RNA–Protein interactions for RNA: ENST00000640104.1

SPIN3-235, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-235ENST00000640104 POLR3AO14802 1390 aaPredicted RBP17.59■□□□□ 0.41
SPIN3-235ENST00000640104 REREQ9P2R6 1566 aa17.59■□□□□ 0.41
SPIN3-235ENST00000640104 PUS7Q96PZ0 661 aaKnown RBP17.58■□□□□ 0.4
SPIN3-235ENST00000640104 STAG3Q9UJ98 1225 aa17.58■□□□□ 0.4
SPIN3-235ENST00000640104 CGNL1Q0VF96 1302 aa17.58■□□□□ 0.4
SPIN3-235ENST00000640104 AGLP35573 1532 aa17.57■□□□□ 0.4
SPIN3-235ENST00000640104 USP32Q8NFA0 1604 aa17.57■□□□□ 0.4
SPIN3-235ENST00000640104 FANCIQ9NVI1 1328 aa17.57■□□□□ 0.4
SPIN3-235ENST00000640104 ANKRD36BQ8N2N9 1353 aa17.57■□□□□ 0.4
SPIN3-235ENST00000640104 CLTCQ00610 1675 aaKnown RBP17.56■□□□□ 0.4
SPIN3-235ENST00000640104 MLECQ14165 292 aa17.56■□□□□ 0.4
SPIN3-235ENST00000640104 SLFN5Q08AF3 891 aa17.55■□□□□ 0.4
SPIN3-235ENST00000640104 PTPRMP28827 1452 aa17.55■□□□□ 0.4
SPIN3-235ENST00000640104 SRPK2P78362 688 aaKnown RBP17.55■□□□□ 0.4
SPIN3-235ENST00000640104 CRBNQ96SW2 442 aa17.54■□□□□ 0.4
SPIN3-235ENST00000640104 YTHDC2Q9H6S0 1430 aaKnown RBP17.54■□□□□ 0.4
SPIN3-235ENST00000640104 PRAM1Q96QH2 718 aa17.54■□□□□ 0.4
SPIN3-235ENST00000640104 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
SPIN3-235ENST00000640104 MINK1Q8N4C8 1332 aaPredicted RBP17.53■□□□□ 0.4
SPIN3-235ENST00000640104 SHPRHQ149N8 1683 aa17.53■□□□□ 0.4
SPIN3-235ENST00000640104 SPINK5Q9NQ38 1064 aaPredicted RBP17.53■□□□□ 0.4
SPIN3-235ENST00000640104 MSH5O43196 834 aa17.52■□□□□ 0.4
SPIN3-235ENST00000640104 POGKQ9P215 609 aa17.52■□□□□ 0.4
SPIN3-235ENST00000640104 ALKQ9UM73 1620 aa17.52■□□□□ 0.4
SPIN3-235ENST00000640104 C20orf194Q5TEA3 1177 aa17.52■□□□□ 0.4
SPIN3-235ENST00000640104 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.4
SPIN3-235ENST00000640104 MTHFSP49914 203 aa17.51■□□□□ 0.39
SPIN3-235ENST00000640104 A0A1W2PP64 1363 aa17.51■□□□□ 0.39
SPIN3-235ENST00000640104 NSD2O96028 1365 aa17.51■□□□□ 0.39
SPIN3-235ENST00000640104 TRMT2AQ8IZ69 625 aaKnown RBP17.51■□□□□ 0.39
SPIN3-235ENST00000640104 SPATA31D1Q6ZQQ2 1576 aa17.5■□□□□ 0.39
SPIN3-235ENST00000640104 A2ML1A8K2U0 1454 aa17.49■□□□□ 0.39
SPIN3-235ENST00000640104 NINLQ9Y2I6 1382 aa17.49■□□□□ 0.39
SPIN3-235ENST00000640104 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
SPIN3-235ENST00000640104 ARHGEF40Q8TER5 1519 aa17.49■□□□□ 0.39
SPIN3-235ENST00000640104 NKTRP30414 1462 aaKnown RBP17.48■□□□□ 0.39
SPIN3-235ENST00000640104 E9PSI1 815 aa17.48■□□□□ 0.39
SPIN3-235ENST00000640104 NGEFQ8N5V2 710 aa17.48■□□□□ 0.39
SPIN3-235ENST00000640104 CFAP53Q96M91 514 aa17.48■□□□□ 0.39
SPIN3-235ENST00000640104 ATAD2Q6PL18 1390 aa17.48■□□□□ 0.39
SPIN3-235ENST00000640104 ABCC11Q96J66 1382 aa17.47■□□□□ 0.39
SPIN3-235ENST00000640104 KIF13AQ9H1H9 1805 aa17.47■□□□□ 0.39
SPIN3-235ENST00000640104 RIMS2Q9UQ26 1411 aa17.46■□□□□ 0.39
SPIN3-235ENST00000640104 WWC1Q8IX03 1113 aa17.46■□□□□ 0.39
SPIN3-235ENST00000640104 RUNDC1Q96C34 613 aa17.46■□□□□ 0.39
SPIN3-235ENST00000640104 NEUROD2Q15784 382 aa17.45■□□□□ 0.38
SPIN3-235ENST00000640104 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.45■□□□□ 0.38
SPIN3-235ENST00000640104 RRP7AQ9Y3A4 280 aaKnown RBP17.45■□□□□ 0.38
SPIN3-235ENST00000640104 GGNBP2Q9H3C7 697 aa17.45■□□□□ 0.38
SPIN3-235ENST00000640104 TERF2IPQ9NYB0 399 aa17.44■□□□□ 0.38
SPIN3-235ENST00000640104 IQSEC2Q5JU85 1478 aa17.44■□□□□ 0.38
SPIN3-235ENST00000640104 CDK19Q9BWU1 502 aa17.44■□□□□ 0.38
SPIN3-235ENST00000640104 TCP11L2Q8N4U5 519 aa17.43■□□□□ 0.38
SPIN3-235ENST00000640104 CD163L1Q9NR16 1453 aa17.43■□□□□ 0.38
SPIN3-235ENST00000640104 ESF1Q9H501 851 aaKnown RBP17.43■□□□□ 0.38
SPIN3-235ENST00000640104 BCAR3O75815 825 aa17.41■□□□□ 0.38
SPIN3-235ENST00000640104 WAPLQ7Z5K2 1190 aa17.41■□□□□ 0.38
SPIN3-235ENST00000640104 ZMYM3Q14202 1370 aa17.41■□□□□ 0.38
SPIN3-235ENST00000640104 TCERG1O14776 1098 aaKnown RBP17.4■□□□□ 0.38
SPIN3-235ENST00000640104 U2AF1L5P0DN76 240 aaPredicted RBP17.4■□□□□ 0.38
SPIN3-235ENST00000640104 U2AF1Q01081 240 aaKnown RBP eCLIP17.4■□□□□ 0.38
SPIN3-235ENST00000640104 FYB1O15117 783 aa17.4■□□□□ 0.38
SPIN3-235ENST00000640104 HDGFL2Q7Z4V5 671 aaPredicted RBP17.4■□□□□ 0.38
SPIN3-235ENST00000640104 CABP1Q9NZU7 370 aa17.4■□□□□ 0.38
SPIN3-235ENST00000640104 SETD1AO15047 1707 aaKnown RBP17.39■□□□□ 0.38
SPIN3-235ENST00000640104 DLC1Q96QB1 1528 aa17.39■□□□□ 0.38
SPIN3-235ENST00000640104 NLRP1Q9C000 1473 aa17.38■□□□□ 0.37
SPIN3-235ENST00000640104 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
SPIN3-235ENST00000640104 ERICH6Q7L0X2 663 aa17.37■□□□□ 0.37
SPIN3-235ENST00000640104 SKAP1Q86WV1 359 aa17.37■□□□□ 0.37
SPIN3-235ENST00000640104 NRXN3Q9Y4C0 1643 aa17.36■□□□□ 0.37
SPIN3-235ENST00000640104 ANKRD26Q9UPS8 1709 aa17.36■□□□□ 0.37
SPIN3-235ENST00000640104 MED14O60244 1454 aa17.36■□□□□ 0.37
SPIN3-235ENST00000640104 U2SURPO15042 1029 aaKnown RBP17.35■□□□□ 0.37
SPIN3-235ENST00000640104 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.35■□□□□ 0.37
SPIN3-235ENST00000640104 KDM2BQ8NHM5 1336 aa17.35■□□□□ 0.37
SPIN3-235ENST00000640104 METP08581 1390 aa17.35■□□□□ 0.37
SPIN3-235ENST00000640104 WDR63Q8IWG1 891 aa17.34■□□□□ 0.37
SPIN3-235ENST00000640104 COL3A1P02461 1466 aaPredicted RBP17.34■□□□□ 0.37
SPIN3-235ENST00000640104 CCDC27Q2M243 656 aa17.34■□□□□ 0.37
SPIN3-235ENST00000640104 TNRQ92752 1358 aa17.33■□□□□ 0.37
SPIN3-235ENST00000640104 MS4A1P11836 297 aa17.33■□□□□ 0.36
SPIN3-235ENST00000640104 ANP32AP39687 249 aaKnown RBP17.33■□□□□ 0.36
SPIN3-235ENST00000640104 CENPQQ7L2Z9 268 aaPredicted RBP17.33■□□□□ 0.36
SPIN3-235ENST00000640104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.33■□□□□ 0.36
SPIN3-235ENST00000640104 ADGRB2O60241 1585 aa17.33■□□□□ 0.36
SPIN3-235ENST00000640104 PDE4AP27815 886 aa17.32■□□□□ 0.36
SPIN3-235ENST00000640104 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
SPIN3-235ENST00000640104 TXNDC2Q86VQ3 553 aa17.32■□□□□ 0.36
SPIN3-235ENST00000640104 KIF20BQ96Q89 1820 aa17.31■□□□□ 0.36
SPIN3-235ENST00000640104 ATP7BP35670 1465 aa17.31■□□□□ 0.36
SPIN3-235ENST00000640104 WASLO00401 505 aaPredicted RBP17.29■□□□□ 0.36
SPIN3-235ENST00000640104 PLEKHF1Q96S99 279 aa17.29■□□□□ 0.36
SPIN3-235ENST00000640104 HDGFP51858 240 aaKnown RBP17.29■□□□□ 0.36
SPIN3-235ENST00000640104 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
SPIN3-235ENST00000640104 FRAT1Q92837 279 aaPredicted RBP17.29■□□□□ 0.36
SPIN3-235ENST00000640104 BACH2Q9BYV9 841 aa17.29■□□□□ 0.36
SPIN3-235ENST00000640104 PDE3AQ14432 1141 aa17.28■□□□□ 0.36
SPIN3-235ENST00000640104 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
SPIN3-235ENST00000640104 DIAPH1O60610 1272 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms