RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 CDC42BPGQ6DT37 1551 aa27.73■■■□□ 2.03
CLN6-213ENST00000636212 WAPLQ7Z5K2 1190 aa27.73■■■□□ 2.03
CLN6-213ENST00000636212 NUTM2BA6NNL0 878 aaPredicted RBP27.71■■■□□ 2.03
CLN6-213ENST00000636212 NUTM2EB1AL46 878 aaPredicted RBP27.71■■■□□ 2.03
CLN6-213ENST00000636212 CFAP70Q5T0N1 1121 aa27.71■■■□□ 2.03
CLN6-213ENST00000636212 NUTM2AQ8IVF1 878 aaPredicted RBP27.71■■■□□ 2.03
CLN6-213ENST00000636212 DDX17Q92841 729 aaKnown RBP27.71■■■□□ 2.03
CLN6-213ENST00000636212 ORAI2Q96SN7 254 aa27.71■■■□□ 2.03
CLN6-213ENST00000636212 SIRT1Q96EB6 747 aa27.7■■■□□ 2.02
CLN6-213ENST00000636212 LRP6O75581 1613 aa27.7■■■□□ 2.02
CLN6-213ENST00000636212 POTEAQ6S8J7 498 aa27.69■■■□□ 2.02
CLN6-213ENST00000636212 STAC3Q96MF2 364 aa27.69■■■□□ 2.02
CLN6-213ENST00000636212 ESCO1Q5FWF5 840 aa27.68■■■□□ 2.02
CLN6-213ENST00000636212 DCAF11Q8TEB1 546 aa27.68■■■□□ 2.02
CLN6-213ENST00000636212 KDM2AQ9Y2K7 1162 aa27.68■■■□□ 2.02
CLN6-213ENST00000636212 ZNF772Q68DY9 489 aaPredicted RBP27.67■■■□□ 2.02
CLN6-213ENST00000636212 PLEKHH1Q9ULM0 1364 aa27.64■■■□□ 2.02
CLN6-213ENST00000636212 NPHP3Q7Z494 1330 aa27.64■■■□□ 2.01
CLN6-213ENST00000636212 PNPLA6Q8IY17 1366 aa27.63■■■□□ 2.01
CLN6-213ENST00000636212 SOS2Q07890 1332 aaPredicted RBP27.63■■■□□ 2.01
CLN6-213ENST00000636212 NUTM2FA1L443 756 aa27.61■■■□□ 2.01
CLN6-213ENST00000636212 POGKQ9P215 609 aa27.61■■■□□ 2.01
CLN6-213ENST00000636212 PRAM1Q96QH2 718 aa27.59■■■□□ 2.01
CLN6-213ENST00000636212 DLC1Q96QB1 1528 aa27.57■■■□□ 2
CLN6-213ENST00000636212 FMN2Q9NZ56 1722 aa27.56■■■□□ 2
CLN6-213ENST00000636212 FOXO3O43524 673 aa27.56■■■□□ 2
CLN6-213ENST00000636212 SAFB2Q14151 953 aaKnown RBP eCLIP27.56■■■□□ 2
CLN6-213ENST00000636212 C8orf37Q96NL8 207 aa27.54■■■□□ 2
CLN6-213ENST00000636212 TRAK1Q9UPV9 953 aa27.54■■■□□ 2
CLN6-213ENST00000636212 AFF2P51816 1311 aa27.53■■■□□ 2
CLN6-213ENST00000636212 ADGRB1O14514 1584 aa27.52■■■□□ 2
CLN6-213ENST00000636212 KIF1AQ12756 1690 aa27.52■■■□□ 2
CLN6-213ENST00000636212 ADAMTS2O95450 1211 aa27.5■■□□□ 1.99
CLN6-213ENST00000636212 PXDNQ92626 1479 aa27.5■■□□□ 1.99
CLN6-213ENST00000636212 RXRBP28702 533 aa27.49■■□□□ 1.99
CLN6-213ENST00000636212 XPCQ01831 940 aaPredicted RBP27.49■■□□□ 1.99
CLN6-213ENST00000636212 NGLY1Q96IV0 654 aa27.49■■□□□ 1.99
CLN6-213ENST00000636212 PHF8Q9UPP1 1060 aa27.47■■□□□ 1.99
CLN6-213ENST00000636212 EIF3AQ14152 1382 aaKnown RBP27.46■■□□□ 1.99
CLN6-213ENST00000636212 COL22A1Q8NFW1 1626 aaPredicted RBP27.45■■□□□ 1.99
CLN6-213ENST00000636212 PSME1Q06323 249 aa27.45■■□□□ 1.98
CLN6-213ENST00000636212 KRT28Q7Z3Y7 464 aa27.44■■□□□ 1.98
CLN6-213ENST00000636212 ADGRB2O60241 1585 aa27.43■■□□□ 1.98
CLN6-213ENST00000636212 ANKARQ7Z5J8 1434 aa27.43■■□□□ 1.98
CLN6-213ENST00000636212 MINK1Q8N4C8 1332 aaPredicted RBP27.42■■□□□ 1.98
CLN6-213ENST00000636212 HIRIP3Q9BW71 556 aaPredicted RBP27.42■■□□□ 1.98
CLN6-213ENST00000636212 QTRT2Q9H974 415 aaKnown RBP27.42■■□□□ 1.98
CLN6-213ENST00000636212 RGPD8O14715 1765 aaPredicted RBP27.4■■□□□ 1.98
CLN6-213ENST00000636212 SPATA31A3Q5VYP0 1347 aa27.4■■□□□ 1.98
CLN6-213ENST00000636212 USP21Q9UK80 565 aa27.38■■□□□ 1.97
CLN6-213ENST00000636212 WASLO00401 505 aaPredicted RBP27.37■■□□□ 1.97
CLN6-213ENST00000636212 RBM6P78332 1123 aaKnown RBP27.37■■□□□ 1.97
CLN6-213ENST00000636212 KIAA1210Q9ULL0 1709 aa27.37■■□□□ 1.97
CLN6-213ENST00000636212 CDK12Q9NYV4 1490 aaPredicted RBP27.37■■□□□ 1.97
CLN6-213ENST00000636212 HAP1P54257 671 aaPredicted RBP27.35■■□□□ 1.97
CLN6-213ENST00000636212 PMFBP1Q8TBY8 1022 aa27.35■■□□□ 1.97
CLN6-213ENST00000636212 TNS3Q68CZ2 1445 aa27.34■■□□□ 1.97
CLN6-213ENST00000636212 ARHGEF28Q8N1W1 1705 aaKnown RBP27.34■■□□□ 1.97
CLN6-213ENST00000636212 TULP4Q9NRJ4 1543 aa27.34■■□□□ 1.97
CLN6-213ENST00000636212 LMOD2Q6P5Q4 547 aa27.33■■□□□ 1.97
CLN6-213ENST00000636212 FNBP4Q8N3X1 1017 aaPredicted RBP27.33■■□□□ 1.97
CLN6-213ENST00000636212 TRPC5Q9UL62 973 aaPredicted RBP27.33■■□□□ 1.97
CLN6-213ENST00000636212 SBNO1A3KN83 1393 aa27.33■■□□□ 1.97
CLN6-213ENST00000636212 USP32Q8NFA0 1604 aa27.32■■□□□ 1.96
CLN6-213ENST00000636212 GPRASP1Q5JY77 1395 aa27.32■■□□□ 1.96
CLN6-213ENST00000636212 ARHGEF10O15013 1369 aa27.31■■□□□ 1.96
CLN6-213ENST00000636212 MARF1Q9Y4F3 1742 aaKnown RBP27.3■■□□□ 1.96
CLN6-213ENST00000636212 NEUROD1Q13562 356 aa27.28■■□□□ 1.96
CLN6-213ENST00000636212 NGDNQ8NEJ9 315 aaKnown RBP27.28■■□□□ 1.96
CLN6-213ENST00000636212 L3MBTL2Q969R5 705 aa27.27■■□□□ 1.96
CLN6-213ENST00000636212 PRR36Q9H6K5 1346 aa27.26■■□□□ 1.95
CLN6-213ENST00000636212 NBPF1Q3BBV0 1214 aa27.26■■□□□ 1.95
CLN6-213ENST00000636212 SIN3AQ96ST3 1273 aa27.26■■□□□ 1.95
CLN6-213ENST00000636212 PLEKHG5O94827 1062 aa27.25■■□□□ 1.95
CLN6-213ENST00000636212 NUDT16Q96DE0 195 aaKnown RBP27.24■■□□□ 1.95
CLN6-213ENST00000636212 ITSN1Q15811 1721 aa27.24■■□□□ 1.95
CLN6-213ENST00000636212 CDK19Q9BWU1 502 aa27.23■■□□□ 1.95
CLN6-213ENST00000636212 RGS12O14924 1447 aa27.23■■□□□ 1.95
CLN6-213ENST00000636212 ATRNO75882 1429 aa27.22■■□□□ 1.95
CLN6-213ENST00000636212 CENPJQ9HC77 1338 aaPredicted RBP27.2■■□□□ 1.95
CLN6-213ENST00000636212 PAK3O75914 559 aaPredicted RBP27.2■■□□□ 1.94
CLN6-213ENST00000636212 CABLES1Q8TDN4 633 aa27.2■■□□□ 1.94
CLN6-213ENST00000636212 ATP7BP35670 1465 aa27.19■■□□□ 1.94
CLN6-213ENST00000636212 BCL9LQ86UU0 1499 aa27.19■■□□□ 1.94
CLN6-213ENST00000636212 UPF1Q92900 1129 aaKnown RBP eCLIP27.19■■□□□ 1.94
CLN6-213ENST00000636212 UNC5CLQ8IV45 518 aa27.18■■□□□ 1.94
CLN6-213ENST00000636212 TRIM26Q12899 539 aaPredicted RBP27.17■■□□□ 1.94
CLN6-213ENST00000636212 TRPM3Q9HCF6 1732 aaPredicted RBP27.16■■□□□ 1.94
CLN6-213ENST00000636212 CCDC61Q9Y6R9 512 aa27.16■■□□□ 1.94
CLN6-213ENST00000636212 SRPK2P78362 688 aaKnown RBP27.15■■□□□ 1.94
CLN6-213ENST00000636212 GJD4Q96KN9 370 aaPredicted RBP27.15■■□□□ 1.94
CLN6-213ENST00000636212 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.15■■□□□ 1.94
CLN6-213ENST00000636212 SLIT2O94813 1529 aa27.15■■□□□ 1.94
CLN6-213ENST00000636212 ABCA3Q99758 1704 aa27.13■■□□□ 1.93
CLN6-213ENST00000636212 ROCK2O75116 1388 aaKnown RBP27.12■■□□□ 1.93
CLN6-213ENST00000636212 ALS2Q96Q42 1657 aa27.12■■□□□ 1.93
CLN6-213ENST00000636212 ATAD2Q6PL18 1390 aa27.11■■□□□ 1.93
CLN6-213ENST00000636212 TRPM1Q7Z4N2 1603 aa27.11■■□□□ 1.93
CLN6-213ENST00000636212 ACEP12821 1306 aa27.1■■□□□ 1.93
CLN6-213ENST00000636212 QRICH2Q9H0J4 1663 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms