RNA–Protein interactions for RNA: ENST00000639456.1

CROCCP2-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 2,575 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-204ENST00000639456 POLR3AO14802 1390 aaPredicted RBP23.11■■□□□ 1.29
CROCCP2-204ENST00000639456 NPATQ14207 1427 aa23.1■■□□□ 1.29
CROCCP2-204ENST00000639456 C14orf93Q9H972 538 aaKnown RBP23.1■■□□□ 1.29
CROCCP2-204ENST00000639456 IFT172Q9UG01 1749 aa23.1■■□□□ 1.29
CROCCP2-204ENST00000639456 USP35Q9P2H5 1018 aa23.09■■□□□ 1.29
CROCCP2-204ENST00000639456 SEC24BO95487 1268 aa23.09■■□□□ 1.29
CROCCP2-204ENST00000639456 RLBP1P12271 317 aa23.09■■□□□ 1.29
CROCCP2-204ENST00000639456 RTN4Q9NQC3 1192 aaKnown RBP23.09■■□□□ 1.29
CROCCP2-204ENST00000639456 RUNDC1Q96C34 613 aa23.08■■□□□ 1.29
CROCCP2-204ENST00000639456 CABP2Q9NPB3 220 aa23.07■■□□□ 1.28
CROCCP2-204ENST00000639456 RARSP54136 660 aaKnown RBP23.06■■□□□ 1.28
CROCCP2-204ENST00000639456 NRXN1Q9ULB1 1477 aa23.06■■□□□ 1.28
CROCCP2-204ENST00000639456 PDE3AQ14432 1141 aa23.06■■□□□ 1.28
CROCCP2-204ENST00000639456 CGNL1Q0VF96 1302 aa23.06■■□□□ 1.28
CROCCP2-204ENST00000639456 STK26Q9P289 416 aa23.05■■□□□ 1.28
CROCCP2-204ENST00000639456 SBNO2Q9Y2G9 1366 aa23.04■■□□□ 1.28
CROCCP2-204ENST00000639456 RAPGEF3O95398 923 aa23.04■■□□□ 1.28
CROCCP2-204ENST00000639456 U2AF1L5P0DN76 240 aaPredicted RBP23.04■■□□□ 1.28
CROCCP2-204ENST00000639456 U2AF1Q01081 240 aaKnown RBP eCLIP23.04■■□□□ 1.28
CROCCP2-204ENST00000639456 ADGRB3O60242 1522 aa23.04■■□□□ 1.28
CROCCP2-204ENST00000639456 SHPRHQ149N8 1683 aa23.04■■□□□ 1.28
CROCCP2-204ENST00000639456 ZNF518AQ6AHZ1 1483 aa23.03■■□□□ 1.28
CROCCP2-204ENST00000639456 PCDHB15Q9Y5E8 787 aa23.03■■□□□ 1.28
CROCCP2-204ENST00000639456 QRICH2Q9H0J4 1663 aa23.03■■□□□ 1.28
CROCCP2-204ENST00000639456 NEURL4Q96JN8 1562 aa23.03■■□□□ 1.28
CROCCP2-204ENST00000639456 MYO3AQ8NEV4 1616 aa23.01■■□□□ 1.27
CROCCP2-204ENST00000639456 NPM1P06748 294 aaKnown RBP eCLIP23■■□□□ 1.27
CROCCP2-204ENST00000639456 FRAT2O75474 233 aaPredicted RBP23■■□□□ 1.27
CROCCP2-204ENST00000639456 ADGRB1O14514 1584 aa22.99■■□□□ 1.27
CROCCP2-204ENST00000639456 NGEFQ8N5V2 710 aa22.99■■□□□ 1.27
CROCCP2-204ENST00000639456 TSR2Q969E8 191 aaKnown RBP22.99■■□□□ 1.27
CROCCP2-204ENST00000639456 USP19O94966 1318 aa22.99■■□□□ 1.27
CROCCP2-204ENST00000639456 CFAP53Q96M91 514 aa22.97■■□□□ 1.27
CROCCP2-204ENST00000639456 PPLO60437 1756 aa22.97■■□□□ 1.27
CROCCP2-204ENST00000639456 U2SURPO15042 1029 aaKnown RBP22.97■■□□□ 1.27
CROCCP2-204ENST00000639456 GGNBP2Q9H3C7 697 aa22.97■■□□□ 1.27
CROCCP2-204ENST00000639456 CD109Q6YHK3 1445 aa22.97■■□□□ 1.27
CROCCP2-204ENST00000639456 FRMPD1Q5SYB0 1578 aa22.96■■□□□ 1.27
CROCCP2-204ENST00000639456 SETBP1Q9Y6X0 1596 aa22.96■■□□□ 1.27
CROCCP2-204ENST00000639456 GSE1Q14687 1217 aa22.96■■□□□ 1.27
CROCCP2-204ENST00000639456 EVC2Q86UK5 1308 aa22.95■■□□□ 1.26
CROCCP2-204ENST00000639456 LMTK2Q8IWU2 1503 aa22.95■■□□□ 1.26
CROCCP2-204ENST00000639456 PHF23Q9BUL5 403 aaPredicted RBP22.95■■□□□ 1.26
CROCCP2-204ENST00000639456 SRPK2P78362 688 aaKnown RBP22.94■■□□□ 1.26
CROCCP2-204ENST00000639456 IQSEC2Q5JU85 1478 aa22.94■■□□□ 1.26
CROCCP2-204ENST00000639456 WDR63Q8IWG1 891 aa22.94■■□□□ 1.26
CROCCP2-204ENST00000639456 ZC3H13Q5T200 1668 aaKnown RBP22.93■■□□□ 1.26
CROCCP2-204ENST00000639456 POGZQ7Z3K3 1410 aa22.92■■□□□ 1.26
CROCCP2-204ENST00000639456 IDI1Q13907 227 aa22.92■■□□□ 1.26
CROCCP2-204ENST00000639456 PDZRN3Q9UPQ7 1066 aa22.92■■□□□ 1.26
CROCCP2-204ENST00000639456 SLKQ9H2G2 1235 aaPredicted RBP22.92■■□□□ 1.26
CROCCP2-204ENST00000639456 BRPF3Q9ULD4 1205 aa22.92■■□□□ 1.26
CROCCP2-204ENST00000639456 VGFO15240 615 aaPredicted RBP22.91■■□□□ 1.26
CROCCP2-204ENST00000639456 TULP4Q9NRJ4 1543 aa22.91■■□□□ 1.26
CROCCP2-204ENST00000639456 MAPK8IP3Q9UPT6 1336 aa22.9■■□□□ 1.26
CROCCP2-204ENST00000639456 GLI2P10070 1586 aa22.9■■□□□ 1.26
CROCCP2-204ENST00000639456 MINK1Q8N4C8 1332 aaPredicted RBP22.9■■□□□ 1.26
CROCCP2-204ENST00000639456 SIGLEC1Q9BZZ2 1709 aa22.89■■□□□ 1.25
CROCCP2-204ENST00000639456 ANKRD36BQ8N2N9 1353 aa22.89■■□□□ 1.25
CROCCP2-204ENST00000639456 NINLQ9Y2I6 1382 aa22.88■■□□□ 1.25
CROCCP2-204ENST00000639456 PMFBP1Q8TBY8 1022 aa22.88■■□□□ 1.25
CROCCP2-204ENST00000639456 ABCC3O15438 1527 aa22.88■■□□□ 1.25
CROCCP2-204ENST00000639456 EXOSC9Q06265 439 aaKnown RBP22.88■■□□□ 1.25
CROCCP2-204ENST00000639456 FTSJ3Q8IY81 847 aaKnown RBP22.88■■□□□ 1.25
CROCCP2-204ENST00000639456 MYH16Q9H6N6 1097 aa22.88■■□□□ 1.25
CROCCP2-204ENST00000639456 RPGRIP1LQ68CZ1 1315 aa22.87■■□□□ 1.25
CROCCP2-204ENST00000639456 A0A1W2PP64 1363 aa22.87■■□□□ 1.25
CROCCP2-204ENST00000639456 FBLN1P23142 703 aa22.87■■□□□ 1.25
CROCCP2-204ENST00000639456 SMC4Q9NTJ3 1288 aa22.86■■□□□ 1.25
CROCCP2-204ENST00000639456 CCDC27Q2M243 656 aa22.85■■□□□ 1.25
CROCCP2-204ENST00000639456 MLH3Q9UHC1 1453 aa22.84■■□□□ 1.25
CROCCP2-204ENST00000639456 MVPQ14764 893 aaKnown RBP22.84■■□□□ 1.25
CROCCP2-204ENST00000639456 SPRYD3Q8NCJ5 442 aa22.84■■□□□ 1.25
CROCCP2-204ENST00000639456 HECW2Q9P2P5 1572 aa22.84■■□□□ 1.25
CROCCP2-204ENST00000639456 PRAM1Q96QH2 718 aa22.83■■□□□ 1.25
CROCCP2-204ENST00000639456 ARHGEF28Q8N1W1 1705 aaKnown RBP22.83■■□□□ 1.25
CROCCP2-204ENST00000639456 VIRMAQ69YN4 1812 aaKnown RBP22.83■■□□□ 1.24
CROCCP2-204ENST00000639456 ZKSCAN2Q63HK3 967 aa22.83■■□□□ 1.24
CROCCP2-204ENST00000639456 DZIP1LQ8IYY4 767 aaKnown RBP22.83■■□□□ 1.24
CROCCP2-204ENST00000639456 TMPOP42166 694 aaKnown RBP22.82■■□□□ 1.24
CROCCP2-204ENST00000639456 CAMSAP1Q5T5Y3 1602 aa22.82■■□□□ 1.24
CROCCP2-204ENST00000639456 RWDD1Q9H446 243 aaPredicted RBP22.82■■□□□ 1.24
CROCCP2-204ENST00000639456 TRIM35Q9UPQ4 493 aa22.82■■□□□ 1.24
CROCCP2-204ENST00000639456 FYB1O15117 783 aa22.81■■□□□ 1.24
CROCCP2-204ENST00000639456 SSH1Q8WYL5 1049 aa22.81■■□□□ 1.24
CROCCP2-204ENST00000639456 TRIM27P14373 513 aa22.81■■□□□ 1.24
CROCCP2-204ENST00000639456 ITPRIPQ8IWB1 547 aa22.81■■□□□ 1.24
CROCCP2-204ENST00000639456 PLEKHF1Q96S99 279 aa22.81■■□□□ 1.24
CROCCP2-204ENST00000639456 NEXMIFQ5QGS0 1516 aa22.81■■□□□ 1.24
CROCCP2-204ENST00000639456 POGKQ9P215 609 aa22.8■■□□□ 1.24
CROCCP2-204ENST00000639456 NLRP1Q9C000 1473 aa22.8■■□□□ 1.24
CROCCP2-204ENST00000639456 FBXO31Q5XUX0 539 aaPredicted RBP22.78■■□□□ 1.24
CROCCP2-204ENST00000639456 RIPK4P57078 832 aa22.78■■□□□ 1.24
CROCCP2-204ENST00000639456 NOB1Q9ULX3 412 aaKnown RBP22.77■■□□□ 1.24
CROCCP2-204ENST00000639456 USP32Q8NFA0 1604 aa22.77■■□□□ 1.24
CROCCP2-204ENST00000639456 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.77■■□□□ 1.24
CROCCP2-204ENST00000639456 UPF2Q9HAU5 1272 aaKnown RBP22.76■■□□□ 1.23
CROCCP2-204ENST00000639456 ABCC11Q96J66 1382 aa22.76■■□□□ 1.23
CROCCP2-204ENST00000639456 BECN1Q14457 450 aa22.75■■□□□ 1.23
CROCCP2-204ENST00000639456 NSD2O96028 1365 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms