RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 KDM5AP29375 1690 aaKnown RBP10.7□□□□□ -0.7
CHD2-226ENST00000636881 PTMSP20962 102 aa10.7□□□□□ -0.7
CHD2-226ENST00000636881 ZKSCAN2Q63HK3 967 aa10.7□□□□□ -0.7
CHD2-226ENST00000636881 TCP11L2Q8N4U5 519 aa10.7□□□□□ -0.7
CHD2-226ENST00000636881 TNPO1Q92973 898 aaKnown RBP10.7□□□□□ -0.7
CHD2-226ENST00000636881 MYOM1P52179 1685 aa10.7□□□□□ -0.7
CHD2-226ENST00000636881 SCAPERQ9BY12 1400 aa10.7□□□□□ -0.7
CHD2-226ENST00000636881 TNNT2P45379 298 aaPredicted RBP10.7□□□□□ -0.7
CHD2-226ENST00000636881 MADDQ8WXG6 1647 aa10.69□□□□□ -0.7
CHD2-226ENST00000636881 SYCP2Q9BX26 1530 aa10.69□□□□□ -0.7
CHD2-226ENST00000636881 RTEL1-TNFRSF6BF6WH68 1400 aa10.69□□□□□ -0.7
CHD2-226ENST00000636881 KIAA1211Q6ZU35 1233 aa10.69□□□□□ -0.7
CHD2-226ENST00000636881 GAS2L3Q86XJ1 694 aa10.69□□□□□ -0.7
CHD2-226ENST00000636881 WDR63Q8IWG1 891 aa10.69□□□□□ -0.7
CHD2-226ENST00000636881 DZIP1LQ8IYY4 767 aaKnown RBP10.69□□□□□ -0.7
CHD2-226ENST00000636881 ZNF692Q9BU19 519 aaPredicted RBP10.69□□□□□ -0.7
CHD2-226ENST00000636881 PDCL3Q9H2J4 239 aa10.69□□□□□ -0.7
CHD2-226ENST00000636881 DNAJC5BQ9UF47 199 aa10.69□□□□□ -0.7
CHD2-226ENST00000636881 MORC1Q86VD1 984 aa10.68□□□□□ -0.7
CHD2-226ENST00000636881 ATP10AO60312 1499 aa10.68□□□□□ -0.7
CHD2-226ENST00000636881 CDC42BPBQ9Y5S2 1711 aa10.68□□□□□ -0.7
CHD2-226ENST00000636881 POLR3AO14802 1390 aaPredicted RBP10.68□□□□□ -0.7
CHD2-226ENST00000636881 CIZ1Q9ULV3 898 aaPredicted RBP10.68□□□□□ -0.7
CHD2-226ENST00000636881 MSNP26038 577 aaKnown RBP10.68□□□□□ -0.7
CHD2-226ENST00000636881 CCDC173Q0VFZ6 552 aa10.68□□□□□ -0.7
CHD2-226ENST00000636881 GOLGA6L22H0YM25 854 aa10.67□□□□□ -0.7
CHD2-226ENST00000636881 SLC24A1O60721 1099 aa10.67□□□□□ -0.7
CHD2-226ENST00000636881 PREX2Q70Z35 1606 aa10.67□□□□□ -0.7
CHD2-226ENST00000636881 FOXD4L1Q9NU39 408 aa10.67□□□□□ -0.7
CHD2-226ENST00000636881 MAST1Q9Y2H9 1570 aa10.67□□□□□ -0.7
CHD2-226ENST00000636881 ARHGAP5Q13017 1502 aa10.67□□□□□ -0.7
CHD2-226ENST00000636881 CARD14Q9BXL6 1004 aa10.67□□□□□ -0.7
CHD2-226ENST00000636881 ITPRIPQ8IWB1 547 aa10.66□□□□□ -0.7
CHD2-226ENST00000636881 NASPP49321 788 aaPredicted RBP10.66□□□□□ -0.7
CHD2-226ENST00000636881 SNX21Q969T3 373 aa10.66□□□□□ -0.7
CHD2-226ENST00000636881 SMC5Q8IY18 1101 aa10.66□□□□□ -0.7
CHD2-226ENST00000636881 SMC4Q9NTJ3 1288 aa10.66□□□□□ -0.7
CHD2-226ENST00000636881 RAB3GAP1Q15042 981 aa10.65□□□□□ -0.7
CHD2-226ENST00000636881 ZSCAN30Q86W11 494 aa10.65□□□□□ -0.7
CHD2-226ENST00000636881 STAC3Q96MF2 364 aa10.65□□□□□ -0.7
CHD2-226ENST00000636881 CEP152O94986 1710 aa10.65□□□□□ -0.7
CHD2-226ENST00000636881 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.65□□□□□ -0.7
CHD2-226ENST00000636881 CFAP53Q96M91 514 aa10.65□□□□□ -0.7
CHD2-226ENST00000636881 DDX19BQ9UMR2 479 aa10.65□□□□□ -0.7
CHD2-226ENST00000636881 NCOA3Q9Y6Q9 1424 aa10.65□□□□□ -0.7
CHD2-226ENST00000636881 DUOX2Q9NRD8 1548 aa10.64□□□□□ -0.71
CHD2-226ENST00000636881 HDAC1Q13547 482 aaPredicted RBP10.64□□□□□ -0.71
CHD2-226ENST00000636881 TTC37Q6PGP7 1564 aa10.64□□□□□ -0.71
CHD2-226ENST00000636881 SPHKAPQ2M3C7 1700 aa10.64□□□□□ -0.71
CHD2-226ENST00000636881 DDIT3P35638 169 aa10.64□□□□□ -0.71
CHD2-226ENST00000636881 RBM25P49756 843 aaKnown RBP10.64□□□□□ -0.71
CHD2-226ENST00000636881 DDX49Q9Y6V7 483 aaKnown RBP10.63□□□□□ -0.71
CHD2-226ENST00000636881 RBM10P98175 930 aaKnown RBP10.63□□□□□ -0.71
CHD2-226ENST00000636881 OFD1O75665 1012 aa10.62□□□□□ -0.71
CHD2-226ENST00000636881 PPP1R9BQ96SB3 815 aa10.62□□□□□ -0.71
CHD2-226ENST00000636881 ERVK-7P63135 1459 aa10.62□□□□□ -0.71
CHD2-226ENST00000636881 CCDC27Q2M243 656 aa10.62□□□□□ -0.71
CHD2-226ENST00000636881 CFAP70Q5T0N1 1121 aa10.62□□□□□ -0.71
CHD2-226ENST00000636881 LNPKQ9C0E8 428 aa10.62□□□□□ -0.71
CHD2-226ENST00000636881 NSD3Q9BZ95 1437 aa10.62□□□□□ -0.71
CHD2-226ENST00000636881 NCLP19338 710 aaKnown RBP10.62□□□□□ -0.71
CHD2-226ENST00000636881 PHF23Q9BUL5 403 aaPredicted RBP10.62□□□□□ -0.71
CHD2-226ENST00000636881 U2AF1L5P0DN76 240 aaPredicted RBP10.61□□□□□ -0.71
CHD2-226ENST00000636881 U2AF1Q01081 240 aaKnown RBP eCLIP10.61□□□□□ -0.712e-7■□□□□ 10.6
CHD2-226ENST00000636881 TSR2Q969E8 191 aaKnown RBP10.61□□□□□ -0.71
CHD2-226ENST00000636881 R3HCC1Q9Y3T6 440 aaKnown RBP10.61□□□□□ -0.71
CHD2-226ENST00000636881 IQSEC2Q5JU85 1478 aa10.61□□□□□ -0.71
CHD2-226ENST00000636881 K7ELQ4 463 aaPredicted RBP10.61□□□□□ -0.71
CHD2-226ENST00000636881 TRIM27P14373 513 aa10.61□□□□□ -0.71
CHD2-226ENST00000636881 SSFA2P28290 1259 aa10.61□□□□□ -0.71
CHD2-226ENST00000636881 SHPRHQ149N8 1683 aa10.61□□□□□ -0.71
CHD2-226ENST00000636881 MTHFSP49914 203 aa10.61□□□□□ -0.71
CHD2-226ENST00000636881 EXOSC9Q06265 439 aaKnown RBP10.61□□□□□ -0.71
CHD2-226ENST00000636881 CT47B1P0C2W7 299 aaPredicted RBP10.6□□□□□ -0.71
CHD2-226ENST00000636881 FAM13BQ9NYF5 915 aa10.6□□□□□ -0.71
CHD2-226ENST00000636881 ERCC6Q03468 1493 aa10.6□□□□□ -0.71
CHD2-226ENST00000636881 KANK1Q14678 1352 aa10.6□□□□□ -0.71
CHD2-226ENST00000636881 ATF7IPQ6VMQ6 1270 aa10.6□□□□□ -0.71
CHD2-226ENST00000636881 CALD1Q05682 793 aaKnown RBP10.59□□□□□ -0.71
CHD2-226ENST00000636881 MAP7D2Q96T17 732 aa10.59□□□□□ -0.71
CHD2-226ENST00000636881 KLHL40Q2TBA0 621 aa10.59□□□□□ -0.71
CHD2-226ENST00000636881 TMEM57Q8N5G2 664 aa10.59□□□□□ -0.71
CHD2-226ENST00000636881 SSH1Q8WYL5 1049 aa10.59□□□□□ -0.71
CHD2-226ENST00000636881 NOB1Q9ULX3 412 aaKnown RBP10.59□□□□□ -0.71
CHD2-226ENST00000636881 TRPM2O94759 1503 aa10.58□□□□□ -0.72
CHD2-226ENST00000636881 TERF1P54274 439 aa10.58□□□□□ -0.72
CHD2-226ENST00000636881 NUCB1Q02818 461 aa10.58□□□□□ -0.72
CHD2-226ENST00000636881 CHD1LQ86WJ1 897 aa10.58□□□□□ -0.72
CHD2-226ENST00000636881 BAG4O95429 457 aaKnown RBP10.58□□□□□ -0.72
CHD2-226ENST00000636881 CLTCL1P53675 1640 aa10.57□□□□□ -0.72
CHD2-226ENST00000636881 IPO8O15397 1037 aaKnown RBP10.57□□□□□ -0.72
CHD2-226ENST00000636881 CD2BP2O95400 341 aaKnown RBP10.57□□□□□ -0.72
CHD2-226ENST00000636881 RIPK4P57078 832 aa10.57□□□□□ -0.72
CHD2-226ENST00000636881 MCTP1Q6DN14 999 aa10.57□□□□□ -0.72
CHD2-226ENST00000636881 GAS2L2Q8NHY3 880 aa10.57□□□□□ -0.72
CHD2-226ENST00000636881 SLC12A5Q9H2X9 1139 aa10.57□□□□□ -0.72
CHD2-226ENST00000636881 KIAA1210Q9ULL0 1709 aa10.57□□□□□ -0.72
CHD2-226ENST00000636881 BMP2KLQ5H9B9 411 aa10.57□□□□□ -0.72
CHD2-226ENST00000636881 ANKRD45Q5TZF3 282 aa10.57□□□□□ -0.72
CHD2-226ENST00000636881 CAVIN1Q6NZI2 390 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms