RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 NOS1P29475 1434 aa12.96□□□□□ -0.33
SMARCA2-265ENST00000638139 QRICH2Q9H0J4 1663 aa12.96□□□□□ -0.33
SMARCA2-265ENST00000638139 IQSEC2Q5JU85 1478 aa12.96□□□□□ -0.34
SMARCA2-265ENST00000638139 MAPK8IP3Q9UPT6 1336 aa12.96□□□□□ -0.34
SMARCA2-265ENST00000638139 SEC24BO95487 1268 aa12.96□□□□□ -0.34
SMARCA2-265ENST00000638139 TNNT2P45379 298 aaPredicted RBP12.96□□□□□ -0.34
SMARCA2-265ENST00000638139 NEUROD2Q15784 382 aa12.96□□□□□ -0.34
SMARCA2-265ENST00000638139 RUNDC1Q96C34 613 aa12.96□□□□□ -0.34
SMARCA2-265ENST00000638139 RRP7AQ9Y3A4 280 aaKnown RBP12.96□□□□□ -0.34
SMARCA2-265ENST00000638139 BRPF3Q9ULD4 1205 aa12.95□□□□□ -0.34
SMARCA2-265ENST00000638139 KIDINS220Q9ULH0 1771 aa12.95□□□□□ -0.34
SMARCA2-265ENST00000638139 ADGRB3O60242 1522 aa12.95□□□□□ -0.34
SMARCA2-265ENST00000638139 RARSP54136 660 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-265ENST00000638139 SLC12A5Q9H2X9 1139 aa12.95□□□□□ -0.34
SMARCA2-265ENST00000638139 TCP11L2Q8N4U5 519 aa12.94□□□□□ -0.34
SMARCA2-265ENST00000638139 PHF23Q9BUL5 403 aaPredicted RBP12.94□□□□□ -0.34
SMARCA2-265ENST00000638139 TRAK1Q9UPV9 953 aa12.94□□□□□ -0.34
SMARCA2-265ENST00000638139 CFAP65Q6ZU64 1925 aaKnown RBP12.94□□□□□ -0.34
SMARCA2-265ENST00000638139 PPLO60437 1756 aa12.94□□□□□ -0.34
SMARCA2-265ENST00000638139 LMTK2Q8IWU2 1503 aa12.94□□□□□ -0.34
SMARCA2-265ENST00000638139 CHGAP10645 457 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-265ENST00000638139 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
SMARCA2-265ENST00000638139 USP32Q8NFA0 1604 aa12.92□□□□□ -0.34
SMARCA2-265ENST00000638139 RLBP1P12271 317 aa12.92□□□□□ -0.34
SMARCA2-265ENST00000638139 NLRP1Q9C000 1473 aa12.92□□□□□ -0.34
SMARCA2-265ENST00000638139 WDR63Q8IWG1 891 aa12.92□□□□□ -0.34
SMARCA2-265ENST00000638139 PCDHB15Q9Y5E8 787 aa12.92□□□□□ -0.34
SMARCA2-265ENST00000638139 ADGRB1O14514 1584 aa12.91□□□□□ -0.34
SMARCA2-265ENST00000638139 PMFBP1Q8TBY8 1022 aa12.91□□□□□ -0.34
SMARCA2-265ENST00000638139 C14orf93Q9H972 538 aaKnown RBP12.91□□□□□ -0.34
SMARCA2-265ENST00000638139 ZNF518AQ6AHZ1 1483 aa12.91□□□□□ -0.34
SMARCA2-265ENST00000638139 MTHFSP49914 203 aa12.9□□□□□ -0.34
SMARCA2-265ENST00000638139 AAMPQ13685 434 aa12.9□□□□□ -0.34
SMARCA2-265ENST00000638139 ANO8Q9HCE9 1232 aaPredicted RBP12.9□□□□□ -0.34
SMARCA2-265ENST00000638139 TMEM132EQ6IEE7 984 aa12.89□□□□□ -0.35
SMARCA2-265ENST00000638139 BCL2L13Q9BXK5 485 aa12.89□□□□□ -0.35
SMARCA2-265ENST00000638139 CCDC27Q2M243 656 aa12.89□□□□□ -0.35
SMARCA2-265ENST00000638139 PDZRN3Q9UPQ7 1066 aa12.88□□□□□ -0.35
SMARCA2-265ENST00000638139 BECN1Q14457 450 aa12.88□□□□□ -0.35
SMARCA2-265ENST00000638139 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
SMARCA2-265ENST00000638139 NPATQ14207 1427 aa12.87□□□□□ -0.35
SMARCA2-265ENST00000638139 ZMYM3Q14202 1370 aa12.87□□□□□ -0.35
SMARCA2-265ENST00000638139 ASXL2Q76L83 1435 aa12.86□□□□□ -0.35
SMARCA2-265ENST00000638139 RWDD1Q9H446 243 aaPredicted RBP12.85□□□□□ -0.35
SMARCA2-265ENST00000638139 MYH16Q9H6N6 1097 aa12.85□□□□□ -0.35
SMARCA2-265ENST00000638139 ADGRB2O60241 1585 aa12.85□□□□□ -0.35
SMARCA2-265ENST00000638139 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
SMARCA2-265ENST00000638139 GLI2P10070 1586 aa12.85□□□□□ -0.35
SMARCA2-265ENST00000638139 ARHGEF28Q8N1W1 1705 aaKnown RBP12.85□□□□□ -0.35
SMARCA2-265ENST00000638139 TULP4Q9NRJ4 1543 aa12.85□□□□□ -0.35
SMARCA2-265ENST00000638139 TBC1D32Q96NH3 1257 aa12.85□□□□□ -0.35
SMARCA2-265ENST00000638139 SLKQ9H2G2 1235 aaPredicted RBP12.85□□□□□ -0.35
SMARCA2-265ENST00000638139 RPGRIP1LQ68CZ1 1315 aa12.84□□□□□ -0.35
SMARCA2-265ENST00000638139 FRMPD1Q5SYB0 1578 aa12.84□□□□□ -0.35
SMARCA2-265ENST00000638139 U2AF1L5P0DN76 240 aaPredicted RBP12.84□□□□□ -0.35
SMARCA2-265ENST00000638139 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMARCA2-265ENST00000638139 ANKRD36BQ8N2N9 1353 aa12.84□□□□□ -0.35
SMARCA2-265ENST00000638139 MVPQ14764 893 aaKnown RBP12.84□□□□□ -0.35
SMARCA2-265ENST00000638139 ANTXR1Q9H6X2 564 aa12.84□□□□□ -0.35
SMARCA2-265ENST00000638139 PUS7Q96PZ0 661 aaKnown RBP12.83□□□□□ -0.36
SMARCA2-265ENST00000638139 UPF2Q9HAU5 1272 aaKnown RBP12.83□□□□□ -0.36
SMARCA2-265ENST00000638139 NSD2O96028 1365 aa12.83□□□□□ -0.36
SMARCA2-265ENST00000638139 EVC2Q86UK5 1308 aa12.83□□□□□ -0.36
SMARCA2-265ENST00000638139 GGT6Q6P531 493 aa12.83□□□□□ -0.36
SMARCA2-265ENST00000638139 HECW2Q9P2P5 1572 aa12.83□□□□□ -0.36
SMARCA2-265ENST00000638139 ZKSCAN2Q63HK3 967 aa12.82□□□□□ -0.36
SMARCA2-265ENST00000638139 POGKQ9P215 609 aa12.82□□□□□ -0.36
SMARCA2-265ENST00000638139 DZIP1LQ8IYY4 767 aaKnown RBP12.81□□□□□ -0.36
SMARCA2-265ENST00000638139 TSR2Q969E8 191 aaKnown RBP12.81□□□□□ -0.36
SMARCA2-265ENST00000638139 TBC1D2Q9BYX2 928 aa12.81□□□□□ -0.36
SMARCA2-265ENST00000638139 SIGLEC1Q9BZZ2 1709 aa12.81□□□□□ -0.36
SMARCA2-265ENST00000638139 CAMSAP1Q5T5Y3 1602 aa12.81□□□□□ -0.36
SMARCA2-265ENST00000638139 ABCC3O15438 1527 aa12.81□□□□□ -0.36
SMARCA2-265ENST00000638139 NUTM2DQ5VT03 806 aaPredicted RBP12.81□□□□□ -0.36
SMARCA2-265ENST00000638139 CABP2Q9NPB3 220 aa12.81□□□□□ -0.36
SMARCA2-265ENST00000638139 FTSJ3Q8IY81 847 aaKnown RBP12.8□□□□□ -0.36
SMARCA2-265ENST00000638139 POGZQ7Z3K3 1410 aa12.79□□□□□ -0.36
SMARCA2-265ENST00000638139 CT47B1P0C2W7 299 aaPredicted RBP12.79□□□□□ -0.36
SMARCA2-265ENST00000638139 EXOSC9Q06265 439 aaKnown RBP12.79□□□□□ -0.36
SMARCA2-265ENST00000638139 NEXMIFQ5QGS0 1516 aa12.79□□□□□ -0.36
SMARCA2-265ENST00000638139 CD109Q6YHK3 1445 aa12.79□□□□□ -0.36
SMARCA2-265ENST00000638139 MLH3Q9UHC1 1453 aa12.79□□□□□ -0.36
SMARCA2-265ENST00000638139 PIK3C2BO00750 1634 aa12.79□□□□□ -0.36
SMARCA2-265ENST00000638139 PLEKHF1Q96S99 279 aa12.78□□□□□ -0.36
SMARCA2-265ENST00000638139 SMC4Q9NTJ3 1288 aa12.78□□□□□ -0.36
SMARCA2-265ENST00000638139 VGFO15240 615 aaPredicted RBP12.77□□□□□ -0.36
SMARCA2-265ENST00000638139 TRIM27P14373 513 aa12.77□□□□□ -0.36
SMARCA2-265ENST00000638139 TMPOP42166 694 aaKnown RBP12.77□□□□□ -0.36
SMARCA2-265ENST00000638139 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.36
SMARCA2-265ENST00000638139 ABCC11Q96J66 1382 aa12.77□□□□□ -0.36
SMARCA2-265ENST00000638139 COL3A1P02461 1466 aaPredicted RBP12.77□□□□□ -0.36
SMARCA2-265ENST00000638139 U2SURPO15042 1029 aaKnown RBP12.77□□□□□ -0.37
SMARCA2-265ENST00000638139 SAFB2Q14151 953 aaKnown RBP eCLIP12.77□□□□□ -0.37
SMARCA2-265ENST00000638139 SSH1Q8WYL5 1049 aa12.77□□□□□ -0.37
SMARCA2-265ENST00000638139 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.77□□□□□ -0.37
SMARCA2-265ENST00000638139 A0A1W2PP64 1363 aa12.77□□□□□ -0.37
SMARCA2-265ENST00000638139 CFAP74Q9C0B2 1584 aa12.77□□□□□ -0.37
SMARCA2-265ENST00000638139 HDAC1Q13547 482 aaPredicted RBP12.76□□□□□ -0.37
SMARCA2-265ENST00000638139 GGNBP2Q9H3C7 697 aa12.75□□□□□ -0.37
SMARCA2-265ENST00000638139 ANKRD26Q9UPS8 1709 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms