350 737 aaPredicted RBP4.46□□□□□ -1.69
NIC96YFR002W KTR2P33550 425 aa4.46□□□□□ -1.69
NIC96YFR002W BOI1P38041 980 aaKnown RBP4.46□□□□□ -1.69
NIC96YFR002W NCL1P38205 684 aaKnown RBP4.46□□□□□ -1.7
NIC96YFR002W APM2P38700 605 aa4.46□□□□□ -1.7
NIC96YFR002W THI72Q08579 599 aa4.46□□□□□ -1.7
NIC96YFR002W YOR296WQ08748 1289 aa4.46□□□□□ -1.7
NIC96YFR002W BSD2P38356 321 aa4.45□□□□□ -1.7
NIC96YFR002W DYS1P38791 387 aa4.45□□□□□ -1.7
NIC96YFR002W BOL3P39724 118 aa4.45□□□□□ -1.7
NIC96YFR002W SBE2P42223 864 aaKnown RBP4.45□□□□□ -1.7
NIC96YFR002W HEH2Q03281 663 aa4.45□□□□□ -1.7
NIC96YFR002W SSA1P10591 642 aaKnown RBP4.45□□□□□ -1.7
NIC96YFR002W LDH1P38139 375 aa4.45□□□□□ -1.7
NIC96YFR002W PRK1P40494 810 aa4.45□□□□□ -1.7
NIC96YFR002W ITC1P53125 1264 aa4.45□□□□□ -1.7
NIC96YFR002W NSG2P53898 299 aa4.45□□□□□ -1.7
NIC96YFR002W ICP55P40051 511 aa4.44□□□□□ -1.7
NIC96YFR002W APC11Q12157 165 aa4.44□□□□□ -1.7
NIC96YFR002W LSO1Q3E827 93 aa4.44□□□□□ -1.7
NIC96YFR002W GIP1P38229 639 aa4.43□□□□□ -1.7
NIC96YFR002W PHM7Q12252 991 aa4.43□□□□□ -1.7
NIC96YFR002W IDI1P15496 288 aa4.43□□□□□ -1.7
NIC96YFR002W MSN1P22148 382 aa4.43□□□□□ -1.7
NIC96YFR002W RPL34AP87262 121 aaPredicted RBP4.43□□□□□ -1.7
NIC96YFR002W RPB10P22139 70 aa4.42□□□□□ -1.7
NIC96YFR002W RRN6P32786 894 aa4.42□□□□□ -1.7
NIC96YFR002W YER156CP40093 338 aaKnown RBP4.42□□□□□ -1.7
NIC96YFR002W TDA6Q06466 467 aa4.42□□□□□ -1.7
NIC96YFR002W MRP10O75012 95 aa4.41□□□□□ -1.7
NIC96YFR002W ISW1P38144 1129 aa4.41□□□□□ -1.7
NIC96YFR002W HXT8P40886 569 aa4.41□□□□□ -1.7
NIC96YFR002W FUR4P05316 633 aaKnown RBP4.41□□□□□ -1.7
NIC96YFR002W SUT1P53032 299 aaKnown RBP4.4□□□□□ -1.7
NIC96YFR002W YNR014WP53719 212 aa4.4□□□□□ -1.7
NIC96YFR002W TAF7Q05021 590 aa4.4□□□□□ -1.7
NIC96YFR002W PUS1Q12211 544 aaKnown RBP4.4□□□□□ -1.7
NIC96YFR002W BOI2P39969 1040 aa4.4□□□□□ -1.71
NIC96YFR002W RGD2P43556 714 aa4.4□□□□□ -1.71
NIC96YFR002W GEF1P37020 779 aa4.39□□□□□ -1.71
NIC96YFR002W MCX1P38323 520 aaPredicted RBP4.39□□□□□ -1.71
NIC96YFR002W YIL165CP40446 119 aa4.39□□□□□ -1.71
NIC96YFR002W NAR1P23503 491 aaKnown RBP4.39□□□□□ -1.71
NIC96YFR002W KAR5Q04746 504 aa4.39□□□□□ -1.71
NIC96YFR002W EMG1Q06287 252 aaKnown RBP4.39□□□□□ -1.71
NIC96YFR002W MET1P36150 593 aa4.38□□□□□ -1.71
NIC96YFR002W MTC5Q03897 1148 aa4.38□□□□□ -1.71
NIC96YFR002W PGM2P37012 569 aaKnown RBP4.38□□□□□ -1.71
NIC96YFR002W GIS4Q04233 774 aa4.38□□□□□ -1.71
NIC96YFR002W YPR053CQ6Q5F3 151 aa4.38□□□□□ -1.71
NIC96YFR002W NTA1P40354 457 aa4.37□□□□□ -1.71
NIC96YFR002W ALG14P38242 237 aa4.37□□□□□ -1.71
NIC96YFR002W FIR1P40020 876 aa4.37□□□□□ -1.71
NIC96YFR002W YCK2P23292 546 aaKnown RBP4.36□□□□□ -1.71
NIC96YFR002W CDC3P32457 520 aaKnown RBP4.36□□□□□ -1.71
NIC96YFR002W GLO3P38682 493 aaKnown RBP4.36□□□□□ -1.71
NIC96YFR002W SKN7P38889 622 aa4.36□□□□□ -1.71
NIC96YFR002W QDR1P40475 563 aa4.36□□□□□ -1.71
NIC96YFR002W PPT1P53043 513 aa4.36□□□□□ -1.71
NIC96YFR002W ATG1P53104 897 aa4.36□□□□□ -1.71
NIC96YFR002W YDR215CQ12240 137 aa4.36□□□□□ -1.71
NIC96YFR002W MON2P48563 1636 aaPredicted RBP4.36□□□□□ -1.71
NIC96YFR002W YMR187CQ03236 431 aa4.36□□□□□ -1.71
NIC96YFR002W TIF6Q12522 245 aaKnown RBP4.36□□□□□ -1.71
NIC96YFR002W NHA1Q99271 985 aa4.36□□□□□ -1.71
NIC96YFR002W TRL1P09880 827 aaKnown RBP4.35□□□□□ -1.71
NIC96YFR002W AIM46P38885 310 aa4.35□□□□□ -1.71
NIC96YFR002W RAD55P38953 406 aa4.35□□□□□ -1.71
NIC96YFR002W SMC1P32908 1225 aa4.35□□□□□ -1.71
NIC96YFR002W LSB3P43603 459 aaKnown RBP4.35□□□□□ -1.71
NIC96YFR002W SLN1P39928 1220 aaPredicted RBP4.34□□□□□ -1.71
NIC96YFR002W CCT8P47079 568 aaKnown RBP4.34□□□□□ -1.71
NIC96YFR002W RSC2Q06488 889 aa4.34□□□□□ -1.71
NIC96YFR002W PSY2P40164 858 aa4.34□□□□□ -1.72
NIC96YFR002W YJL181WP46987 611 aa4.34□□□□□ -1.72
NIC96YFR002W IRS4P36115 615 aaKnown RBP4.33□□□□□ -1.72
NIC96YFR002W YBR287WP38355 427 aa4.33□□□□□ -1.72
NIC96YFR002W TFA2P36145 328 aa4.33□□□□□ -1.72
NIC96YFR002W ERP5P38819 212 aa4.33□□□□□ -1.72
NIC96YFR002W INP51P40559 946 aaKnown RBP4.33□□□□□ -1.72
NIC96YFR002W PRY1P47032 299 aa4.33□□□□□ -1.72
NIC96YFR002W ACF4P47129 309 aa4.33□□□□□ -1.72
NIC96YFR002W ALD3P54114 506 aa4.33□□□□□ -1.72
NIC96YFR002W HAT1Q12341 374 aa4.32□□□□□ -1.72
NIC96YFR002W YBL113CQ7M4S9 792 aa4.32□□□□□ -1.72
NIC96YFR002W MDJ2P42834 146 aa4.32□□□□□ -1.72
NIC96YFR002W BUD9P53226 547 aa4.32□□□□□ -1.72
NIC96YFR002W SLP1Q12232 587 aa4.32□□□□□ -1.72
NIC96YFR002W SOK2P53438 785 aaPredicted RBP4.31□□□□□ -1.72
NIC96YFR002W BIO5P53744 561 aaKnown RBP4.31□□□□□ -1.72
NIC96YFR002W UFD2P54860 961 aa4.31□□□□□ -1.72
NIC96YFR002W FUS1P11710 512 aa4.31□□□□□ -1.72
NIC96YFR002W GRS1P38088 690 aaKnown RBP4.31□□□□□ -1.72
NIC96YFR002W TRS120Q04183 1289 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms