RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W NCL1P38205 684 aaKnown RBP5.3□□□□□ -1.56
TSR1YDL060W CAB1Q04430 367 aa5.3□□□□□ -1.56
TSR1YDL060W MRPL33P20084 86 aa5.29□□□□□ -1.56
TSR1YDL060W LDH1P38139 375 aa5.29□□□□□ -1.56
TSR1YDL060W DYS1P38791 387 aa5.29□□□□□ -1.56
TSR1YDL060W AI1P03875 834 aa5.29□□□□□ -1.56
TSR1YDL060W FUR4P05316 633 aaKnown RBP5.29□□□□□ -1.56
TSR1YDL060W YBR287WP38355 427 aa5.28□□□□□ -1.56
TSR1YDL060W HEH2Q03281 663 aa5.28□□□□□ -1.56
TSR1YDL060W VMA3P25515 160 aa5.28□□□□□ -1.56
TSR1YDL060W NOP7P53261 605 aaKnown RBP5.27□□□□□ -1.57
TSR1YDL060W CUS1Q02554 436 aaPredicted RBP5.27□□□□□ -1.57
TSR1YDL060W THI72Q08579 599 aa5.27□□□□□ -1.57
TSR1YDL060W APM2P38700 605 aa5.26□□□□□ -1.57
TSR1YDL060W FIR1P40020 876 aa5.26□□□□□ -1.57
TSR1YDL060W SKP1P52286 194 aa5.26□□□□□ -1.57
TSR1YDL060W NSG2P53898 299 aa5.25□□□□□ -1.57
TSR1YDL060W TY1A-DR2Q03964 440 aaKnown RBP5.25□□□□□ -1.57
TSR1YDL060W MET1P36150 593 aa5.24□□□□□ -1.57
TSR1YDL060W YNR014WP53719 212 aa5.24□□□□□ -1.57
TSR1YDL060W GPM1P00950 247 aaKnown RBP5.24□□□□□ -1.57
TSR1YDL060W ICP55P40051 511 aa5.24□□□□□ -1.57
TSR1YDL060W RPC31P17890 251 aa5.23□□□□□ -1.57
TSR1YDL060W GIP1P38229 639 aa5.23□□□□□ -1.57
TSR1YDL060W KAR5Q04746 504 aa5.23□□□□□ -1.57
TSR1YDL060W PUS1Q12211 544 aaKnown RBP5.23□□□□□ -1.57
TSR1YDL060W PHM7Q12252 991 aa5.23□□□□□ -1.57
TSR1YDL060W ISW1P38144 1129 aa5.23□□□□□ -1.57
TSR1YDL060W YOR296WQ08748 1289 aa5.23□□□□□ -1.57
TSR1YDL060W KNS1P32350 737 aaPredicted RBP5.22□□□□□ -1.57
TSR1YDL060W TPS3P38426 1054 aaKnown RBP5.22□□□□□ -1.57
TSR1YDL060W SUT1P53032 299 aaKnown RBP5.22□□□□□ -1.57
TSR1YDL060W CDC3P32457 520 aaKnown RBP5.22□□□□□ -1.57
TSR1YDL060W MDJ1P35191 511 aa5.22□□□□□ -1.57
TSR1YDL060W HXT8P40886 569 aa5.22□□□□□ -1.57
TSR1YDL060W PDC5P16467 563 aaKnown RBP5.21□□□□□ -1.57
TSR1YDL060W YNR040WP53736 256 aa5.21□□□□□ -1.57
TSR1YDL060W MSC7P38694 644 aa5.21□□□□□ -1.58
TSR1YDL060W SNU71P53207 620 aaKnown RBP5.21□□□□□ -1.58
TSR1YDL060W SLD2P34252 453 aa5.2□□□□□ -1.58
TSR1YDL060W BOI2P39969 1040 aa5.2□□□□□ -1.58
TSR1YDL060W LSO1Q3E827 93 aa5.2□□□□□ -1.58
TSR1YDL060W RGA2Q06407 1009 aa5.2□□□□□ -1.58
TSR1YDL060W RSC2Q06488 889 aa5.2□□□□□ -1.58
TSR1YDL060W MSN1P22148 382 aa5.19□□□□□ -1.58
TSR1YDL060W NAB2P32505 525 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
TSR1YDL060W BSD2P38356 321 aa5.19□□□□□ -1.58
TSR1YDL060W GLO3P38682 493 aaKnown RBP5.19□□□□□ -1.58
TSR1YDL060W SMC1P32908 1225 aa5.18□□□□□ -1.58
TSR1YDL060W PAM1P37304 830 aaKnown RBP5.18□□□□□ -1.58
TSR1YDL060W BOL3P39724 118 aa5.18□□□□□ -1.58
TSR1YDL060W PRK1P40494 810 aa5.18□□□□□ -1.58
TSR1YDL060W SBE2P42223 864 aaKnown RBP5.18□□□□□ -1.58
TSR1YDL060W ITC1P53125 1264 aa5.18□□□□□ -1.58
TSR1YDL060W MTC5Q03897 1148 aa5.18□□□□□ -1.58
TSR1YDL060W ALG14P38242 237 aa5.18□□□□□ -1.58
TSR1YDL060W MET10P39692 1035 aa5.18□□□□□ -1.58
TSR1YDL060W AIM46P38885 310 aa5.17□□□□□ -1.58
TSR1YDL060W BOI1P38041 980 aaKnown RBP5.16□□□□□ -1.58
TSR1YDL060W RAD55P38953 406 aa5.16□□□□□ -1.58
TSR1YDL060W TDA6Q06466 467 aa5.16□□□□□ -1.58
TSR1YDL060W QDR1P40475 563 aa5.16□□□□□ -1.58
TSR1YDL060W YMR187CQ03236 431 aa5.16□□□□□ -1.58
TSR1YDL060W APC11Q12157 165 aa5.16□□□□□ -1.58
TSR1YDL060W NHA1Q99271 985 aa5.16□□□□□ -1.58
TSR1YDL060W YER156CP40093 338 aaKnown RBP5.15□□□□□ -1.58
TSR1YDL060W YPR053CQ6Q5F3 151 aa5.15□□□□□ -1.58
TSR1YDL060W IDI1P15496 288 aa5.15□□□□□ -1.59
TSR1YDL060W YIL165CP40446 119 aa5.15□□□□□ -1.59
TSR1YDL060W YFL066CP43538 392 aa5.15□□□□□ -1.59
TSR1YDL060W YJL181WP46987 611 aa5.15□□□□□ -1.59
TSR1YDL060W RPB10P22139 70 aa5.14□□□□□ -1.59
TSR1YDL060W PGM2P37012 569 aaKnown RBP5.14□□□□□ -1.59
TSR1YDL060W HAT1Q12341 374 aa5.14□□□□□ -1.59
TSR1YDL060W SSF1P38789 453 aaPredicted RBP5.14□□□□□ -1.59
TSR1YDL060W NTA1P40354 457 aa5.14□□□□□ -1.59
TSR1YDL060W SEN54Q02825 467 aaPredicted RBP5.14□□□□□ -1.59
TSR1YDL060W PPT1P53043 513 aa5.13□□□□□ -1.59
TSR1YDL060W ATG1P53104 897 aa5.13□□□□□ -1.59
TSR1YDL060W UFD2P54860 961 aa5.13□□□□□ -1.59
TSR1YDL060W IRS4P36115 615 aaKnown RBP5.13□□□□□ -1.59
TSR1YDL060W MCX1P38323 520 aaPredicted RBP5.13□□□□□ -1.59
TSR1YDL060W ACF4P47129 309 aa5.13□□□□□ -1.59
TSR1YDL060W HEM3P28789 327 aa5.12□□□□□ -1.59
TSR1YDL060W GRS1P38088 690 aaKnown RBP5.12□□□□□ -1.59
TSR1YDL060W RGD2P43556 714 aa5.12□□□□□ -1.59
TSR1YDL060W EMG1Q06287 252 aaKnown RBP5.12□□□□□ -1.59
TSR1YDL060W ECM2P38241 364 aaKnown RBP5.11□□□□□ -1.59
TSR1YDL060W PSY2P40164 858 aa5.11□□□□□ -1.59
TSR1YDL060W NOP2P40991 618 aaKnown RBP5.11□□□□□ -1.59
TSR1YDL060W GIS4Q04233 774 aa5.11□□□□□ -1.59
TSR1YDL060W YBL113CQ7M4S9 792 aa5.11□□□□□ -1.59
TSR1YDL060W NAR1P23503 491 aaKnown RBP5.11□□□□□ -1.59
TSR1YDL060W TAT1P38085 619 aa5.1□□□□□ -1.59
TSR1YDL060W TIF6Q12522 245 aaKnown RBP5.1□□□□□ -1.59
TSR1YDL060W LSB3P43603 459 aaKnown RBP5.09□□□□□ -1.59
TSR1YDL060W SLP1Q12232 587 aa5.09□□□□□ -1.59
TSR1YDL060W ERP5P38819 212 aa5.09□□□□□ -1.59
TSR1YDL060W SOK2P53438 785 aaPredicted RBP5.09□□□□□ -1.59
TSR1YDL060W YTA7P40340 1379 aa5.09□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms