RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 C22orf23Q9BZE7 217 aa17.65■□□□□ 0.42
SCARB2-208ENST00000638372 SULT6B1Q6IMI4 303 aa17.65■□□□□ 0.42
SCARB2-208ENST00000638372 SYTL4Q96C24 671 aaPredicted RBP17.65■□□□□ 0.42
SCARB2-208ENST00000638372 DDX11L8A8MPP1 907 aa17.64■□□□□ 0.42
SCARB2-208ENST00000638372 C1orf115Q9H7X2 142 aa17.64■□□□□ 0.41
SCARB2-208ENST00000638372 ZNF608Q9ULD9 1512 aaPredicted RBP17.64■□□□□ 0.41
SCARB2-208ENST00000638372 NCOA1Q15788 1441 aa17.64■□□□□ 0.41
SCARB2-208ENST00000638372 IFIT2P09913 472 aaKnown RBP17.64■□□□□ 0.41
SCARB2-208ENST00000638372 CAMSAP2Q08AD1 1489 aa17.64■□□□□ 0.41
SCARB2-208ENST00000638372 TWISTNBQ3B726 338 aaPredicted RBP17.63■□□□□ 0.41
SCARB2-208ENST00000638372 CCDC141Q6ZP82 1450 aa17.63■□□□□ 0.41
SCARB2-208ENST00000638372 PEG3Q9GZU2 1588 aa17.63■□□□□ 0.41
SCARB2-208ENST00000638372 PTPN23Q9H3S7 1636 aa17.62■□□□□ 0.41
SCARB2-208ENST00000638372 DDX58O95786 925 aaKnown RBP17.62■□□□□ 0.41
SCARB2-208ENST00000638372 GRIN2AQ12879 1464 aa17.62■□□□□ 0.41
SCARB2-208ENST00000638372 PDE3AQ14432 1141 aa17.62■□□□□ 0.41
SCARB2-208ENST00000638372 PDZRN3Q9UPQ7 1066 aa17.62■□□□□ 0.41
SCARB2-208ENST00000638372 ATF3P18847 181 aa17.61■□□□□ 0.41
SCARB2-208ENST00000638372 ESCO1Q5FWF5 840 aa17.61■□□□□ 0.41
SCARB2-208ENST00000638372 MAP3K1Q13233 1512 aa17.61■□□□□ 0.41
SCARB2-208ENST00000638372 NOB1Q9ULX3 412 aaKnown RBP17.6■□□□□ 0.41
SCARB2-208ENST00000638372 G3BP1Q13283 466 aaKnown RBP eCLIP17.6■□□□□ 0.41
SCARB2-208ENST00000638372 AAMPQ13685 434 aa17.6■□□□□ 0.41
SCARB2-208ENST00000638372 RRS1Q15050 365 aaKnown RBP17.6■□□□□ 0.41
SCARB2-208ENST00000638372 CHMP5Q9NZZ3 219 aa17.59■□□□□ 0.41
SCARB2-208ENST00000638372 UBTFL1P0CB47 393 aaPredicted RBP17.59■□□□□ 0.41
SCARB2-208ENST00000638372 ZKSCAN1P17029 563 aaPredicted RBP17.59■□□□□ 0.41
SCARB2-208ENST00000638372 RUFY2Q8WXA3 655 aa17.59■□□□□ 0.41
SCARB2-208ENST00000638372 ARID3AQ99856 593 aa17.59■□□□□ 0.41
SCARB2-208ENST00000638372 SF3A1Q15459 793 aaKnown RBP17.58■□□□□ 0.41
SCARB2-208ENST00000638372 AMER1Q5JTC6 1135 aaPredicted RBP17.58■□□□□ 0.41
SCARB2-208ENST00000638372 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.58■□□□□ 0.41
SCARB2-208ENST00000638372 CUL7Q14999 1698 aa17.58■□□□□ 0.41
SCARB2-208ENST00000638372 INTS3Q68E01 1043 aaKnown RBP17.58■□□□□ 0.4
SCARB2-208ENST00000638372 CSPP1Q1MSJ5 1256 aa17.58■□□□□ 0.4
SCARB2-208ENST00000638372 SMG6Q86US8 1419 aaKnown RBP17.57■□□□□ 0.4
SCARB2-208ENST00000638372 H3BQV1 296 aa17.57■□□□□ 0.4
SCARB2-208ENST00000638372 IFFO2Q5TF58 517 aa17.57■□□□□ 0.4
SCARB2-208ENST00000638372 RIC3Q7Z5B4 369 aa17.57■□□□□ 0.4
SCARB2-208ENST00000638372 FAM184AQ8NB25 1140 aa17.57■□□□□ 0.4
SCARB2-208ENST00000638372 WAPLQ7Z5K2 1190 aa17.56■□□□□ 0.4
SCARB2-208ENST00000638372 GAS2L2Q8NHY3 880 aa17.56■□□□□ 0.4
SCARB2-208ENST00000638372 KIF3AQ9Y496 699 aa17.56■□□□□ 0.4
SCARB2-208ENST00000638372 ADGRF5Q8IZF2 1346 aa17.56■□□□□ 0.4
SCARB2-208ENST00000638372 RPGRIP1LQ68CZ1 1315 aa17.56■□□□□ 0.4
SCARB2-208ENST00000638372 NFKBIBQ15653 356 aa17.56■□□□□ 0.4
SCARB2-208ENST00000638372 WWC1Q8IX03 1113 aa17.55■□□□□ 0.4
SCARB2-208ENST00000638372 SLC4A2P04920 1241 aa17.55■□□□□ 0.4
SCARB2-208ENST00000638372 RTEL1-TNFRSF6BF6WH68 1400 aa17.55■□□□□ 0.4
SCARB2-208ENST00000638372 NSD3Q9BZ95 1437 aa17.55■□□□□ 0.4
SCARB2-208ENST00000638372 WDR63Q8IWG1 891 aa17.55■□□□□ 0.4
SCARB2-208ENST00000638372 SURF6O75683 361 aaKnown RBP17.55■□□□□ 0.4
SCARB2-208ENST00000638372 ZNF692Q9BU19 519 aaPredicted RBP17.55■□□□□ 0.4
SCARB2-208ENST00000638372 THEMISQ8N1K5 641 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-208ENST00000638372 ZNF428Q96B54 188 aa17.54■□□□□ 0.4
SCARB2-208ENST00000638372 PTPRKQ15262 1439 aa17.54■□□□□ 0.4
SCARB2-208ENST00000638372 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
SCARB2-208ENST00000638372 PROSER2Q86WR7 435 aaPredicted RBP17.54■□□□□ 0.4
SCARB2-208ENST00000638372 MCTP1Q6DN14 999 aa17.54■□□□□ 0.4
SCARB2-208ENST00000638372 THUMPD2Q9BTF0 503 aaKnown RBP17.53■□□□□ 0.4
SCARB2-208ENST00000638372 GPRASP1Q5JY77 1395 aa17.53■□□□□ 0.4
SCARB2-208ENST00000638372 CDC45O75419 566 aa17.53■□□□□ 0.4
SCARB2-208ENST00000638372 CCDC30Q5VVM6 783 aa17.53■□□□□ 0.4
SCARB2-208ENST00000638372 BACH2Q9BYV9 841 aa17.53■□□□□ 0.4
SCARB2-208ENST00000638372 SLFN5Q08AF3 891 aa17.53■□□□□ 0.4
SCARB2-208ENST00000638372 ATP6V1DQ9Y5K8 247 aa17.53■□□□□ 0.4
SCARB2-208ENST00000638372 PHF14O94880 888 aa17.52■□□□□ 0.4
SCARB2-208ENST00000638372 TMX4Q9H1E5 349 aaPredicted RBP17.52■□□□□ 0.4
SCARB2-208ENST00000638372 CCDC61Q9Y6R9 512 aa17.52■□□□□ 0.4
SCARB2-208ENST00000638372 SKAP1Q86WV1 359 aa17.52■□□□□ 0.4
SCARB2-208ENST00000638372 HSP90AB4PQ58FF6 505 aa17.52■□□□□ 0.39
SCARB2-208ENST00000638372 NEUROD6Q96NK8 337 aa17.52■□□□□ 0.39
SCARB2-208ENST00000638372 GNAI3P08754 354 aa17.51■□□□□ 0.39
SCARB2-208ENST00000638372 IDI1Q13907 227 aa17.51■□□□□ 0.39
SCARB2-208ENST00000638372 RPRD2Q5VT52 1461 aaKnown RBP17.51■□□□□ 0.39
SCARB2-208ENST00000638372 APPP05067 770 aa17.51■□□□□ 0.39
SCARB2-208ENST00000638372 SKOR2Q2VWA4 1001 aaPredicted RBP17.51■□□□□ 0.39
SCARB2-208ENST00000638372 RASSF8Q8NHQ8 419 aa17.51■□□□□ 0.39
SCARB2-208ENST00000638372 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
SCARB2-208ENST00000638372 FBXO31Q5XUX0 539 aaPredicted RBP17.51■□□□□ 0.39
SCARB2-208ENST00000638372 TMPOP42166 694 aaKnown RBP17.51■□□□□ 0.39
SCARB2-208ENST00000638372 C20orf194Q5TEA3 1177 aa17.51■□□□□ 0.39
SCARB2-208ENST00000638372 HDGFL1Q5TGJ6 251 aa17.51■□□□□ 0.39
SCARB2-208ENST00000638372 CD109Q6YHK3 1445 aa17.51■□□□□ 0.39
SCARB2-208ENST00000638372 ATAD2Q6PL18 1390 aa17.51■□□□□ 0.39
SCARB2-208ENST00000638372 VPS37CA5D8V6 355 aaPredicted RBP17.5■□□□□ 0.39
SCARB2-208ENST00000638372 G3V3G9 751 aa17.5■□□□□ 0.39
SCARB2-208ENST00000638372 DCAF8Q5TAQ9 597 aa17.5■□□□□ 0.39
SCARB2-208ENST00000638372 CREBRFQ8IUR6 639 aa17.5■□□□□ 0.39
SCARB2-208ENST00000638372 NUDT16Q96DE0 195 aaKnown RBP17.5■□□□□ 0.39
SCARB2-208ENST00000638372 MVPQ14764 893 aaKnown RBP17.49■□□□□ 0.39
SCARB2-208ENST00000638372 ERC2O15083 957 aa17.49■□□□□ 0.39
SCARB2-208ENST00000638372 CLASRPQ8N2M8 674 aaKnown RBP17.49■□□□□ 0.39
SCARB2-208ENST00000638372 THOC2Q8NI27 1593 aaKnown RBP17.48■□□□□ 0.39
SCARB2-208ENST00000638372 CLSTN1O94985 981 aa17.48■□□□□ 0.39
SCARB2-208ENST00000638372 CCDC34Q96HJ3 373 aa17.48■□□□□ 0.39
SCARB2-208ENST00000638372 FCHSD2O94868 740 aa17.47■□□□□ 0.39
SCARB2-208ENST00000638372 PLEKHO1Q53GL0 409 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-208ENST00000638372 RNF20Q5VTR2 975 aa17.47■□□□□ 0.39
SCARB2-208ENST00000638372 XPCQ01831 940 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms