RNA–Protein interactions for RNA: YDL128W

VCX1, Transcript of Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity, yeastyeast

Gene VCX1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VCX1YDL128W TY1A-BLQ12266 440 aa6.8□□□□□ -1.32
VCX1YDL128W TCB1Q12466 1186 aa6.8□□□□□ -1.32
VCX1YDL128W CHC1P22137 1653 aaKnown RBP6.8□□□□□ -1.32
VCX1YDL128W ISF1P32488 338 aa6.79□□□□□ -1.32
VCX1YDL128W FBP26P32604 452 aa6.79□□□□□ -1.32
VCX1YDL128W YIR007WP40566 764 aa6.79□□□□□ -1.32
VCX1YDL128W YJR098CP47139 656 aa6.79□□□□□ -1.32
VCX1YDL128W YRB30P53107 440 aaPredicted RBP6.79□□□□□ -1.32
VCX1YDL128W STE20Q03497 939 aaKnown RBP6.79□□□□□ -1.32
VCX1YDL128W NAF1P53919 492 aaKnown RBP6.78□□□□□ -1.32
VCX1YDL128W HPC2Q01448 625 aa6.78□□□□□ -1.32
VCX1YDL128W UBP2Q01476 1272 aa6.78□□□□□ -1.32
VCX1YDL128W ATG20Q07528 640 aa6.78□□□□□ -1.32
VCX1YDL128W LTE1P07866 1435 aa6.77□□□□□ -1.33
VCX1YDL128W PKC1P24583 1151 aa6.77□□□□□ -1.33
VCX1YDL128W SLN1P39928 1220 aaPredicted RBP6.77□□□□□ -1.33
VCX1YDL128W DMA2P53924 522 aa6.77□□□□□ -1.33
VCX1YDL128W AIM44Q99299 758 aa6.77□□□□□ -1.33
VCX1YDL128W PCT1P13259 424 aa6.76□□□□□ -1.33
VCX1YDL128W YDJ1P25491 409 aaKnown RBP6.76□□□□□ -1.33
VCX1YDL128W SCT1P32784 759 aa6.76□□□□□ -1.33
VCX1YDL128W CSE4P36012 229 aa6.76□□□□□ -1.33
VCX1YDL128W NUP157P40064 1391 aaKnown RBP6.76□□□□□ -1.33
VCX1YDL128W EDE1P34216 1381 aa6.75□□□□□ -1.33
VCX1YDL128W DJP1P40564 432 aa6.75□□□□□ -1.33
VCX1YDL128W EMP47P43555 445 aa6.75□□□□□ -1.33
VCX1YDL128W FRA1Q07825 749 aa6.75□□□□□ -1.33
VCX1YDL128W VPS24P36095 224 aaKnown RBP6.74□□□□□ -1.33
VCX1YDL128W TAF5P38129 798 aa6.74□□□□□ -1.33
VCX1YDL128W YDL144CQ07589 356 aa6.74□□□□□ -1.33
VCX1YDL128W MCM16Q12262 181 aa6.74□□□□□ -1.33
VCX1YDL128W RAV1P47104 1357 aa6.73□□□□□ -1.33
VCX1YDL128W STE6P12866 1290 aa6.73□□□□□ -1.33
VCX1YDL128W KIP3P53086 805 aaKnown RBP6.73□□□□□ -1.33
VCX1YDL128W ISU1Q03020 165 aa6.73□□□□□ -1.33
VCX1YDL128W RTC1Q08281 1341 aa6.73□□□□□ -1.33
VCX1YDL128W IOC4Q04213 475 aa6.72□□□□□ -1.33
VCX1YDL128W MET5P47169 1442 aa6.71□□□□□ -1.34
VCX1YDL128W YSP2Q06681 1438 aa6.71□□□□□ -1.34
VCX1YDL128W SUI2P20459 304 aaKnown RBP6.71□□□□□ -1.34
VCX1YDL128W MSP1P28737 362 aa6.71□□□□□ -1.34
VCX1YDL128W OSH7P38755 437 aa6.71□□□□□ -1.34
VCX1YDL128W YGR035CP53222 116 aa6.71□□□□□ -1.34
VCX1YDL128W ISR1Q06098 443 aaKnown RBP6.71□□□□□ -1.34
VCX1YDL128W NOT3P06102 836 aaKnown RBP6.7□□□□□ -1.34
VCX1YDL128W SPT5P27692 1063 aaKnown RBP6.7□□□□□ -1.34
VCX1YDL128W BIO2P32451 375 aa6.7□□□□□ -1.34
VCX1YDL128W ESL2P36168 1195 aa6.7□□□□□ -1.34
VCX1YDL128W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
VCX1YDL128W HAP1P0CE41 1502 aa6.7□□□□□ -1.34
VCX1YDL128W TRM3Q07527 1436 aa6.69□□□□□ -1.34
VCX1YDL128W NUP192P47054 1683 aa6.69□□□□□ -1.34
VCX1YDL128W DLD3P39976 496 aaKnown RBP6.69□□□□□ -1.34
VCX1YDL128W ROG3P43602 733 aa6.69□□□□□ -1.34
VCX1YDL128W YNL108CP53929 270 aa6.69□□□□□ -1.34
VCX1YDL128W CTR9P89105 1077 aa6.69□□□□□ -1.34
VCX1YDL128W HPF1Q05164 967 aa6.69□□□□□ -1.34
VCX1YDL128W NOP58Q12499 511 aaKnown RBP6.69□□□□□ -1.34
VCX1YDL128W RAD2P07276 1031 aa6.68□□□□□ -1.34
VCX1YDL128W ARL1P38116 183 aaKnown RBP6.68□□□□□ -1.34
VCX1YDL128W DRS2P39524 1355 aa6.68□□□□□ -1.34
VCX1YDL128W IML1P47170 1584 aa6.67□□□□□ -1.34
VCX1YDL128W URN1Q06525 465 aaKnown RBP6.67□□□□□ -1.34
VCX1YDL128W LSP1Q12230 341 aaKnown RBP6.67□□□□□ -1.34
VCX1YDL128W DAT1P13483 248 aaKnown RBP6.66□□□□□ -1.34
VCX1YDL128W TY1A-MR1Q04215 440 aa6.66□□□□□ -1.34
VCX1YDL128W VMR1P38735 1592 aa6.65□□□□□ -1.34
VCX1YDL128W TRK2P28584 889 aa6.65□□□□□ -1.34
VCX1YDL128W YPP1P46951 817 aa6.65□□□□□ -1.34
VCX1YDL128W YJL007CP47080 104 aa6.65□□□□□ -1.34
VCX1YDL128W MPP10P47083 593 aaKnown RBP6.65□□□□□ -1.34
VCX1YDL128W MRX12P47084 519 aa6.65□□□□□ -1.34
VCX1YDL128W YGR130CP53278 816 aa6.65□□□□□ -1.34
VCX1YDL128W PDR11P40550 1411 aa6.65□□□□□ -1.35
VCX1YDL128W DNF3Q12674 1656 aa6.65□□□□□ -1.35
VCX1YDL128W RPP2BP02400 110 aaKnown RBP6.64□□□□□ -1.35
VCX1YDL128W KNS1P32350 737 aaPredicted RBP6.64□□□□□ -1.35
VCX1YDL128W UTR2P32623 467 aa6.64□□□□□ -1.35
VCX1YDL128W MET10P39692 1035 aa6.64□□□□□ -1.35
VCX1YDL128W BUD27P43573 796 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
VCX1YDL128W WTM2Q12206 467 aa6.64□□□□□ -1.35
VCX1YDL128W SEC7P11075 2009 aaKnown RBP6.64□□□□□ -1.35
VCX1YDL128W ENO2P00925 437 aaKnown RBP6.63□□□□□ -1.35
VCX1YDL128W SOH1P38633 127 aa6.63□□□□□ -1.35
VCX1YDL128W HAL5P38970 855 aaKnown RBP6.63□□□□□ -1.35
VCX1YDL128W APL6P46682 809 aa6.63□□□□□ -1.35
VCX1YDL128W CDC19P00549 500 aaKnown RBP6.62□□□□□ -1.35
VCX1YDL128W SPE2P21182 396 aa6.62□□□□□ -1.35
VCX1YDL128W NAM8Q00539 523 aaKnown RBP6.62□□□□□ -1.35
VCX1YDL128W RLF2Q12495 606 aa6.62□□□□□ -1.35
VCX1YDL128W NUP188P52593 1655 aaKnown RBP6.61□□□□□ -1.35
VCX1YDL128W BNR1P40450 1375 aa6.61□□□□□ -1.35
VCX1YDL128W CCP1P00431 361 aa6.61□□□□□ -1.35
VCX1YDL128W NAP1P25293 417 aaKnown RBP6.61□□□□□ -1.35
VCX1YDL128W UTP7P40055 554 aaKnown RBP6.61□□□□□ -1.35
VCX1YDL128W SUP45P12385 437 aaKnown RBP6.6□□□□□ -1.35
VCX1YDL128W DAL5P15365 543 aa6.6□□□□□ -1.35
VCX1YDL128W YEF3P16521 1044 aaKnown RBP6.6□□□□□ -1.35
VCX1YDL128W YIL092WP40497 633 aa6.6□□□□□ -1.35
VCX1YDL128W POL32P47110 350 aa6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms