RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 PSMC1P62191 440 aaKnown RBP5.27□□□□□ -1.57
SCN3A-209ENST00000639244 COPB2P35606 906 aa5.27□□□□□ -1.57
SCN3A-209ENST00000639244 DEF6Q9H4E7 631 aa5.27□□□□□ -1.57
SCN3A-209ENST00000639244 HMMRO75330 724 aa5.27□□□□□ -1.57
SCN3A-209ENST00000639244 IRX5P78411 483 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-209ENST00000639244 EPB41L2O43491 1005 aaKnown RBP5.27□□□□□ -1.57
SCN3A-209ENST00000639244 RGL3Q3MIN7 710 aa5.27□□□□□ -1.57
SCN3A-209ENST00000639244 SCP2P22307 547 aa5.26□□□□□ -1.57
SCN3A-209ENST00000639244 HELBQ8NG08 1087 aaPredicted RBP5.26□□□□□ -1.57
SCN3A-209ENST00000639244 ADRA2BP18089 450 aa5.26□□□□□ -1.57
SCN3A-209ENST00000639244 MSNP26038 577 aaKnown RBP5.26□□□□□ -1.57
SCN3A-209ENST00000639244 KIF16BQ96L93 1317 aa5.26□□□□□ -1.57
SCN3A-209ENST00000639244 WDHD1O75717 1129 aaPredicted RBP5.26□□□□□ -1.57
SCN3A-209ENST00000639244 CREB3O43889 395 aa5.26□□□□□ -1.57
SCN3A-209ENST00000639244 MICAL1Q8TDZ2 1067 aa5.26□□□□□ -1.57
SCN3A-209ENST00000639244 SMC3Q9UQE7 1217 aa5.26□□□□□ -1.57
SCN3A-209ENST00000639244 CCDC91Q7Z6B0 441 aa5.25□□□□□ -1.57
SCN3A-209ENST00000639244 TESPA1A2RU30 521 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-209ENST00000639244 KDM4CQ9H3R0 1056 aa5.25□□□□□ -1.57
SCN3A-209ENST00000639244 SNRNP27Q8WVK2 155 aaKnown RBP5.25□□□□□ -1.57
SCN3A-209ENST00000639244 DONSONQ9NYP3 566 aa5.25□□□□□ -1.57
SCN3A-209ENST00000639244 NINLQ9Y2I6 1382 aa5.25□□□□□ -1.57
SCN3A-209ENST00000639244 STK10O94804 968 aaKnown RBP5.25□□□□□ -1.57
SCN3A-209ENST00000639244 SSFA2P28290 1259 aa5.25□□□□□ -1.57
SCN3A-209ENST00000639244 CWC15Q9P013 229 aaKnown RBP5.25□□□□□ -1.57
SCN3A-209ENST00000639244 SYNPO2Q9UMS6 1093 aa5.25□□□□□ -1.57
SCN3A-209ENST00000639244 PPP1R12AO14974 1030 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-209ENST00000639244 HSP90AB1P08238 724 aaKnown RBP5.24□□□□□ -1.57
SCN3A-209ENST00000639244 CCDC175P0C221 793 aa5.24□□□□□ -1.57
SCN3A-209ENST00000639244 KIF5CO60282 957 aa5.24□□□□□ -1.57
SCN3A-209ENST00000639244 FOXD4L1Q9NU39 408 aa5.24□□□□□ -1.57
SCN3A-209ENST00000639244 NOM1Q5C9Z4 860 aaKnown RBP5.24□□□□□ -1.57
SCN3A-209ENST00000639244 TMC1Q8TDI8 760 aa5.24□□□□□ -1.57
SCN3A-209ENST00000639244 RIOK3O14730 519 aaKnown RBP5.24□□□□□ -1.57
SCN3A-209ENST00000639244 STK11IPQ8N1F8 1099 aa5.24□□□□□ -1.57
SCN3A-209ENST00000639244 ABCD1P33897 745 aa5.24□□□□□ -1.57
SCN3A-209ENST00000639244 RMI1Q9H9A7 625 aa5.24□□□□□ -1.57
SCN3A-209ENST00000639244 EIF3JO75822 258 aaKnown RBP5.24□□□□□ -1.57
SCN3A-209ENST00000639244 PAX3P23760 479 aa5.24□□□□□ -1.57
SCN3A-209ENST00000639244 SPOCK3Q9BQ16 436 aa5.24□□□□□ -1.57
SCN3A-209ENST00000639244 PPP4R2Q9NY27 417 aa5.24□□□□□ -1.57
SCN3A-209ENST00000639244 RPGRIP1LQ68CZ1 1315 aa5.23□□□□□ -1.57
SCN3A-209ENST00000639244 PUS10Q3MIT2 529 aaKnown RBP5.23□□□□□ -1.57
SCN3A-209ENST00000639244 JMYQ8N9B5 988 aa5.23□□□□□ -1.57
SCN3A-209ENST00000639244 ZSCAN20P17040 1043 aaPredicted RBP5.23□□□□□ -1.57
SCN3A-209ENST00000639244 CT47B1P0C2W7 299 aaPredicted RBP5.23□□□□□ -1.57
SCN3A-209ENST00000639244 TPX2Q9ULW0 747 aaKnown RBP5.23□□□□□ -1.57
SCN3A-209ENST00000639244 COMMD10Q9Y6G5 202 aa5.23□□□□□ -1.57
SCN3A-209ENST00000639244 SMAPO00193 183 aa5.23□□□□□ -1.57
SCN3A-209ENST00000639244 MCCD1P59942 119 aaPredicted RBP5.23□□□□□ -1.57
SCN3A-209ENST00000639244 CT47A1Q5JQC4 288 aaPredicted RBP5.23□□□□□ -1.57
SCN3A-209ENST00000639244 DRC1Q96MC2 740 aa5.23□□□□□ -1.57
SCN3A-209ENST00000639244 PEX19P40855 299 aa5.23□□□□□ -1.57
SCN3A-209ENST00000639244 GOPCQ9HD26 462 aa5.23□□□□□ -1.57
SCN3A-209ENST00000639244 DDX49Q9Y6V7 483 aaKnown RBP5.23□□□□□ -1.57
SCN3A-209ENST00000639244 NEXNQ0ZGT2 675 aa5.23□□□□□ -1.57
SCN3A-209ENST00000639244 UVSSAQ2YD98 709 aa5.23□□□□□ -1.57
SCN3A-209ENST00000639244 GPBP1L1Q9HC44 474 aaPredicted RBP5.23□□□□□ -1.57
SCN3A-209ENST00000639244 BIRC2Q13490 618 aa5.22□□□□□ -1.57
SCN3A-209ENST00000639244 GJC2Q5T442 439 aaPredicted RBP5.22□□□□□ -1.57
SCN3A-209ENST00000639244 TAX1BP1Q86VP1 789 aa5.22□□□□□ -1.57
SCN3A-209ENST00000639244 PDILTQ8N807 584 aa5.22□□□□□ -1.57
SCN3A-209ENST00000639244 MED4Q9NPJ6 270 aa5.22□□□□□ -1.57
SCN3A-209ENST00000639244 RRAGDQ9NQL2 400 aaPredicted RBP5.22□□□□□ -1.57
SCN3A-209ENST00000639244 CHCHD3Q9NX63 227 aaKnown RBP5.22□□□□□ -1.57
SCN3A-209ENST00000639244 CDC37Q16543 378 aaPredicted RBP5.22□□□□□ -1.57
SCN3A-209ENST00000639244 PAX7P23759 505 aa5.21□□□□□ -1.57
SCN3A-209ENST00000639244 SH3BGRP55822 239 aaPredicted RBP5.21□□□□□ -1.57
SCN3A-209ENST00000639244 GBP4Q96PP9 640 aa5.21□□□□□ -1.57
SCN3A-209ENST00000639244 LARP6Q9BRS8 491 aaKnown RBP5.21□□□□□ -1.58
SCN3A-209ENST00000639244 RSPH9Q9H1X1 276 aaPredicted RBP5.21□□□□□ -1.58
SCN3A-209ENST00000639244 UTP6Q9NYH9 597 aaKnown RBP5.21□□□□□ -1.58
SCN3A-209ENST00000639244 AMOTL2Q9Y2J4 779 aa5.21□□□□□ -1.58
SCN3A-209ENST00000639244 PAXBP1Q9Y5B6 917 aa5.21□□□□□ -1.58
SCN3A-209ENST00000639244 ERICH4A6NGS2 130 aa5.21□□□□□ -1.58
SCN3A-209ENST00000639244 MAP4K4O95819 1239 aaPredicted RBP5.21□□□□□ -1.58
SCN3A-209ENST00000639244 TNNT1P13805 278 aa5.21□□□□□ -1.58
SCN3A-209ENST00000639244 PKD2Q13563 968 aa5.21□□□□□ -1.58
SCN3A-209ENST00000639244 ICE2Q659A1 982 aa5.21□□□□□ -1.58
SCN3A-209ENST00000639244 AMOTL1Q8IY63 956 aa5.21□□□□□ -1.58
SCN3A-209ENST00000639244 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.21□□□□□ -1.58
SCN3A-209ENST00000639244 CHMP3Q9Y3E7 222 aa5.21□□□□□ -1.58
SCN3A-209ENST00000639244 SUGT1Q9Y2Z0 365 aa5.21□□□□□ -1.58
SCN3A-209ENST00000639244 CCDC196A0A1B0GTZ2 297 aa5.21□□□□□ -1.58
SCN3A-209ENST00000639244 SMC5Q8IY18 1101 aa5.21□□□□□ -1.58
SCN3A-209ENST00000639244 FAM184AQ8NB25 1140 aa5.21□□□□□ -1.58
SCN3A-209ENST00000639244 EXOC5O00471 708 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 CBFA2T2O43439 604 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 NBPF7P0C2Y1 421 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-209ENST00000639244 SYNRGQ9UMZ2 1314 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 PRR29P0C7W0 189 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 RMDN2Q96LZ7 410 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 RANBP17Q9H2T7 1088 aaKnown RBP5.2□□□□□ -1.58
SCN3A-209ENST00000639244 RDXP35241 583 aaKnown RBP5.2□□□□□ -1.58
SCN3A-209ENST00000639244 FLT3P36888 993 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 OGFOD1Q8N543 542 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 GABPB1Q06547 395 aaPredicted RBP5.2□□□□□ -1.58
SCN3A-209ENST00000639244 TRIM52Q96A61 297 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 STK26Q9P289 416 aa5.2□□□□□ -1.58
SCN3A-209ENST00000639244 IPO5O00410 1097 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms