RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W DLD3P39976 496 aaKnown RBP2.57□□□□□ -2
TRM3YDL112W RRD1P40454 393 aaKnown RBP2.57□□□□□ -2
TRM3YDL112W RIM21P48565 533 aa2.57□□□□□ -2
TRM3YDL112W BDS1Q08347 646 aa2.57□□□□□ -2
TRM3YDL112W GAR1P28007 205 aaKnown RBP2.57□□□□□ -2
TRM3YDL112W GEF1P37020 779 aa2.57□□□□□ -2
TRM3YDL112W RSC30P38781 883 aa2.57□□□□□ -2
TRM3YDL112W YML020WQ03722 664 aa2.56□□□□□ -2
TRM3YDL112W YML082WQ04533 649 aaKnown RBP2.56□□□□□ -2
TRM3YDL112W HDA3Q06623 655 aa2.56□□□□□ -2
TRM3YDL112W BUD21Q08492 214 aaPredicted RBP2.56□□□□□ -2
TRM3YDL112W ASH1P34233 588 aa2.56□□□□□ -2
TRM3YDL112W NTH2P35172 780 aa2.56□□□□□ -2
TRM3YDL112W HAL5P38970 855 aaKnown RBP2.56□□□□□ -2
TRM3YDL112W AIM9P40053 627 aaKnown RBP2.56□□□□□ -2
TRM3YDL112W ATG3P40344 310 aa2.56□□□□□ -2
TRM3YDL112W SUT1P53032 299 aaKnown RBP2.56□□□□□ -2
TRM3YDL112W IKI3Q06706 1349 aaKnown RBP2.56□□□□□ -2
TRM3YDL112W GLO3P38682 493 aaKnown RBP2.56□□□□□ -2
TRM3YDL112W PDR11P40550 1411 aa2.56□□□□□ -2
TRM3YDL112W ACS2P52910 683 aaKnown RBP2.56□□□□□ -2
TRM3YDL112W SAS4Q04003 481 aa2.56□□□□□ -2
TRM3YDL112W RAV1P47104 1357 aa2.55□□□□□ -2
TRM3YDL112W TYS1P36421 394 aaKnown RBP2.55□□□□□ -2
TRM3YDL112W GAL2P13181 574 aa2.55□□□□□ -2
TRM3YDL112W VAN1P23642 535 aa2.55□□□□□ -2
TRM3YDL112W SPT5P27692 1063 aaKnown RBP2.55□□□□□ -2
TRM3YDL112W CDC3P32457 520 aaKnown RBP2.55□□□□□ -2
TRM3YDL112W YBL113CQ7M4S9 792 aa2.54□□□□□ -2
TRM3YDL112W AMS1P22855 1083 aa2.54□□□□□ -2
TRM3YDL112W RGA1P39083 1007 aa2.54□□□□□ -2
TRM3YDL112W YMR074CQ04773 145 aa2.54□□□□□ -2
TRM3YDL112W TY4B-HP0C2J7 1802 aa2.53□□□□□ -2
TRM3YDL112W TY4B-JP47024 1803 aa2.53□□□□□ -2
TRM3YDL112W RDS2P19541 446 aaKnown RBP2.53□□□□□ -2
TRM3YDL112W SDH2P21801 266 aa2.53□□□□□ -2
TRM3YDL112W VAC17P25591 423 aa2.53□□□□□ -2
TRM3YDL112W URB1P34241 1764 aaKnown RBP2.53□□□□□ -2
TRM3YDL112W FUR4P05316 633 aaKnown RBP2.53□□□□□ -2
TRM3YDL112W RPS6AP0CX37 236 aaKnown RBP2.53□□□□□ -2
TRM3YDL112W RPS6BP0CX38 236 aaPredicted RBP2.53□□□□□ -2
TRM3YDL112W CWH41P53008 833 aa2.53□□□□□ -2
TRM3YDL112W YNR029CP53729 429 aaKnown RBP2.53□□□□□ -2
TRM3YDL112W MRX10Q05648 414 aa2.53□□□□□ -2
TRM3YDL112W CYT1P07143 309 aa2.52□□□□□ -2.01
TRM3YDL112W FRA1Q07825 749 aa2.52□□□□□ -2.01
TRM3YDL112W FKS3Q04952 1785 aa2.52□□□□□ -2.01
TRM3YDL112W ISC10P32645 267 aa2.52□□□□□ -2.01
TRM3YDL112W PEP7P32609 515 aa2.51□□□□□ -2.01
TRM3YDL112W PNP1Q05788 311 aa2.51□□□□□ -2.01
TRM3YDL112W RTC1Q08281 1341 aa2.51□□□□□ -2.01
TRM3YDL112W MET32Q12041 191 aa2.51□□□□□ -2.01
TRM3YDL112W XDJ1P39102 459 aa2.51□□□□□ -2.01
TRM3YDL112W NAF1P53919 492 aaKnown RBP2.51□□□□□ -2.01
TRM3YDL112W YRF1-3P0CX14 1859 aa2.51□□□□□ -2.01
TRM3YDL112W YRF1-7P0CX15 1859 aa2.51□□□□□ -2.01
TRM3YDL112W YTA6P40328 754 aa2.51□□□□□ -2.01
TRM3YDL112W MTO1P53070 669 aa2.51□□□□□ -2.01
TRM3YDL112W YRF1-6P53819 1859 aa2.51□□□□□ -2.01
TRM3YDL112W WTM2Q12206 467 aa2.51□□□□□ -2.01
TRM3YDL112W SWI5P08153 709 aa2.5□□□□□ -2.01
TRM3YDL112W TY3B-IQ7LHG5 1498 aaKnown RBP2.5□□□□□ -2.01
TRM3YDL112W AHP1P38013 176 aaKnown RBP2.5□□□□□ -2.01
TRM3YDL112W TSC13Q99190 310 aa2.5□□□□□ -2.01
TRM3YDL112W Q0182Q9ZZW1 134 aa2.5□□□□□ -2.01
TRM3YDL112W YJR115WP47152 169 aa2.5□□□□□ -2.01
TRM3YDL112W ROM1P53046 1155 aa2.5□□□□□ -2.01
TRM3YDL112W TRS33Q99394 268 aa2.5□□□□□ -2.01
TRM3YDL112W MRX12P47084 519 aa2.49□□□□□ -2.01
TRM3YDL112W KRE5P22023 1365 aa2.49□□□□□ -2.01
TRM3YDL112W HAP4P14064 554 aa2.49□□□□□ -2.01
TRM3YDL112W TPS3P38426 1054 aaKnown RBP2.49□□□□□ -2.01
TRM3YDL112W PHO87P25360 923 aa2.49□□□□□ -2.01
TRM3YDL112W SLD2P34252 453 aa2.49□□□□□ -2.01
TRM3YDL112W ERP5P38819 212 aa2.49□□□□□ -2.01
TRM3YDL112W YJL181WP46987 611 aa2.49□□□□□ -2.01
TRM3YDL112W RPB10P22139 70 aa2.49□□□□□ -2.01
TRM3YDL112W FBP26P32604 452 aa2.49□□□□□ -2.01
TRM3YDL112W ALD4P46367 519 aaKnown RBP2.49□□□□□ -2.01
TRM3YDL112W SNF2P22082 1703 aa2.48□□□□□ -2.01
TRM3YDL112W YFL034WP43564 1073 aa2.48□□□□□ -2.01
TRM3YDL112W YPR084WQ06821 456 aa2.48□□□□□ -2.01
TRM3YDL112W SSM4P40318 1319 aa2.48□□□□□ -2.01
TRM3YDL112W RPP2BP02400 110 aaKnown RBP2.48□□□□□ -2.01
TRM3YDL112W ARG82P07250 355 aa2.48□□□□□ -2.01
TRM3YDL112W MOD5P07884 428 aa2.48□□□□□ -2.01
TRM3YDL112W TRK1P12685 1235 aa2.48□□□□□ -2.01
TRM3YDL112W PTK2P47116 818 aaKnown RBP2.48□□□□□ -2.01
TRM3YDL112W ISU1Q03020 165 aa2.48□□□□□ -2.01
TRM3YDL112W ADE6P38972 1358 aaKnown RBP2.48□□□□□ -2.01
TRM3YDL112W RIA1P53893 1110 aa2.48□□□□□ -2.01
TRM3YDL112W ROM2P51862 1356 aaKnown RBP2.47□□□□□ -2.01
TRM3YDL112W HED1Q03937 162 aa2.47□□□□□ -2.01
TRM3YDL112W JIP5Q06214 492 aaPredicted RBP2.47□□□□□ -2.01
TRM3YDL112W IMH1Q06704 911 aaKnown RBP2.47□□□□□ -2.01
TRM3YDL112W ECM2P38241 364 aaKnown RBP2.47□□□□□ -2.01
TRM3YDL112W PSK1P31374 1356 aa2.47□□□□□ -2.01
TRM3YDL112W YHL050CP38721 697 aa2.47□□□□□ -2.01
TRM3YDL112W YHR219WP38900 624 aa2.47□□□□□ -2.01
TRM3YDL112W GAS4Q08271 471 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms