RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C MCA1Q08601 432 aa5.46□□□□□ -1.53
SNU56YDR240C PUP1P25043 261 aa5.45□□□□□ -1.54
SNU56YDR240C ALD2P47771 506 aa5.45□□□□□ -1.54
SNU56YDR240C HXT5P38695 592 aa5.45□□□□□ -1.54
SNU56YDR240C Q0182Q9ZZW1 134 aa5.45□□□□□ -1.54
SNU56YDR240C RGP1P16664 663 aa5.44□□□□□ -1.54
SNU56YDR240C UBX7P38349 436 aa5.44□□□□□ -1.54
SNU56YDR240C PUF6Q04373 656 aaKnown RBP5.44□□□□□ -1.54
SNU56YDR240C MSC7P38694 644 aa5.41□□□□□ -1.54
SNU56YDR240C PRY1P47032 299 aa5.4□□□□□ -1.54
SNU56YDR240C SKP1P52286 194 aa5.4□□□□□ -1.54
SNU56YDR240C CAB1Q04430 367 aa5.4□□□□□ -1.54
SNU56YDR240C GLT1Q12680 2145 aaKnown RBP5.4□□□□□ -1.55
SNU56YDR240C SUV3P32580 737 aa5.39□□□□□ -1.55
SNU56YDR240C KAP122P32767 1081 aa5.39□□□□□ -1.55
SNU56YDR240C MAC1P35192 417 aa5.39□□□□□ -1.55
SNU56YDR240C MTO1P53070 669 aa5.39□□□□□ -1.55
SNU56YDR240C HEH2Q03281 663 aa5.39□□□□□ -1.55
SNU56YDR240C YPL034WQ03083 165 aa5.39□□□□□ -1.55
SNU56YDR240C SRS2P12954 1174 aa5.38□□□□□ -1.55
SNU56YDR240C RPC31P17890 251 aa5.38□□□□□ -1.55
SNU56YDR240C ALD4P46367 519 aaKnown RBP5.38□□□□□ -1.55
SNU56YDR240C NOB1Q08444 459 aaKnown RBP5.38□□□□□ -1.55
SNU56YDR240C MRPL33P20084 86 aa5.37□□□□□ -1.55
SNU56YDR240C NCL1P38205 684 aaKnown RBP5.37□□□□□ -1.55
SNU56YDR240C TPS3P38426 1054 aaKnown RBP5.37□□□□□ -1.55
SNU56YDR240C CUS1Q02554 436 aaPredicted RBP5.37□□□□□ -1.55
SNU56YDR240C CWC15Q03772 175 aaKnown RBP5.37□□□□□ -1.55
SNU56YDR240C PUN1Q06991 263 aa5.36□□□□□ -1.55
SNU56YDR240C SUB2Q07478 446 aaKnown RBP5.36□□□□□ -1.55
SNU56YDR240C YBR197CP38306 217 aa5.35□□□□□ -1.55
SNU56YDR240C DYS1P38791 387 aa5.35□□□□□ -1.55
SNU56YDR240C QDR2P40474 542 aa5.35□□□□□ -1.55
SNU56YDR240C FOX2Q02207 900 aaKnown RBP5.35□□□□□ -1.55
SNU56YDR240C YML083CQ04526 418 aa5.35□□□□□ -1.55
SNU56YDR240C NHA1Q99271 985 aa5.35□□□□□ -1.55
SNU56YDR240C APM2P38700 605 aa5.34□□□□□ -1.55
SNU56YDR240C VMA3P25515 160 aa5.33□□□□□ -1.56
SNU56YDR240C ISC10P32645 267 aa5.32□□□□□ -1.56
SNU56YDR240C PGM2P37012 569 aaKnown RBP5.32□□□□□ -1.56
SNU56YDR240C ALG14P38242 237 aa5.32□□□□□ -1.56
SNU56YDR240C BUD9P53226 547 aa5.32□□□□□ -1.56
SNU56YDR240C ALO1P54783 526 aaKnown RBP5.32□□□□□ -1.56
SNU56YDR240C YOR296WQ08748 1289 aa5.32□□□□□ -1.56
SNU56YDR240C LDH1P38139 375 aa5.32□□□□□ -1.56
SNU56YDR240C RRN6P32786 894 aa5.31□□□□□ -1.56
SNU56YDR240C OMA1P36163 345 aa5.31□□□□□ -1.56
SNU56YDR240C YER156CP40093 338 aaKnown RBP5.31□□□□□ -1.56
SNU56YDR240C INP52P50942 1183 aa5.31□□□□□ -1.56
SNU56YDR240C PNP1Q05788 311 aa5.31□□□□□ -1.56
SNU56YDR240C GIP1P38229 639 aa5.3□□□□□ -1.56
SNU56YDR240C PRK1P40494 810 aa5.3□□□□□ -1.56
SNU56YDR240C ISW1P38144 1129 aa5.29□□□□□ -1.56
SNU56YDR240C YBR287WP38355 427 aa5.29□□□□□ -1.56
SNU56YDR240C IRC24P40580 263 aa5.29□□□□□ -1.56
SNU56YDR240C ITC1P53125 1264 aa5.28□□□□□ -1.56
SNU56YDR240C YNR040WP53736 256 aa5.28□□□□□ -1.56
SNU56YDR240C APC11Q12157 165 aa5.28□□□□□ -1.56
SNU56YDR240C AI3P03877 415 aa5.27□□□□□ -1.57
SNU56YDR240C IDI1P15496 288 aa5.27□□□□□ -1.57
SNU56YDR240C NAR1P23503 491 aaKnown RBP5.27□□□□□ -1.57
SNU56YDR240C GIS4Q04233 774 aa5.27□□□□□ -1.57
SNU56YDR240C RSC2Q06488 889 aa5.27□□□□□ -1.57
SNU56YDR240C LSO1Q3E827 93 aa5.27□□□□□ -1.57
SNU56YDR240C BSD2P38356 321 aa5.26□□□□□ -1.57
SNU56YDR240C RPL34AP87262 121 aaPredicted RBP5.26□□□□□ -1.57
SNU56YDR240C FUR4P05316 633 aaKnown RBP5.26□□□□□ -1.57
SNU56YDR240C SSA1P10591 642 aaKnown RBP5.26□□□□□ -1.57
SNU56YDR240C MSN1P22148 382 aa5.26□□□□□ -1.57
SNU56YDR240C PGM1P33401 570 aaKnown RBP5.26□□□□□ -1.57
SNU56YDR240C HXT8P40886 569 aa5.26□□□□□ -1.57
SNU56YDR240C NAB2P32505 525 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
SNU56YDR240C FIR1P40020 876 aa5.25□□□□□ -1.57
SNU56YDR240C SLP1Q12232 587 aa5.25□□□□□ -1.57
SNU56YDR240C SAC7P17121 654 aa5.24□□□□□ -1.57
SNU56YDR240C YIL165CP40446 119 aa5.24□□□□□ -1.57
SNU56YDR240C RRM3P38766 723 aa5.23□□□□□ -1.57
SNU56YDR240C ARI1P53111 347 aaKnown RBP5.23□□□□□ -1.57
SNU56YDR240C SFA1P32771 386 aa5.22□□□□□ -1.57
SNU56YDR240C SMC1P32908 1225 aa5.22□□□□□ -1.57
SNU56YDR240C BOI1P38041 980 aaKnown RBP5.22□□□□□ -1.57
SNU56YDR240C NTA1P40354 457 aa5.22□□□□□ -1.57
SNU56YDR240C KTR2P33550 425 aa5.21□□□□□ -1.58
SNU56YDR240C BOL3P39724 118 aa5.21□□□□□ -1.58
SNU56YDR240C GAS5Q08193 484 aa5.21□□□□□ -1.58
SNU56YDR240C AIM46P38885 310 aa5.2□□□□□ -1.58
SNU56YDR240C SUT1P53032 299 aaKnown RBP5.2□□□□□ -1.58
SNU56YDR240C PPT1P53043 513 aa5.2□□□□□ -1.58
SNU56YDR240C RGD2P43556 714 aa5.2□□□□□ -1.58
SNU56YDR240C KAR5Q04746 504 aa5.2□□□□□ -1.58
SNU56YDR240C EMG1Q06287 252 aaKnown RBP5.2□□□□□ -1.58
SNU56YDR240C MRP10O75012 95 aa5.19□□□□□ -1.58
SNU56YDR240C RPB10P22139 70 aa5.19□□□□□ -1.58
SNU56YDR240C COQ2P32378 372 aa5.19□□□□□ -1.58
SNU56YDR240C RAD55P38953 406 aa5.19□□□□□ -1.58
SNU56YDR240C ATG1P53104 897 aa5.19□□□□□ -1.58
SNU56YDR240C MED7Q08278 222 aa5.19□□□□□ -1.58
SNU56YDR240C IRS4P36115 615 aaKnown RBP5.18□□□□□ -1.58
SNU56YDR240C GEF1P37020 779 aa5.18□□□□□ -1.58
SNU56YDR240C AVT1P47082 602 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms