RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B SWI5P08153 709 aa2.99□□□□□ -1.93
SBH1YER087C-B NCL1P38205 684 aaKnown RBP2.99□□□□□ -1.93
SBH1YER087C-B NIT1P40447 199 aa2.99□□□□□ -1.93
SBH1YER087C-B TED1P40533 473 aa2.99□□□□□ -1.93
SBH1YER087C-B TFB3Q03290 321 aa2.99□□□□□ -1.93
SBH1YER087C-B TY1A-NL1Q12391 440 aaKnown RBP2.99□□□□□ -1.93
SBH1YER087C-B MRX12P47084 519 aa2.98□□□□□ -1.93
SBH1YER087C-B PRP43P53131 767 aaKnown RBP2.98□□□□□ -1.93
SBH1YER087C-B CBC2Q08920 208 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
SBH1YER087C-B YNR040WP53736 256 aa2.96□□□□□ -1.94
SBH1YER087C-B REC8Q12188 680 aa2.96□□□□□ -1.94
SBH1YER087C-B DFG16Q99234 619 aa2.96□□□□□ -1.94
SBH1YER087C-B TY4B-PA0A0B7P3V8 1104 aa2.95□□□□□ -1.94
SBH1YER087C-B TY4A-HQ6Q5P6 413 aa2.95□□□□□ -1.94
SBH1YER087C-B ECL1P48235 211 aa2.94□□□□□ -1.94
SBH1YER087C-B TAD3Q9URQ3 322 aa2.94□□□□□ -1.94
SBH1YER087C-B GCD1P09032 578 aaPredicted RBP2.93□□□□□ -1.94
SBH1YER087C-B YDJ1P25491 409 aaKnown RBP2.93□□□□□ -1.94
SBH1YER087C-B YHL008CP38750 627 aa2.93□□□□□ -1.94
SBH1YER087C-B CUS1Q02554 436 aaPredicted RBP2.93□□□□□ -1.94
SBH1YER087C-B SOK2P53438 785 aaPredicted RBP2.92□□□□□ -1.94
SBH1YER087C-B RPS6AP0CX37 236 aaKnown RBP2.91□□□□□ -1.94
SBH1YER087C-B RPS6BP0CX38 236 aaPredicted RBP2.91□□□□□ -1.94
SBH1YER087C-B MSB1P21339 1137 aaKnown RBP2.91□□□□□ -1.94
SBH1YER087C-B YPT53P36019 220 aa2.91□□□□□ -1.94
SBH1YER087C-B GIP2P40036 548 aa2.91□□□□□ -1.94
SBH1YER087C-B YNR021WP53723 404 aaKnown RBP2.91□□□□□ -1.94
SBH1YER087C-B YNR065CP53751 1116 aa2.91□□□□□ -1.94
SBH1YER087C-B APM2P38700 605 aa2.9□□□□□ -1.95
SBH1YER087C-B AIM9P40053 627 aaKnown RBP2.9□□□□□ -1.95
SBH1YER087C-B SLP1Q12232 587 aa2.9□□□□□ -1.95
SBH1YER087C-B DSE4P53753 1117 aa2.89□□□□□ -1.95
SBH1YER087C-B SKP1P52286 194 aa2.88□□□□□ -1.95
SBH1YER087C-B CDA2Q06703 312 aa2.88□□□□□ -1.95
SBH1YER087C-B IDI1P15496 288 aa2.87□□□□□ -1.95
SBH1YER087C-B NTH2P35172 780 aa2.87□□□□□ -1.95
SBH1YER087C-B THI80P35202 319 aa2.87□□□□□ -1.95
SBH1YER087C-B FLR1P38124 548 aa2.87□□□□□ -1.95
SBH1YER087C-B UTP13Q05946 817 aaKnown RBP2.87□□□□□ -1.95
SBH1YER087C-B HDA2Q06629 674 aa2.87□□□□□ -1.95
SBH1YER087C-B MCM1P11746 286 aa2.86□□□□□ -1.95
SBH1YER087C-B ATG3P40344 310 aa2.86□□□□□ -1.95
SBH1YER087C-B SAS10Q12136 610 aaPredicted RBP2.86□□□□□ -1.95
SBH1YER087C-B KAP122P32767 1081 aa2.84□□□□□ -1.95
SBH1YER087C-B TSA1P34760 196 aaKnown RBP2.84□□□□□ -1.95
SBH1YER087C-B YJL181WP46987 611 aa2.84□□□□□ -1.95
SBH1YER087C-B YML122CQ03207 126 aa2.84□□□□□ -1.95
SBH1YER087C-B MSH6Q03834 1242 aa2.83□□□□□ -1.96
SBH1YER087C-B SSA2P10592 639 aaKnown RBP2.82□□□□□ -1.96
SBH1YER087C-B NFS1P25374 497 aa2.82□□□□□ -1.96
SBH1YER087C-B HSP78P33416 811 aa2.82□□□□□ -1.96
SBH1YER087C-B PDI1P17967 522 aaKnown RBP2.81□□□□□ -1.96
SBH1YER087C-B AIM7Q12156 149 aa2.81□□□□□ -1.96
SBH1YER087C-B CSE4P36012 229 aa2.8□□□□□ -1.96
SBH1YER087C-B GIC2Q06648 383 aa2.8□□□□□ -1.96
SBH1YER087C-B SPT5P27692 1063 aaKnown RBP2.79□□□□□ -1.96
SBH1YER087C-B PAN5P38787 379 aa2.79□□□□□ -1.96
SBH1YER087C-B ITC1P53125 1264 aa2.79□□□□□ -1.96
SBH1YER087C-B NCE103P53615 221 aa2.79□□□□□ -1.96
SBH1YER087C-B YBL036CP38197 257 aa2.78□□□□□ -1.96
SBH1YER087C-B RPC31P17890 251 aa2.77□□□□□ -1.97
SBH1YER087C-B WHI3P34761 661 aaKnown RBP2.77□□□□□ -1.97
SBH1YER087C-B AIM3P38266 947 aaKnown RBP2.77□□□□□ -1.97
SBH1YER087C-B QDR2P40474 542 aa2.77□□□□□ -1.97
SBH1YER087C-B YFL034WP43564 1073 aa2.77□□□□□ -1.97
SBH1YER087C-B CYT1P07143 309 aa2.76□□□□□ -1.97
SBH1YER087C-B PRP6P19735 899 aaPredicted RBP2.76□□□□□ -1.97
SBH1YER087C-B MAE1P36013 669 aaKnown RBP2.76□□□□□ -1.97
SBH1YER087C-B PNS1Q12412 539 aa2.76□□□□□ -1.97
SBH1YER087C-B ABZ1P37254 787 aaPredicted RBP2.75□□□□□ -1.97
SBH1YER087C-B YER156CP40093 338 aaKnown RBP2.75□□□□□ -1.97
SBH1YER087C-B GSF2Q04697 403 aaKnown RBP2.75□□□□□ -1.97
SBH1YER087C-B NSI1Q12457 570 aa2.75□□□□□ -1.97
SBH1YER087C-B YPP1P46951 817 aa2.74□□□□□ -1.97
SBH1YER087C-B KIP3P53086 805 aaKnown RBP2.74□□□□□ -1.97
SBH1YER087C-B ENO2P00925 437 aaKnown RBP2.73□□□□□ -1.97
SBH1YER087C-B MMM1P41800 426 aa2.73□□□□□ -1.97
SBH1YER087C-B UTP4Q06679 776 aaKnown RBP2.73□□□□□ -1.97
SBH1YER087C-B TUB2P02557 457 aaKnown RBP2.72□□□□□ -1.97
SBH1YER087C-B ERS1P17261 260 aa2.72□□□□□ -1.97
SBH1YER087C-B PPT1P53043 513 aa2.72□□□□□ -1.97
SBH1YER087C-B YNL108CP53929 270 aa2.72□□□□□ -1.97
SBH1YER087C-B RDS2P19541 446 aaKnown RBP2.71□□□□□ -1.98
SBH1YER087C-B POL5P39985 1022 aaKnown RBP2.71□□□□□ -1.98
SBH1YER087C-B RCM1P53972 490 aa2.71□□□□□ -1.98
SBH1YER087C-B TOD6P34219 525 aa2.7□□□□□ -1.98
SBH1YER087C-B SCD5P34758 872 aa2.7□□□□□ -1.98
SBH1YER087C-B BSD2P38356 321 aa2.7□□□□□ -1.98
SBH1YER087C-B CIT3P43635 486 aa2.7□□□□□ -1.98
SBH1YER087C-B ELG1Q12050 791 aa2.7□□□□□ -1.98
SBH1YER087C-B HXT5P38695 592 aa2.69□□□□□ -1.98
SBH1YER087C-B RSC2Q06488 889 aa2.69□□□□□ -1.98
SBH1YER087C-B TSC13Q99190 310 aa2.69□□□□□ -1.98
SBH1YER087C-B BIO2P32451 375 aa2.68□□□□□ -1.98
SBH1YER087C-B SHM2P37291 469 aaKnown RBP2.68□□□□□ -1.98
SBH1YER087C-B INP51P40559 946 aaKnown RBP2.68□□□□□ -1.98
SBH1YER087C-B ADP1P25371 1049 aa2.67□□□□□ -1.98
SBH1YER087C-B MRPL22P53881 309 aa2.66□□□□□ -1.98
SBH1YER087C-B SSY1Q03770 852 aa2.66□□□□□ -1.98
SBH1YER087C-B YOR296WQ08748 1289 aa2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms