RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 RGS12O14924 1447 aa27.24■■□□□ 1.95
CTSD-209ENST00000637158 ANKRD30BQ9BXX2 1392 aa27.24■■□□□ 1.95
CTSD-209ENST00000637158 TRPC5Q9UL62 973 aaPredicted RBP27.24■■□□□ 1.95
CTSD-209ENST00000637158 FOXD1Q16676 465 aa27.23■■□□□ 1.95
CTSD-209ENST00000637158 FNBP4Q8N3X1 1017 aaPredicted RBP27.23■■□□□ 1.95
CTSD-209ENST00000637158 LRPPRCP42704 1394 aaKnown RBP27.22■■□□□ 1.95
CTSD-209ENST00000637158 ADGRF5Q8IZF2 1346 aa27.22■■□□□ 1.95
CTSD-209ENST00000637158 ACIN1Q9UKV3 1341 aaKnown RBP27.22■■□□□ 1.95
CTSD-209ENST00000637158 CDC42BPGQ6DT37 1551 aa27.22■■□□□ 1.95
CTSD-209ENST00000637158 RGL3Q3MIN7 710 aa27.21■■□□□ 1.95
CTSD-209ENST00000637158 MPHOSPH9Q99550 1183 aa27.2■■□□□ 1.94
CTSD-209ENST00000637158 TECPR2O15040 1411 aa27.19■■□□□ 1.94
CTSD-209ENST00000637158 STK26Q9P289 416 aa27.18■■□□□ 1.94
CTSD-209ENST00000637158 ABCC11Q96J66 1382 aa27.18■■□□□ 1.94
CTSD-209ENST00000637158 SPATA31E1Q6ZUB1 1445 aa27.17■■□□□ 1.94
CTSD-209ENST00000637158 COL22A1Q8NFW1 1626 aaPredicted RBP27.17■■□□□ 1.94
CTSD-209ENST00000637158 FOXO3O43524 673 aa27.16■■□□□ 1.94
CTSD-209ENST00000637158 ATAD2Q6PL18 1390 aa27.15■■□□□ 1.94
CTSD-209ENST00000637158 WAPLQ7Z5K2 1190 aa27.15■■□□□ 1.94
CTSD-209ENST00000637158 MYOM2P54296 1465 aa27.13■■□□□ 1.93
CTSD-209ENST00000637158 PXDNQ92626 1479 aa27.13■■□□□ 1.93
CTSD-209ENST00000637158 SIRT1Q96EB6 747 aa27.12■■□□□ 1.93
CTSD-209ENST00000637158 ATRNO75882 1429 aa27.11■■□□□ 1.93
CTSD-209ENST00000637158 TMEM132EQ6IEE7 984 aa27.11■■□□□ 1.93
CTSD-209ENST00000637158 PIK3C2GO75747 1445 aa27.1■■□□□ 1.93
CTSD-209ENST00000637158 NUTM2FA1L443 756 aa27.09■■□□□ 1.93
CTSD-209ENST00000637158 XPCQ01831 940 aaPredicted RBP27.08■■□□□ 1.93
CTSD-209ENST00000637158 YTHDC2Q9H6S0 1430 aaKnown RBP27.07■■□□□ 1.92
CTSD-209ENST00000637158 IFT172Q9UG01 1749 aa27.07■■□□□ 1.92
CTSD-209ENST00000637158 KNDC1Q76NI1 1749 aa27.07■■□□□ 1.92
CTSD-209ENST00000637158 C14orf93Q9H972 538 aaKnown RBP27.05■■□□□ 1.92
CTSD-209ENST00000637158 PLEKHH1Q9ULM0 1364 aa27.05■■□□□ 1.92
CTSD-209ENST00000637158 BCL9LQ86UU0 1499 aa27.05■■□□□ 1.92
CTSD-209ENST00000637158 CCDC125Q86Z20 511 aa27.04■■□□□ 1.92
CTSD-209ENST00000637158 SPATA31A3Q5VYP0 1347 aa27.03■■□□□ 1.92
CTSD-209ENST00000637158 GJD4Q96KN9 370 aaPredicted RBP27.03■■□□□ 1.92
CTSD-209ENST00000637158 SRCAPQ6ZRS2 3230 aa27.03■■□□□ 1.92
CTSD-209ENST00000637158 DHX57Q6P158 1386 aaKnown RBP27.02■■□□□ 1.92
CTSD-209ENST00000637158 PSME1Q06323 249 aa27.01■■□□□ 1.91
CTSD-209ENST00000637158 KRT28Q7Z3Y7 464 aa27.01■■□□□ 1.91
CTSD-209ENST00000637158 EP400Q96L91 3159 aa27.01■■□□□ 1.91
CTSD-209ENST00000637158 KIF1AQ12756 1690 aa27.01■■□□□ 1.91
CTSD-209ENST00000637158 MARF1Q9Y4F3 1742 aaKnown RBP27■■□□□ 1.91
CTSD-209ENST00000637158 FMN2Q9NZ56 1722 aa26.99■■□□□ 1.91
CTSD-209ENST00000637158 UNC5CLQ8IV45 518 aa26.99■■□□□ 1.91
CTSD-209ENST00000637158 PHF8Q9UPP1 1060 aa26.97■■□□□ 1.91
CTSD-209ENST00000637158 NRXN1Q9ULB1 1477 aa26.96■■□□□ 1.91
CTSD-209ENST00000637158 CFAP70Q5T0N1 1121 aa26.96■■□□□ 1.91
CTSD-209ENST00000637158 HAP1P54257 671 aaPredicted RBP26.95■■□□□ 1.9
CTSD-209ENST00000637158 ZRANB1Q9UGI0 708 aa26.94■■□□□ 1.9
CTSD-209ENST00000637158 SLIT2O94813 1529 aa26.94■■□□□ 1.9
CTSD-209ENST00000637158 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.93■■□□□ 1.9
CTSD-209ENST00000637158 PRAM1Q96QH2 718 aa26.92■■□□□ 1.9
CTSD-209ENST00000637158 TNS3Q68CZ2 1445 aa26.91■■□□□ 1.9
CTSD-209ENST00000637158 POGKQ9P215 609 aa26.91■■□□□ 1.9
CTSD-209ENST00000637158 SBNO1A3KN83 1393 aa26.9■■□□□ 1.9
CTSD-209ENST00000637158 ARHGEF10O15013 1369 aa26.89■■□□□ 1.9
CTSD-209ENST00000637158 RALGAPBQ86X10 1494 aa26.88■■□□□ 1.89
CTSD-209ENST00000637158 USP32Q8NFA0 1604 aa26.87■■□□□ 1.89
CTSD-209ENST00000637158 DLC1Q96QB1 1528 aa26.86■■□□□ 1.89
CTSD-209ENST00000637158 SAFB2Q14151 953 aaKnown RBP eCLIP26.86■■□□□ 1.89
CTSD-209ENST00000637158 VPS72Q15906 364 aa26.86■■□□□ 1.89
CTSD-209ENST00000637158 ANKARQ7Z5J8 1434 aa26.85■■□□□ 1.89
CTSD-209ENST00000637158 LMOD2Q6P5Q4 547 aa26.85■■□□□ 1.89
CTSD-209ENST00000637158 STAC3Q96MF2 364 aa26.84■■□□□ 1.89
CTSD-209ENST00000637158 CABLES1Q8TDN4 633 aa26.83■■□□□ 1.89
CTSD-209ENST00000637158 GLI3P10071 1580 aa26.82■■□□□ 1.88
CTSD-209ENST00000637158 EIF3AQ14152 1382 aaKnown RBP26.82■■□□□ 1.88
CTSD-209ENST00000637158 RAB3GAP2Q9H2M9 1393 aa26.82■■□□□ 1.88
CTSD-209ENST00000637158 BLMP54132 1417 aaPredicted RBP26.82■■□□□ 1.88
CTSD-209ENST00000637158 RGPD8O14715 1765 aaPredicted RBP26.81■■□□□ 1.88
CTSD-209ENST00000637158 PMFBP1Q8TBY8 1022 aa26.81■■□□□ 1.88
CTSD-209ENST00000637158 ONECUT3O60422 494 aaPredicted RBP26.8■■□□□ 1.88
CTSD-209ENST00000637158 SEPT12Q8IYM1 358 aa26.8■■□□□ 1.88
CTSD-209ENST00000637158 CCDC9Q9Y3X0 531 aaKnown RBP26.8■■□□□ 1.88
CTSD-209ENST00000637158 SF3B2Q13435 895 aaKnown RBP26.79■■□□□ 1.88
CTSD-209ENST00000637158 TRAK1Q9UPV9 953 aa26.78■■□□□ 1.88
CTSD-209ENST00000637158 GPRASP1Q5JY77 1395 aa26.78■■□□□ 1.88
CTSD-209ENST00000637158 NWD2Q9ULI1 1742 aa26.77■■□□□ 1.88
CTSD-209ENST00000637158 ADGRB2O60241 1585 aa26.77■■□□□ 1.88
CTSD-209ENST00000637158 PLEKHG5O94827 1062 aa26.77■■□□□ 1.88
CTSD-209ENST00000637158 ADGRB1O14514 1584 aa26.75■■□□□ 1.87
CTSD-209ENST00000637158 FAM83GA6ND36 823 aa26.75■■□□□ 1.87
CTSD-209ENST00000637158 DCAF11Q8TEB1 546 aa26.75■■□□□ 1.87
CTSD-209ENST00000637158 KDM2AQ9Y2K7 1162 aa26.74■■□□□ 1.87
CTSD-209ENST00000637158 WASLO00401 505 aaPredicted RBP26.73■■□□□ 1.87
CTSD-209ENST00000637158 KRT27Q7Z3Y8 459 aa26.73■■□□□ 1.87
CTSD-209ENST00000637158 HIRIP3Q9BW71 556 aaPredicted RBP26.73■■□□□ 1.87
CTSD-209ENST00000637158 PLCH1Q4KWH8 1693 aa26.72■■□□□ 1.87
CTSD-209ENST00000637158 MINK1Q8N4C8 1332 aaPredicted RBP26.71■■□□□ 1.87
CTSD-209ENST00000637158 HRCP23327 699 aa26.71■■□□□ 1.87
CTSD-209ENST00000637158 NGDNQ8NEJ9 315 aaKnown RBP26.69■■□□□ 1.86
CTSD-209ENST00000637158 ABCA3Q99758 1704 aa26.69■■□□□ 1.86
CTSD-209ENST00000637158 BTG4Q9NY30 223 aa26.69■■□□□ 1.86
CTSD-209ENST00000637158 TULP4Q9NRJ4 1543 aa26.69■■□□□ 1.86
CTSD-209ENST00000637158 BRWD3Q6RI45 1802 aa26.68■■□□□ 1.86
CTSD-209ENST00000637158 A0A0G2JS52 829 aa26.67■■□□□ 1.86
CTSD-209ENST00000637158 MYT1Q01538 1121 aa26.67■■□□□ 1.86
CTSD-209ENST00000637158 DEFB132Q7Z7B7 95 aa26.67■■□□□ 1.86
CTSD-209ENST00000637158 PRR36Q9H6K5 1346 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms