RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C ICP55P40051 511 aa8.95□□□□□ -0.98
RRP43YCR035C ERO1Q03103 563 aa8.95□□□□□ -0.98
RRP43YCR035C SRC1Q03707 834 aa8.95□□□□□ -0.98
RRP43YCR035C THI3Q07471 609 aa8.95□□□□□ -0.98
RRP43YCR035C MGM1P32266 881 aa8.94□□□□□ -0.98
RRP43YCR035C YGL242CP53066 181 aa8.94□□□□□ -0.98
RRP43YCR035C NOT3P06102 836 aaKnown RBP8.93□□□□□ -0.98
RRP43YCR035C CDC16P09798 840 aa8.93□□□□□ -0.98
RRP43YCR035C KIN4Q01919 800 aa8.93□□□□□ -0.98
RRP43YCR035C RMD1Q03441 430 aa8.93□□□□□ -0.98
RRP43YCR035C ADR1P07248 1323 aa8.92□□□□□ -0.98
RRP43YCR035C PDR18P53756 1333 aa8.92□□□□□ -0.98
RRP43YCR035C KTR3P38130 404 aaPredicted RBP8.92□□□□□ -0.98
RRP43YCR035C ECM21P38167 1117 aaKnown RBP8.92□□□□□ -0.98
RRP43YCR035C MLC1P53141 149 aa8.92□□□□□ -0.98
RRP43YCR035C YNL193WP53870 558 aa8.92□□□□□ -0.98
RRP43YCR035C ALO1P54783 526 aaKnown RBP8.92□□□□□ -0.98
RRP43YCR035C YPR148CQ06523 435 aa8.92□□□□□ -0.98
RRP43YCR035C RPT4P53549 437 aaKnown RBP8.91□□□□□ -0.98
RRP43YCR035C RPN7Q06103 429 aaKnown RBP8.91□□□□□ -0.98
RRP43YCR035C RRI2Q12348 645 aa8.91□□□□□ -0.98
RRP43YCR035C SIS1P25294 352 aaKnown RBP8.9□□□□□ -0.98
RRP43YCR035C KRE2P27809 442 aa8.9□□□□□ -0.98
RRP43YCR035C SPL2P38839 148 aa8.9□□□□□ -0.98
RRP43YCR035C YER156CP40093 338 aaKnown RBP8.9□□□□□ -0.98
RRP43YCR035C RAD50P12753 1312 aa8.89□□□□□ -0.99
RRP43YCR035C VAS1P07806 1104 aaKnown RBP8.89□□□□□ -0.99
RRP43YCR035C RET1P22276 1149 aaKnown RBP8.89□□□□□ -0.99
RRP43YCR035C ICL1P28240 557 aaPredicted RBP8.89□□□□□ -0.99
RRP43YCR035C EDS1P38073 919 aa8.89□□□□□ -0.99
RRP43YCR035C NUG1P40010 520 aaKnown RBP8.89□□□□□ -0.99
RRP43YCR035C PIB1Q06651 286 aa8.89□□□□□ -0.99
RRP43YCR035C POM152P39685 1337 aa8.88□□□□□ -0.99
RRP43YCR035C VMA1P17255 1071 aaKnown RBP8.88□□□□□ -0.99
RRP43YCR035C YKU70P32807 602 aa8.88□□□□□ -0.99
RRP43YCR035C BRE1Q07457 700 aaKnown RBP8.88□□□□□ -0.99
RRP43YCR035C GRX6Q12438 231 aa8.88□□□□□ -0.99
RRP43YCR035C PMD1P32634 1753 aa8.88□□□□□ -0.99
RRP43YCR035C TOP1P04786 769 aa8.87□□□□□ -0.99
RRP43YCR035C HAL5P38970 855 aaKnown RBP8.87□□□□□ -0.99
RRP43YCR035C PIB2P53191 635 aa8.87□□□□□ -0.99
RRP43YCR035C IRC4Q03036 179 aa8.87□□□□□ -0.99
RRP43YCR035C LCB1P25045 558 aaKnown RBP8.86□□□□□ -0.99
RRP43YCR035C MRPS35P53292 345 aa8.86□□□□□ -0.99
RRP43YCR035C PIF1P07271 859 aa8.85□□□□□ -0.99
RRP43YCR035C BRN1P38170 754 aa8.85□□□□□ -0.99
RRP43YCR035C PBY1P38254 753 aa8.85□□□□□ -0.99
RRP43YCR035C GLO3P38682 493 aaKnown RBP8.85□□□□□ -0.99
RRP43YCR035C UBX2Q04228 584 aa8.85□□□□□ -0.99
RRP43YCR035C KTR1P27810 393 aaKnown RBP8.84□□□□□ -0.99
RRP43YCR035C YIR042CP40586 236 aa8.84□□□□□ -0.99
RRP43YCR035C SET4P42948 560 aa8.84□□□□□ -0.99
RRP43YCR035C GSM1P42950 618 aa8.84□□□□□ -0.99
RRP43YCR035C GCR2Q01722 534 aa8.84□□□□□ -0.99
RRP43YCR035C INM2Q05533 292 aa8.84□□□□□ -0.99
RRP43YCR035C FPR4Q06205 392 aaPredicted RBP8.84□□□□□ -0.99
RRP43YCR035C DLD1P32891 587 aa8.83□□□□□ -1
RRP43YCR035C RPT3P33298 428 aaKnown RBP8.83□□□□□ -1
RRP43YCR035C DPL1Q05567 589 aa8.83□□□□□ -1
RRP43YCR035C TOS4Q06266 489 aa8.83□□□□□ -1
RRP43YCR035C SAM3Q08986 587 aa8.83□□□□□ -1
RRP43YCR035C RIM20Q12033 661 aa8.83□□□□□ -1
RRP43YCR035C PTC3P34221 468 aaKnown RBP8.82□□□□□ -1
RRP43YCR035C STM1P39015 273 aaKnown RBP8.82□□□□□ -1
RRP43YCR035C JJJ2P46997 583 aa8.82□□□□□ -1
RRP43YCR035C GAS5Q08193 484 aa8.82□□□□□ -1
RRP43YCR035C SHC1P39000 512 aa8.81□□□□□ -1
RRP43YCR035C HXT13P39924 564 aa8.81□□□□□ -1
RRP43YCR035C YFH7P43591 353 aa8.81□□□□□ -1
RRP43YCR035C HXT17P53631 564 aa8.81□□□□□ -1
RRP43YCR035C SQS1P53866 767 aaKnown RBP8.81□□□□□ -1
RRP43YCR035C PTK1P36002 662 aaPredicted RBP8.8□□□□□ -1
RRP43YCR035C AAP1P37898 856 aaKnown RBP8.8□□□□□ -1
RRP43YCR035C OSH3P38713 996 aaKnown RBP8.8□□□□□ -1
RRP43YCR035C YMR147WP40218 223 aaKnown RBP8.8□□□□□ -1
RRP43YCR035C PRP42Q03776 544 aaKnown RBP8.8□□□□□ -1
RRP43YCR035C PSF3Q12146 194 aa8.8□□□□□ -1
RRP43YCR035C SSA1P10591 642 aaKnown RBP8.79□□□□□ -1
RRP43YCR035C GRX7P38068 203 aa8.79□□□□□ -1
RRP43YCR035C VPS70P47161 811 aa8.79□□□□□ -1
RRP43YCR035C WRS1Q12109 432 aaKnown RBP8.79□□□□□ -1
RRP43YCR035C RRG1Q12167 365 aaPredicted RBP8.79□□□□□ -1
RRP43YCR035C ATG20Q07528 640 aa8.78□□□□□ -1
RRP43YCR035C CYB2P00175 591 aa8.77□□□□□ -1.01
RRP43YCR035C RPS9BP05755 195 aaKnown RBP8.77□□□□□ -1.01
RRP43YCR035C OPI1P21957 404 aa8.77□□□□□ -1.01
RRP43YCR035C AFG2P32794 780 aa8.77□□□□□ -1.01
RRP43YCR035C MDL2P33311 773 aa8.77□□□□□ -1.01
RRP43YCR035C BOI1P38041 980 aaKnown RBP8.77□□□□□ -1.01
RRP43YCR035C ENP2P48234 707 aaKnown RBP8.77□□□□□ -1.01
RRP43YCR035C ARG82P07250 355 aa8.76□□□□□ -1.01
RRP43YCR035C MSM1P22438 575 aa8.76□□□□□ -1.01
RRP43YCR035C YIR014WP40570 242 aa8.76□□□□□ -1.01
RRP43YCR035C IRC8P47046 822 aa8.76□□□□□ -1.01
RRP43YCR035C PKH3Q03306 898 aaPredicted RBP8.76□□□□□ -1.01
RRP43YCR035C TAH18Q12181 623 aa8.76□□□□□ -1.01
RRP43YCR035C FAS2P19097 1887 aaKnown RBP8.76□□□□□ -1.01
RRP43YCR035C RPS7AP26786 190 aaKnown RBP8.75□□□□□ -1.01
RRP43YCR035C SLI15P38283 698 aa8.75□□□□□ -1.01
RRP43YCR035C KRI1P42846 591 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 99.6 ms