RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 CDC42BPGQ6DT37 1551 aa15.11■□□□□ 0.01
PHGDH-222ENST00000641587 ATRNO75882 1429 aa15.1■□□□□ 0.01
PHGDH-222ENST00000641587 PXDNQ92626 1479 aa15.1■□□□□ 0.01
PHGDH-222ENST00000641587 XPCQ01831 940 aaPredicted RBP15.1■□□□□ 0.01
PHGDH-222ENST00000641587 FOXD1Q16676 465 aa15.1■□□□□ 0.01
PHGDH-222ENST00000641587 ATAD2Q6PL18 1390 aa15.1■□□□□ 0.01
PHGDH-222ENST00000641587 FNBP4Q8N3X1 1017 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-222ENST00000641587 TRPC5Q9UL62 973 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-222ENST00000641587 MARF1Q9Y4F3 1742 aaKnown RBP15.09■□□□□ 0.01
PHGDH-222ENST00000641587 NUTM2FA1L443 756 aa15.08■□□□□ 0
PHGDH-222ENST00000641587 ESCO1Q5FWF5 840 aa15.08■□□□□ 0
PHGDH-222ENST00000641587 SLC4A1APQ9BWU0 796 aaKnown RBP15.08■□□□□ 0
PHGDH-222ENST00000641587 RPGRIP1LQ68CZ1 1315 aa15.07■□□□□ 0
PHGDH-222ENST00000641587 ADGRF5Q8IZF2 1346 aa15.07■□□□□ 0
PHGDH-222ENST00000641587 BCL9LQ86UU0 1499 aa15.07■□□□□ 0
PHGDH-222ENST00000641587 FOXO3O43524 673 aa15.06■□□□□ 0
PHGDH-222ENST00000641587 NPHP3Q7Z494 1330 aa15.06■□□□□ 0
PHGDH-222ENST00000641587 PLEKHH1Q9ULM0 1364 aa15.06■□□□□ 0
PHGDH-222ENST00000641587 WAPLQ7Z5K2 1190 aa15.05■□□□□ -0
PHGDH-222ENST00000641587 STK26Q9P289 416 aa15.05■□□□□ -0
PHGDH-222ENST00000641587 IFT172Q9UG01 1749 aa15.05■□□□□ -0
PHGDH-222ENST00000641587 RGL3Q3MIN7 710 aa15.03■□□□□ -0
PHGDH-222ENST00000641587 KNDC1Q76NI1 1749 aa15.03■□□□□ -0
PHGDH-222ENST00000641587 FMN2Q9NZ56 1722 aa15.03■□□□□ -0
PHGDH-222ENST00000641587 TECPR2O15040 1411 aa15.02■□□□□ -0
PHGDH-222ENST00000641587 TMEM132EQ6IEE7 984 aa15.02■□□□□ -0
PHGDH-222ENST00000641587 GLI3P10071 1580 aa15.02□□□□□ -0.01
PHGDH-222ENST00000641587 SPATA31E1Q6ZUB1 1445 aa15.01□□□□□ -0.01
PHGDH-222ENST00000641587 LRPPRCP42704 1394 aaKnown RBP15.01□□□□□ -0.01
PHGDH-222ENST00000641587 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.01□□□□□ -0.01
PHGDH-222ENST00000641587 CCDC144AA2RUR9 1427 aa15□□□□□ -0.01
PHGDH-222ENST00000641587 GJD4Q96KN9 370 aaPredicted RBP15□□□□□ -0.01
PHGDH-222ENST00000641587 RGPD8O14715 1765 aaPredicted RBP15□□□□□ -0.01
PHGDH-222ENST00000641587 RALGAPBQ86X10 1494 aa14.99□□□□□ -0.01
PHGDH-222ENST00000641587 PIK3C2GO75747 1445 aa14.99□□□□□ -0.01
PHGDH-222ENST00000641587 USP32Q8NFA0 1604 aa14.99□□□□□ -0.01
PHGDH-222ENST00000641587 BRWD3Q6RI45 1802 aa14.99□□□□□ -0.01
PHGDH-222ENST00000641587 SLIT2O94813 1529 aa14.98□□□□□ -0.01
PHGDH-222ENST00000641587 KIF1AQ12756 1690 aa14.98□□□□□ -0.01
PHGDH-222ENST00000641587 ABCC11Q96J66 1382 aa14.98□□□□□ -0.01
PHGDH-222ENST00000641587 SPATA31A3Q5VYP0 1347 aa14.97□□□□□ -0.01
PHGDH-222ENST00000641587 PLEKHG5O94827 1062 aa14.97□□□□□ -0.01
PHGDH-222ENST00000641587 ZRANB1Q9UGI0 708 aa14.97□□□□□ -0.01
PHGDH-222ENST00000641587 YTHDC2Q9H6S0 1430 aaKnown RBP14.97□□□□□ -0.01
PHGDH-222ENST00000641587 ANKRD30BQ9BXX2 1392 aa14.96□□□□□ -0.02
PHGDH-222ENST00000641587 ABCA3Q99758 1704 aa14.95□□□□□ -0.02
PHGDH-222ENST00000641587 UNC5CLQ8IV45 518 aa14.95□□□□□ -0.02
PHGDH-222ENST00000641587 PLCH1Q4KWH8 1693 aa14.94□□□□□ -0.02
PHGDH-222ENST00000641587 KRT28Q7Z3Y7 464 aa14.94□□□□□ -0.02
PHGDH-222ENST00000641587 CABLES1Q8TDN4 633 aa14.94□□□□□ -0.02
PHGDH-222ENST00000641587 TNS3Q68CZ2 1445 aa14.93□□□□□ -0.02
PHGDH-222ENST00000641587 MPHOSPH9Q99550 1183 aa14.93□□□□□ -0.02
PHGDH-222ENST00000641587 SAFB2Q14151 953 aaKnown RBP eCLIP14.92□□□□□ -0.02
PHGDH-222ENST00000641587 DEFB132Q7Z7B7 95 aa14.92□□□□□ -0.02
PHGDH-222ENST00000641587 BLMP54132 1417 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-222ENST00000641587 CCDC125Q86Z20 511 aa14.91□□□□□ -0.02
PHGDH-222ENST00000641587 HAP1P54257 671 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-222ENST00000641587 CFAP70Q5T0N1 1121 aa14.9□□□□□ -0.02
PHGDH-222ENST00000641587 PHF8Q9UPP1 1060 aa14.9□□□□□ -0.02
PHGDH-222ENST00000641587 NRXN1Q9ULB1 1477 aa14.89□□□□□ -0.03
PHGDH-222ENST00000641587 NWD2Q9ULI1 1742 aa14.89□□□□□ -0.03
PHGDH-222ENST00000641587 LMOD2Q6P5Q4 547 aa14.89□□□□□ -0.03
PHGDH-222ENST00000641587 SEPT12Q8IYM1 358 aa14.89□□□□□ -0.03
PHGDH-222ENST00000641587 PRAM1Q96QH2 718 aa14.88□□□□□ -0.03
PHGDH-222ENST00000641587 NRAPQ86VF7 1730 aa14.87□□□□□ -0.03
PHGDH-222ENST00000641587 VPS72Q15906 364 aa14.87□□□□□ -0.03
PHGDH-222ENST00000641587 PMFBP1Q8TBY8 1022 aa14.87□□□□□ -0.03
PHGDH-222ENST00000641587 C14orf93Q9H972 538 aaKnown RBP14.87□□□□□ -0.03
PHGDH-222ENST00000641587 CCDC9Q9Y3X0 531 aaKnown RBP14.87□□□□□ -0.03
PHGDH-222ENST00000641587 TRPM3Q9HCF6 1732 aaPredicted RBP14.86□□□□□ -0.03
PHGDH-222ENST00000641587 SBNO1A3KN83 1393 aa14.85□□□□□ -0.03
PHGDH-222ENST00000641587 DHX57Q6P158 1386 aaKnown RBP14.85□□□□□ -0.03
PHGDH-222ENST00000641587 PSME1Q06323 249 aa14.85□□□□□ -0.03
PHGDH-222ENST00000641587 SIRT1Q96EB6 747 aa14.85□□□□□ -0.03
PHGDH-222ENST00000641587 FAM83GA6ND36 823 aa14.84□□□□□ -0.03
PHGDH-222ENST00000641587 ADGRB2O60241 1585 aa14.84□□□□□ -0.03
PHGDH-222ENST00000641587 ARHGEF10O15013 1369 aa14.84□□□□□ -0.03
PHGDH-222ENST00000641587 DLC1Q96QB1 1528 aa14.83□□□□□ -0.04
PHGDH-222ENST00000641587 A0A0G2JS52 829 aa14.83□□□□□ -0.04
PHGDH-222ENST00000641587 MYT1Q01538 1121 aa14.83□□□□□ -0.04
PHGDH-222ENST00000641587 SF3B2Q13435 895 aaKnown RBP14.83□□□□□ -0.04
PHGDH-222ENST00000641587 KRT27Q7Z3Y8 459 aa14.83□□□□□ -0.04
PHGDH-222ENST00000641587 HIRIP3Q9BW71 556 aaPredicted RBP14.83□□□□□ -0.04
PHGDH-222ENST00000641587 ALS2Q96Q42 1657 aa14.83□□□□□ -0.04
PHGDH-222ENST00000641587 ADGRB1O14514 1584 aa14.82□□□□□ -0.04
PHGDH-222ENST00000641587 ONECUT3O60422 494 aaPredicted RBP14.82□□□□□ -0.04
PHGDH-222ENST00000641587 ANKARQ7Z5J8 1434 aa14.82□□□□□ -0.04
PHGDH-222ENST00000641587 FAM98CQ17RN3 349 aaKnown RBP14.81□□□□□ -0.04
PHGDH-222ENST00000641587 POGKQ9P215 609 aa14.81□□□□□ -0.04
PHGDH-222ENST00000641587 PRR36Q9H6K5 1346 aa14.81□□□□□ -0.04
PHGDH-222ENST00000641587 LRP5O75197 1615 aa14.81□□□□□ -0.04
PHGDH-222ENST00000641587 CRYBG1Q9Y4K1 1723 aa14.8□□□□□ -0.04
PHGDH-222ENST00000641587 PSDA5PKW4 1024 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-222ENST00000641587 FAM182BQ5T319 152 aa14.8□□□□□ -0.04
PHGDH-222ENST00000641587 BTG4Q9NY30 223 aa14.8□□□□□ -0.04
PHGDH-222ENST00000641587 TRAK1Q9UPV9 953 aa14.8□□□□□ -0.04
PHGDH-222ENST00000641587 COL14A1Q05707 1796 aaKnown RBP14.79□□□□□ -0.04
PHGDH-222ENST00000641587 TRIM26Q12899 539 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-222ENST00000641587 MINK1Q8N4C8 1332 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-222ENST00000641587 TULP4Q9NRJ4 1543 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms