RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	SDH2	P21801	266 aa		5.82	□□□□□ -1.48
SUP35	YDR172W	NTH2	P35172	780 aa		5.82	□□□□□ -1.48
SUP35	YDR172W	YBR287W	P38355	427 aa		5.82	□□□□□ -1.48
SUP35	YDR172W	RRT14	P40470	206 aa		5.82	□□□□□ -1.48
SUP35	YDR172W	TCB1	Q12466	1186 aa		5.81	□□□□□ -1.48
SUP35	YDR172W	HSP104	P31539	908 aa	Known RBP	5.81	□□□□□ -1.48
SUP35	YDR172W	TUB4	P53378	473 aa		5.81	□□□□□ -1.48
SUP35	YDR172W	YNL050C	P53952	270 aa		5.81	□□□□□ -1.48
SUP35	YDR172W	HPC2	Q01448	625 aa		5.81	□□□□□ -1.48
SUP35	YDR172W	SSA2	P10592	639 aa	Known RBP	5.8	□□□□□ -1.48
SUP35	YDR172W	RRN7	P40992	514 aa		5.8	□□□□□ -1.48
SUP35	YDR172W	GYP7	P48365	746 aa		5.8	□□□□□ -1.48
SUP35	YDR172W	PUF6	Q04373	656 aa	Known RBP	5.8	□□□□□ -1.48
SUP35	YDR172W	RSF2	P46974	1380 aa		5.8	□□□□□ -1.48
SUP35	YDR172W	SIR4	P11978	1358 aa		5.79	□□□□□ -1.48
SUP35	YDR172W	PAC1	P39946	494 aa	Known RBP	5.79	□□□□□ -1.48
SUP35	YDR172W	XKS1	P42826	600 aa		5.79	□□□□□ -1.48
SUP35	YDR172W	ZDS1	P50111	915 aa	Known RBP	5.79	□□□□□ -1.48
SUP35	YDR172W	PKH3	Q03306	898 aa	Predicted RBP	5.79	□□□□□ -1.48
SUP35	YDR172W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
SUP35	YDR172W	ENT1	Q12518	454 aa		5.79	□□□□□ -1.48
SUP35	YDR172W	TRM1	P15565	570 aa	Known RBP	5.78	□□□□□ -1.48
SUP35	YDR172W	RSC30	P38781	883 aa		5.78	□□□□□ -1.48
SUP35	YDR172W	APP1	P53933	587 aa		5.78	□□□□□ -1.48
SUP35	YDR172W	SRT1	Q03175	343 aa		5.78	□□□□□ -1.48
SUP35	YDR172W	YRF1-3	P0CX14	1859 aa		5.78	□□□□□ -1.48
SUP35	YDR172W	YRF1-7	P0CX15	1859 aa		5.78	□□□□□ -1.48
SUP35	YDR172W	YRF1-6	P53819	1859 aa		5.78	□□□□□ -1.48
SUP35	YDR172W	TFB3	Q03290	321 aa		5.78	□□□□□ -1.48
SUP35	YDR172W	COQ4	O13525	335 aa		5.77	□□□□□ -1.49
SUP35	YDR172W	PUS6	P53294	404 aa		5.77	□□□□□ -1.49
SUP35	YDR172W	BMS1	Q08965	1183 aa	Known RBP	5.77	□□□□□ -1.49
SUP35	YDR172W	SPT16	P32558	1035 aa	Known RBP	5.76	□□□□□ -1.49
SUP35	YDR172W	OPY1	P38271	328 aa		5.76	□□□□□ -1.49
SUP35	YDR172W	MAM1	P40065	302 aa		5.76	□□□□□ -1.49
SUP35	YDR172W	DMA2	P53924	522 aa		5.76	□□□□□ -1.49
SUP35	YDR172W	AOS1	Q06624	347 aa		5.76	□□□□□ -1.49
SUP35	YDR172W	ENV9	Q08651	330 aa		5.76	□□□□□ -1.49
SUP35	YDR172W	RAD59	Q12223	238 aa		5.76	□□□□□ -1.49
SUP35	YDR172W	YFR016C	P43597	1233 aa	Known RBP	5.76	□□□□□ -1.49
SUP35	YDR172W	CSI1	Q04368	295 aa		5.76	□□□□□ -1.49
SUP35	YDR172W	LAM6	Q08001	693 aa		5.75	□□□□□ -1.49
SUP35	YDR172W	PAT1	P25644	796 aa	Known RBP	5.75	□□□□□ -1.49
SUP35	YDR172W	YGR122W	P53272	402 aa		5.75	□□□□□ -1.49
SUP35	YDR172W	CTF4	Q01454	927 aa		5.75	□□□□□ -1.49
SUP35	YDR172W	IMH1	Q06704	911 aa	Known RBP	5.75	□□□□□ -1.49
SUP35	YDR172W	ARG8	P18544	423 aa		5.74	□□□□□ -1.49
SUP35	YDR172W	PKC1	P24583	1151 aa		5.74	□□□□□ -1.49
SUP35	YDR172W	MRF1	P30775	413 aa	Predicted RBP	5.74	□□□□□ -1.49
SUP35	YDR172W	IME2	P32581	645 aa		5.74	□□□□□ -1.49
SUP35	YDR172W	MEC3	Q02574	474 aa		5.73	□□□□□ -1.49
SUP35	YDR172W	YDL206W	Q12424	762 aa		5.73	□□□□□ -1.49
SUP35	YDR172W	MOD5	P07884	428 aa		5.73	□□□□□ -1.49
SUP35	YDR172W	YPP1	P46951	817 aa		5.73	□□□□□ -1.49
SUP35	YDR172W	TBF1	Q02457	562 aa		5.73	□□□□□ -1.49
SUP35	YDR172W	ROM2	P51862	1356 aa	Known RBP	5.73	□□□□□ -1.49
SUP35	YDR172W	RIM15	P43565	1770 aa		5.72	□□□□□ -1.49
SUP35	YDR172W	PDC1	P06169	563 aa	Known RBP	5.72	□□□□□ -1.49
SUP35	YDR172W	KCC4	P25389	1037 aa		5.72	□□□□□ -1.49
SUP35	YDR172W	BRL1	P38770	471 aa		5.72	□□□□□ -1.49
SUP35	YDR172W	YNG2	P38806	282 aa	Known RBP	5.72	□□□□□ -1.49
SUP35	YDR172W	ZDS2	P54786	942 aa		5.72	□□□□□ -1.49
SUP35	YDR172W	INP54	Q08227	384 aa	Known RBP	5.72	□□□□□ -1.49
SUP35	YDR172W	EDE1	P34216	1381 aa		5.72	□□□□□ -1.49
SUP35	YDR172W	NUP145	P49687	1317 aa		5.72	□□□□□ -1.49
SUP35	YDR172W	RAD4	P14736	754 aa		5.71	□□□□□ -1.49
SUP35	YDR172W	RAD24	P32641	659 aa		5.71	□□□□□ -1.49
SUP35	YDR172W	YKL133C	P36066	463 aa		5.71	□□□□□ -1.49
SUP35	YDR172W	YIR014W	P40570	242 aa		5.71	□□□□□ -1.49
SUP35	YDR172W	RPA14	P50106	137 aa		5.71	□□□□□ -1.49
SUP35	YDR172W	SPO1	P53541	631 aa		5.71	□□□□□ -1.49
SUP35	YDR172W	ADE16	P54113	591 aa	Known RBP	5.71	□□□□□ -1.49
SUP35	YDR172W	ERG12	P07277	443 aa		5.71	□□□□□ -1.5
SUP35	YDR172W	UGA3	P26370	528 aa		5.71	□□□□□ -1.5
SUP35	YDR172W	CST6	P40535	587 aa		5.71	□□□□□ -1.5
SUP35	YDR172W	FRK1	Q03002	865 aa	Predicted RBP	5.71	□□□□□ -1.5
SUP35	YDR172W	NSE3	Q05541	303 aa		5.71	□□□□□ -1.5
SUP35	YDR172W	LYS2	P07702	1392 aa		5.7	□□□□□ -1.5
SUP35	YDR172W	SWC3	P31376	625 aa		5.7	□□□□□ -1.5
SUP35	YDR172W	YOL057W	Q08225	711 aa		5.7	□□□□□ -1.5
SUP35	YDR172W	ALE1	Q08548	619 aa		5.7	□□□□□ -1.5
SUP35	YDR172W	RAS1	P01119	309 aa		5.7	□□□□□ -1.5
SUP35	YDR172W	RPS19A	P07280	144 aa	Known RBP	5.7	□□□□□ -1.5
SUP35	YDR172W	RPS19B	P07281	144 aa	Predicted RBP	5.7	□□□□□ -1.5
SUP35	YDR172W	AMS1	P22855	1083 aa		5.7	□□□□□ -1.5
SUP35	YDR172W	ATG13	Q06628	738 aa		5.7	□□□□□ -1.5
SUP35	YDR172W	YPR097W	Q06839	1073 aa		5.7	□□□□□ -1.5
SUP35	YDR172W	OSM1	P21375	501 aa	Known RBP	5.69	□□□□□ -1.5
SUP35	YDR172W	KXD1	P53158	218 aa		5.69	□□□□□ -1.5
SUP35	YDR172W	YEL077C	Q3E7X8	1277 aa		5.69	□□□□□ -1.5
SUP35	YDR172W	NKP2	Q06162	153 aa		5.68	□□□□□ -1.5
SUP35	YDR172W	NOP8	Q08287	484 aa	Predicted RBP	5.68	□□□□□ -1.5
SUP35	YDR172W	MRP7	P12687	371 aa		5.68	□□□□□ -1.5
SUP35	YDR172W	RFC1	P38630	861 aa	Known RBP	5.68	□□□□□ -1.5
SUP35	YDR172W	HXT10	P43581	546 aa		5.68	□□□□□ -1.5
SUP35	YDR172W	BDP1	P46678	594 aa		5.68	□□□□□ -1.5
SUP35	YDR172W	YDR306C	Q06640	478 aa		5.68	□□□□□ -1.5
SUP35	YDR172W	ALR1	Q08269	859 aa		5.68	□□□□□ -1.5
SUP35	YDR172W	NMD2	P38798	1089 aa	Known RBP	5.67	□□□□□ -1.5
SUP35	YDR172W	MAK16	P10962	306 aa	Predicted RBP	5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms