RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 RILPL2Q969X0 211 aa16.96■□□□□ 0.3
SCARB2-215ENST00000639145 NUDT16Q96DE0 195 aaKnown RBP16.96■□□□□ 0.3
SCARB2-215ENST00000639145 TRIM44Q96DX7 344 aaPredicted RBP16.96■□□□□ 0.3
SCARB2-215ENST00000639145 RBM19Q9Y4C8 960 aaKnown RBP16.96■□□□□ 0.3
SCARB2-215ENST00000639145 DENND4BO75064 1496 aaPredicted RBP16.95■□□□□ 0.3
SCARB2-215ENST00000639145 DZIP1LQ8IYY4 767 aaKnown RBP16.95■□□□□ 0.3
SCARB2-215ENST00000639145 API5Q9BZZ5 524 aaKnown RBP16.95■□□□□ 0.3
SCARB2-215ENST00000639145 TOM1L2Q6ZVM7 507 aa16.95■□□□□ 0.3
SCARB2-215ENST00000639145 GNL2Q13823 731 aaKnown RBP16.94■□□□□ 0.3
SCARB2-215ENST00000639145 ADGRF5Q8IZF2 1346 aa16.94■□□□□ 0.3
SCARB2-215ENST00000639145 GPATCH8Q9UKJ3 1502 aaKnown RBP16.94■□□□□ 0.3
SCARB2-215ENST00000639145 DDX54Q8TDD1 881 aaKnown RBP16.94■□□□□ 0.3
SCARB2-215ENST00000639145 KIF14Q15058 1648 aa16.92■□□□□ 0.3
SCARB2-215ENST00000639145 FOXO3O43524 673 aa16.92■□□□□ 0.3
SCARB2-215ENST00000639145 AMOTL2Q9Y2J4 779 aa16.92■□□□□ 0.3
SCARB2-215ENST00000639145 PLEKHO1Q53GL0 409 aaPredicted RBP16.92■□□□□ 0.3
SCARB2-215ENST00000639145 KLHL34Q8N239 644 aa16.92■□□□□ 0.3
SCARB2-215ENST00000639145 RIC3Q7Z5B4 369 aa16.91■□□□□ 0.3
SCARB2-215ENST00000639145 RBM42Q9BTD8 480 aaKnown RBP16.91■□□□□ 0.3
SCARB2-215ENST00000639145 DDX19BQ9UMR2 479 aa16.91■□□□□ 0.3
SCARB2-215ENST00000639145 AKNAQ7Z591 1439 aa16.91■□□□□ 0.3
SCARB2-215ENST00000639145 GAS2L2Q8NHY3 880 aa16.91■□□□□ 0.3
SCARB2-215ENST00000639145 ASXL2Q76L83 1435 aa16.9■□□□□ 0.3
SCARB2-215ENST00000639145 FAM177BA6PVY3 158 aa16.9■□□□□ 0.3
SCARB2-215ENST00000639145 TATP17735 454 aaPredicted RBP16.9■□□□□ 0.3
SCARB2-215ENST00000639145 ZNF428Q96B54 188 aa16.89■□□□□ 0.29
SCARB2-215ENST00000639145 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.29
SCARB2-215ENST00000639145 PANK1Q8TE04 598 aa16.89■□□□□ 0.29
SCARB2-215ENST00000639145 ZNF530Q6P9A1 599 aaPredicted RBP16.89■□□□□ 0.29
SCARB2-215ENST00000639145 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
SCARB2-215ENST00000639145 FBLN1P23142 703 aa16.87■□□□□ 0.29
SCARB2-215ENST00000639145 HSP90B1P14625 803 aaKnown RBP16.87■□□□□ 0.29
SCARB2-215ENST00000639145 TSR2Q969E8 191 aaKnown RBP16.87■□□□□ 0.29
SCARB2-215ENST00000639145 ATAD2Q6PL18 1390 aa16.87■□□□□ 0.29
SCARB2-215ENST00000639145 EXOSC9Q06265 439 aaKnown RBP16.87■□□□□ 0.29
SCARB2-215ENST00000639145 CENPQQ7L2Z9 268 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-215ENST00000639145 KIF16BQ96L93 1317 aa16.86■□□□□ 0.29
SCARB2-215ENST00000639145 DHX29Q7Z478 1369 aaKnown RBP16.86■□□□□ 0.29
SCARB2-215ENST00000639145 EIF4G3O43432 1585 aaKnown RBP16.86■□□□□ 0.29
SCARB2-215ENST00000639145 G3BP1Q13283 466 aaKnown RBP eCLIP16.84■□□□□ 0.29
SCARB2-215ENST00000639145 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.84■□□□□ 0.29
SCARB2-215ENST00000639145 IFIT2P09913 472 aaKnown RBP16.84■□□□□ 0.29
SCARB2-215ENST00000639145 TRAPPC8Q9Y2L5 1435 aa16.83■□□□□ 0.28
SCARB2-215ENST00000639145 VPS37DQ86XT2 251 aa16.83■□□□□ 0.28
SCARB2-215ENST00000639145 LNPKQ9C0E8 428 aa16.83■□□□□ 0.28
SCARB2-215ENST00000639145 TWISTNBQ3B726 338 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-215ENST00000639145 NME9Q86XW9 330 aa16.82■□□□□ 0.28
SCARB2-215ENST00000639145 DIAPH3Q9NSV4 1193 aa16.81■□□□□ 0.28
SCARB2-215ENST00000639145 PHF8Q9UPP1 1060 aa16.81■□□□□ 0.28
SCARB2-215ENST00000639145 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
SCARB2-215ENST00000639145 DISP1Q96F81 1524 aa16.81■□□□□ 0.28
SCARB2-215ENST00000639145 HDGFL1Q5TGJ6 251 aa16.81■□□□□ 0.28
SCARB2-215ENST00000639145 SMG6Q86US8 1419 aaKnown RBP16.8■□□□□ 0.28
SCARB2-215ENST00000639145 ADAMTS2O95450 1211 aa16.8■□□□□ 0.28
SCARB2-215ENST00000639145 UBTFL1P0CB47 393 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-215ENST00000639145 CABP4P57796 275 aa16.8■□□□□ 0.28
SCARB2-215ENST00000639145 AMER1Q5JTC6 1135 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-215ENST00000639145 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
SCARB2-215ENST00000639145 NEUROD6Q96NK8 337 aa16.8■□□□□ 0.28
SCARB2-215ENST00000639145 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
SCARB2-215ENST00000639145 PLCH2O75038 1416 aa16.8■□□□□ 0.28
SCARB2-215ENST00000639145 NSD3Q9BZ95 1437 aa16.8■□□□□ 0.28
SCARB2-215ENST00000639145 CCDC30Q5VVM6 783 aa16.79■□□□□ 0.28
SCARB2-215ENST00000639145 FBXW7Q969H0 707 aa16.79■□□□□ 0.28
SCARB2-215ENST00000639145 PPP6R1Q9UPN7 881 aa16.79■□□□□ 0.28
SCARB2-215ENST00000639145 NOS1P29475 1434 aa16.79■□□□□ 0.28
SCARB2-215ENST00000639145 MAP3K1Q13233 1512 aa16.78■□□□□ 0.28
SCARB2-215ENST00000639145 RAPGEF6Q8TEU7 1601 aa16.78■□□□□ 0.28
SCARB2-215ENST00000639145 WASLO00401 505 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-215ENST00000639145 APPP05067 770 aa16.78■□□□□ 0.28
SCARB2-215ENST00000639145 CLSTN1O94985 981 aa16.78■□□□□ 0.28
SCARB2-215ENST00000639145 SLC4A2P04920 1241 aa16.78■□□□□ 0.28
SCARB2-215ENST00000639145 DNTTIP2Q5QJE6 756 aaKnown RBP16.78■□□□□ 0.28
SCARB2-215ENST00000639145 FOXD4L5Q5VV16 416 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-215ENST00000639145 FOXD4L4Q8WXT5 416 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-215ENST00000639145 GZF1Q9H116 711 aaPredicted RBP16.77■□□□□ 0.28
SCARB2-215ENST00000639145 THUMPD2Q9BTF0 503 aaKnown RBP16.76■□□□□ 0.27
SCARB2-215ENST00000639145 SPG7Q9UQ90 795 aa16.76■□□□□ 0.27
SCARB2-215ENST00000639145 PDE4AP27815 886 aa16.75■□□□□ 0.27
SCARB2-215ENST00000639145 USHBP1Q8N6Y0 703 aa16.75■□□□□ 0.27
SCARB2-215ENST00000639145 EMILIN1Q9Y6C2 1016 aa16.75■□□□□ 0.27
SCARB2-215ENST00000639145 MAPKBP1O60336 1514 aa16.75■□□□□ 0.27
SCARB2-215ENST00000639145 SYCP2Q9BX26 1530 aa16.75■□□□□ 0.27
SCARB2-215ENST00000639145 UGGT2Q9NYU1 1516 aa16.75■□□□□ 0.27
SCARB2-215ENST00000639145 ST18O60284 1047 aa16.74■□□□□ 0.27
SCARB2-215ENST00000639145 BCAR3O75815 825 aa16.74■□□□□ 0.27
SCARB2-215ENST00000639145 HSPA2P54652 639 aa16.74■□□□□ 0.27
SCARB2-215ENST00000639145 TNRQ92752 1358 aa16.74■□□□□ 0.27
SCARB2-215ENST00000639145 RAD21O60216 631 aa16.74■□□□□ 0.27
SCARB2-215ENST00000639145 KCNH5Q8NCM2 988 aa16.74■□□□□ 0.27
SCARB2-215ENST00000639145 KIAA0556O60303 1618 aa16.74■□□□□ 0.27
SCARB2-215ENST00000639145 MYL6BP14649 208 aa16.74■□□□□ 0.27
SCARB2-215ENST00000639145 C14orf93Q9H972 538 aaKnown RBP16.74■□□□□ 0.27
SCARB2-215ENST00000639145 KDM5BQ9UGL1 1544 aa16.74■□□□□ 0.27
SCARB2-215ENST00000639145 SURF6O75683 361 aaKnown RBP16.74■□□□□ 0.27
SCARB2-215ENST00000639145 FAM161AQ3B820 660 aa16.74■□□□□ 0.27
SCARB2-215ENST00000639145 GBP4Q96PP9 640 aa16.74■□□□□ 0.27
SCARB2-215ENST00000639145 C1orf115Q9H7X2 142 aa16.73■□□□□ 0.27
SCARB2-215ENST00000639145 MIS18AQ9NYP9 233 aa16.73■□□□□ 0.27
SCARB2-215ENST00000639145 SLC4A3P48751 1232 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms