RNA–Protein interactions for RNA: ENST00000642082.1

CASC19-277, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-277ENST00000642082 POLA1P09884 1462 aaPredicted RBP10.84□□□□□ -0.67
CASC19-277ENST00000642082 RAD54L2Q9Y4B4 1467 aa10.84□□□□□ -0.67
CASC19-277ENST00000642082 DAXXQ9UER7 740 aaPredicted RBP10.84□□□□□ -0.67
CASC19-277ENST00000642082 CUX1P39880 1505 aa10.83□□□□□ -0.67
CASC19-277ENST00000642082 AQRO60306 1485 aaKnown RBP eCLIP10.83□□□□□ -0.68
CASC19-277ENST00000642082 KIFC2Q96AC6 838 aa10.83□□□□□ -0.68
CASC19-277ENST00000642082 SOGA1O94964 1423 aa10.82□□□□□ -0.68
CASC19-277ENST00000642082 TTC24A2A3L6 582 aaPredicted RBP10.82□□□□□ -0.68
CASC19-277ENST00000642082 TDRD9Q8NDG6 1382 aaKnown RBP10.81□□□□□ -0.68
CASC19-277ENST00000642082 IRF7Q92985 503 aa10.81□□□□□ -0.68
CASC19-277ENST00000642082 EYA1Q99502 592 aa10.81□□□□□ -0.68
CASC19-277ENST00000642082 NXF1Q9UBU9 619 aaKnown RBP10.81□□□□□ -0.68
CASC19-277ENST00000642082 FGD5Q6ZNL6 1462 aa10.8□□□□□ -0.68
CASC19-277ENST00000642082 CD2BP2O95400 341 aaKnown RBP10.8□□□□□ -0.68
CASC19-277ENST00000642082 NR1I2O75469 434 aa10.79□□□□□ -0.68
CASC19-277ENST00000642082 KMT5BQ4FZB7 885 aa10.79□□□□□ -0.68
CASC19-277ENST00000642082 PADI6Q6TGC4 694 aa10.79□□□□□ -0.68
CASC19-277ENST00000642082 SMPD1P17405 629 aa10.79□□□□□ -0.68
CASC19-277ENST00000642082 TARBP1Q13395 1621 aaKnown RBP10.78□□□□□ -0.68
CASC19-277ENST00000642082 SPDYE16A6NNV3 312 aaPredicted RBP10.78□□□□□ -0.68
CASC19-277ENST00000642082 KCNMA1Q12791 1236 aa10.77□□□□□ -0.69
CASC19-277ENST00000642082 WRNQ14191 1432 aaPredicted RBP eCLIP10.76□□□□□ -0.69
CASC19-277ENST00000642082 EIF4G3O43432 1585 aaKnown RBP10.75□□□□□ -0.69
CASC19-277ENST00000642082 GRXCR2A6NFK2 248 aa10.74□□□□□ -0.69
CASC19-277ENST00000642082 GSK3AP49840 483 aa10.74□□□□□ -0.69
CASC19-277ENST00000642082 NPAS3Q8IXF0 933 aa10.74□□□□□ -0.69
CASC19-277ENST00000642082 CFHP08603 1231 aa10.73□□□□□ -0.69
CASC19-277ENST00000642082 SNIP1Q8TAD8 396 aaKnown RBP10.72□□□□□ -0.69
CASC19-277ENST00000642082 SYNJ1O43426 1573 aa10.71□□□□□ -0.7
CASC19-277ENST00000642082 SCUBE3Q8IX30 993 aa10.7□□□□□ -0.7
CASC19-277ENST00000642082 SPSB2Q99619 263 aa10.7□□□□□ -0.7
CASC19-277ENST00000642082 NPDC1Q9NQX5 325 aaPredicted RBP10.7□□□□□ -0.7
CASC19-277ENST00000642082 ERBB4Q15303 1308 aa10.7□□□□□ -0.7
CASC19-277ENST00000642082 H3BM21 787 aa10.69□□□□□ -0.7
CASC19-277ENST00000642082 OSBPP22059 807 aa10.69□□□□□ -0.7
CASC19-277ENST00000642082 VEGFBP49765 207 aa10.69□□□□□ -0.7
CASC19-277ENST00000642082 FCF1Q9Y324 198 aaKnown RBP10.69□□□□□ -0.7
CASC19-277ENST00000642082 CHMP7Q8WUX9 453 aaPredicted RBP10.68□□□□□ -0.7
CASC19-277ENST00000642082 GAPVD1Q14C86 1478 aa10.67□□□□□ -0.7
CASC19-277ENST00000642082 SNAPC4Q5SXM2 1469 aa10.67□□□□□ -0.7
CASC19-277ENST00000642082 ABCA10Q8WWZ4 1543 aa10.67□□□□□ -0.7
CASC19-277ENST00000642082 TOP2BQ02880 1626 aa10.67□□□□□ -0.7
CASC19-277ENST00000642082 J3QL48 77 aa10.67□□□□□ -0.7
CASC19-277ENST00000642082 DNAJB2P25686 324 aa10.67□□□□□ -0.7
CASC19-277ENST00000642082 XP32Q5T750 250 aa10.67□□□□□ -0.7
CASC19-277ENST00000642082 WNT7AO00755 349 aa10.66□□□□□ -0.7
CASC19-277ENST00000642082 GRIN2BQ13224 1484 aa10.66□□□□□ -0.7
CASC19-277ENST00000642082 HPS1Q92902 700 aa10.66□□□□□ -0.7
CASC19-277ENST00000642082 TMEM151AQ8N4L1 468 aa10.65□□□□□ -0.7
CASC19-277ENST00000642082 TMEM134Q9H6X4 195 aa10.65□□□□□ -0.7
CASC19-277ENST00000642082 BIVM-ERCC5R4GMW8 1640 aa10.64□□□□□ -0.71
CASC19-277ENST00000642082 KRTAP4-8Q9BYQ9 185 aa10.62□□□□□ -0.71
CASC19-277ENST00000642082 MAGI1Q96QZ7 1491 aaPredicted RBP10.62□□□□□ -0.71
CASC19-277ENST00000642082 WDR97A6NE52 1622 aa10.61□□□□□ -0.71
CASC19-277ENST00000642082 SLC10A3P09131 477 aa10.61□□□□□ -0.71
CASC19-277ENST00000642082 GDF11O95390 407 aa10.6□□□□□ -0.71
CASC19-277ENST00000642082 SYNJ2O15056 1496 aa10.59□□□□□ -0.71
CASC19-277ENST00000642082 ABCA5Q8WWZ7 1642 aa10.59□□□□□ -0.71
CASC19-277ENST00000642082 PUS10Q3MIT2 529 aaKnown RBP10.59□□□□□ -0.71
CASC19-277ENST00000642082 CHD1O14646 1710 aa10.59□□□□□ -0.71
CASC19-277ENST00000642082 RASSF7Q02833 373 aa10.58□□□□□ -0.72
CASC19-277ENST00000642082 MRGPRX2Q96LB1 330 aa10.58□□□□□ -0.72
CASC19-277ENST00000642082 ZBTB24O43167 697 aaPredicted RBP10.58□□□□□ -0.72
CASC19-277ENST00000642082 PRKCSHP14314 528 aaPredicted RBP10.58□□□□□ -0.72
CASC19-277ENST00000642082 CYB5RLQ6IPT4 315 aa10.56□□□□□ -0.72
CASC19-277ENST00000642082 PBRM1Q86U86 1689 aa10.55□□□□□ -0.72
CASC19-277ENST00000642082 ARHGEF11O15085 1522 aa10.55□□□□□ -0.72
CASC19-277ENST00000642082 RIMBP3CA6NJZ7 1639 aa10.54□□□□□ -0.72
CASC19-277ENST00000642082 RIMBP3BA6NNM3 1639 aa10.54□□□□□ -0.72
CASC19-277ENST00000642082 RIMBP3Q9UFD9 1639 aa10.54□□□□□ -0.72
CASC19-277ENST00000642082 FHAD1B1AJZ9 1412 aa10.54□□□□□ -0.72
CASC19-277ENST00000642082 IGF1RP08069 1367 aa10.54□□□□□ -0.72
CASC19-277ENST00000642082 RBM46Q8TBY0 533 aaKnown RBP10.53□□□□□ -0.72
CASC19-277ENST00000642082 KIF27Q86VH2 1401 aa10.53□□□□□ -0.72
CASC19-277ENST00000642082 GRIN2AQ12879 1464 aa10.53□□□□□ -0.72
CASC19-277ENST00000642082 FAM160A2Q8N612 972 aaPredicted RBP10.53□□□□□ -0.72
CASC19-277ENST00000642082 ERICH3Q5RHP9 1530 aa10.52□□□□□ -0.73
CASC19-277ENST00000642082 RCCD1A6NED2 376 aa10.52□□□□□ -0.73
CASC19-277ENST00000642082 TRIM46Q7Z4K8 759 aa10.52□□□□□ -0.73
CASC19-277ENST00000642082 THAP11Q96EK4 314 aa10.52□□□□□ -0.73
CASC19-277ENST00000642082 ADAMTS12P58397 1594 aa10.51□□□□□ -0.73
CASC19-277ENST00000642082 BCANQ96GW7 911 aa10.51□□□□□ -0.73
CASC19-277ENST00000642082 CLASP1Q7Z460 1538 aa10.51□□□□□ -0.73
CASC19-277ENST00000642082 ARXQ96QS3 562 aa10.5□□□□□ -0.73
CASC19-277ENST00000642082 BMP1P13497 986 aa10.49□□□□□ -0.73
CASC19-277ENST00000642082 TRIM32Q13049 653 aa10.49□□□□□ -0.73
CASC19-277ENST00000642082 ARIH1Q9Y4X5 557 aaPredicted RBP10.49□□□□□ -0.73
CASC19-277ENST00000642082 RUSC2Q8N2Y8 1516 aa10.49□□□□□ -0.73
CASC19-277ENST00000642082 PRDM9Q9NQV7 894 aa10.48□□□□□ -0.73
CASC19-277ENST00000642082 NUP160Q12769 1436 aa10.48□□□□□ -0.73
CASC19-277ENST00000642082 VSIG8P0DPA2 414 aa10.48□□□□□ -0.73
CASC19-277ENST00000642082 REPIN1Q9BWE0 567 aaKnown RBP10.48□□□□□ -0.73
CASC19-277ENST00000642082 ADGRG1Q9Y653 693 aa10.48□□□□□ -0.73
CASC19-277ENST00000642082 ARAP1Q96P48 1450 aa10.47□□□□□ -0.73
CASC19-277ENST00000642082 CEP170Q5SW79 1584 aa10.47□□□□□ -0.73
CASC19-277ENST00000642082 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.47□□□□□ -0.73
CASC19-277ENST00000642082 CARMIL1Q5VZK9 1371 aa10.47□□□□□ -0.73
CASC19-277ENST00000642082 RNF225M0QZC1 329 aaPredicted RBP10.45□□□□□ -0.74
CASC19-277ENST00000642082 FMNL1O95466 1100 aaPredicted RBP10.44□□□□□ -0.74
CASC19-277ENST00000642082 MORN1Q5T089 497 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms