RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 E9PSI1 815 aa11.87□□□□□ -0.51
SPTAN1-228ENST00000635853 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPTAN1-228ENST00000635853 ANKRD20A12PQ8NF67 263 aa11.87□□□□□ -0.51
SPTAN1-228ENST00000635853 PPP1R1BQ9UD71 204 aaPredicted RBP11.87□□□□□ -0.51
SPTAN1-228ENST00000635853 FOXD1Q16676 465 aa11.87□□□□□ -0.51
SPTAN1-228ENST00000635853 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
SPTAN1-228ENST00000635853 CLUAP1Q96AJ1 413 aa11.87□□□□□ -0.51
SPTAN1-228ENST00000635853 COG3Q96JB2 828 aa11.87□□□□□ -0.51
SPTAN1-228ENST00000635853 SF3B2Q13435 895 aaKnown RBP11.87□□□□□ -0.51
SPTAN1-228ENST00000635853 RAPGEF2Q9Y4G8 1499 aa11.87□□□□□ -0.51
SPTAN1-228ENST00000635853 EIF2S2P20042 333 aaKnown RBP11.86□□□□□ -0.51
SPTAN1-228ENST00000635853 IPO7O95373 1038 aaKnown RBP11.86□□□□□ -0.51
SPTAN1-228ENST00000635853 XPCQ01831 940 aaPredicted RBP11.86□□□□□ -0.51
SPTAN1-228ENST00000635853 RRP12Q5JTH9 1297 aaKnown RBP11.86□□□□□ -0.51
SPTAN1-228ENST00000635853 IFT57Q9NWB7 429 aa11.86□□□□□ -0.51
SPTAN1-228ENST00000635853 BECN2A8MW95 431 aa11.86□□□□□ -0.51
SPTAN1-228ENST00000635853 MBD3O95983 291 aa11.86□□□□□ -0.51
SPTAN1-228ENST00000635853 NUP155O75694 1391 aa11.85□□□□□ -0.51
SPTAN1-228ENST00000635853 PRIMPOLQ96LW4 560 aa11.85□□□□□ -0.51
SPTAN1-228ENST00000635853 FYB1O15117 783 aa11.85□□□□□ -0.51
SPTAN1-228ENST00000635853 IPO4Q8TEX9 1081 aaKnown RBP11.85□□□□□ -0.51
SPTAN1-228ENST00000635853 C9orf78Q9NZ63 289 aaPredicted RBP11.85□□□□□ -0.51
SPTAN1-228ENST00000635853 ERICH4A6NGS2 130 aa11.85□□□□□ -0.51
SPTAN1-228ENST00000635853 IKQ13123 557 aaPredicted RBP11.84□□□□□ -0.51
SPTAN1-228ENST00000635853 PSME1Q06323 249 aa11.84□□□□□ -0.51
SPTAN1-228ENST00000635853 MROH2BQ7Z745 1585 aa11.84□□□□□ -0.51
SPTAN1-228ENST00000635853 CPLX1O14810 134 aa11.84□□□□□ -0.51
SPTAN1-228ENST00000635853 TRDNQ13061 729 aa11.84□□□□□ -0.51
SPTAN1-228ENST00000635853 AK7Q96M32 723 aa11.84□□□□□ -0.51
SPTAN1-228ENST00000635853 DEF6Q9H4E7 631 aa11.84□□□□□ -0.51
SPTAN1-228ENST00000635853 ZFYVE27Q5T4F4 411 aa11.84□□□□□ -0.51
SPTAN1-228ENST00000635853 HOOK1Q9UJC3 728 aaKnown RBP11.83□□□□□ -0.51
SPTAN1-228ENST00000635853 COG6Q9Y2V7 657 aa11.83□□□□□ -0.51
SPTAN1-228ENST00000635853 ANKRD30AQ9BXX3 1397 aa11.83□□□□□ -0.52
SPTAN1-228ENST00000635853 ANO2Q9NQ90 1003 aa11.83□□□□□ -0.52
SPTAN1-228ENST00000635853 ATP6V1DQ9Y5K8 247 aa11.83□□□□□ -0.52
SPTAN1-228ENST00000635853 UACAQ9BZF9 1416 aa11.83□□□□□ -0.52
SPTAN1-228ENST00000635853 RUSC2Q8N2Y8 1516 aa11.83□□□□□ -0.52
SPTAN1-228ENST00000635853 CECR2Q9BXF3 1484 aa11.83□□□□□ -0.52
SPTAN1-228ENST00000635853 NAP1L1P55209 391 aaKnown RBP11.83□□□□□ -0.52
SPTAN1-228ENST00000635853 LEKR1Q6ZMV7 388 aa11.83□□□□□ -0.52
SPTAN1-228ENST00000635853 CCDC27Q2M243 656 aa11.83□□□□□ -0.52
SPTAN1-228ENST00000635853 CCDC184Q52MB2 194 aa11.83□□□□□ -0.52
SPTAN1-228ENST00000635853 PANK2Q9BZ23 570 aa11.82□□□□□ -0.52
SPTAN1-228ENST00000635853 TRAK1Q9UPV9 953 aa11.82□□□□□ -0.52
SPTAN1-228ENST00000635853 USP47Q96K76 1375 aa11.82□□□□□ -0.52
SPTAN1-228ENST00000635853 IFIT2P09913 472 aaKnown RBP11.82□□□□□ -0.52
SPTAN1-228ENST00000635853 PLCD3Q8N3E9 789 aa11.82□□□□□ -0.52
SPTAN1-228ENST00000635853 RNF214Q8ND24 703 aa11.82□□□□□ -0.52
SPTAN1-228ENST00000635853 CUX2O14529 1486 aa11.81□□□□□ -0.52
SPTAN1-228ENST00000635853 CARMIL1Q5VZK9 1371 aa11.81□□□□□ -0.52
SPTAN1-228ENST00000635853 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.81□□□□□ -0.52
SPTAN1-228ENST00000635853 DDX58O95786 925 aaKnown RBP11.81□□□□□ -0.52
SPTAN1-228ENST00000635853 EPS15P42566 896 aa11.81□□□□□ -0.52
SPTAN1-228ENST00000635853 HS1BP3Q53T59 392 aa11.81□□□□□ -0.52
SPTAN1-228ENST00000635853 HSP90AB2PQ58FF8 381 aa11.81□□□□□ -0.52
SPTAN1-228ENST00000635853 UTP14CQ5TAP6 766 aaKnown RBP11.81□□□□□ -0.52
SPTAN1-228ENST00000635853 RUFY2Q8WXA3 655 aa11.81□□□□□ -0.52
SPTAN1-228ENST00000635853 FOXD4L6Q3SYB3 417 aaPredicted RBP11.81□□□□□ -0.52
SPTAN1-228ENST00000635853 FOXD4L3Q6VB84 417 aaPredicted RBP11.81□□□□□ -0.52
SPTAN1-228ENST00000635853 NINLQ9Y2I6 1382 aa11.81□□□□□ -0.52
SPTAN1-228ENST00000635853 RNF20Q5VTR2 975 aa11.81□□□□□ -0.52
SPTAN1-228ENST00000635853 ATF3P18847 181 aa11.8□□□□□ -0.52
SPTAN1-228ENST00000635853 CCDC112Q8NEF3 446 aa11.8□□□□□ -0.52
SPTAN1-228ENST00000635853 WIZO95785 1651 aa11.8□□□□□ -0.52
SPTAN1-228ENST00000635853 TOP2AP11388 1531 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-228ENST00000635853 ELL2O00472 640 aaPredicted RBP11.8□□□□□ -0.52
SPTAN1-228ENST00000635853 NECTIN2Q92692 538 aa11.8□□□□□ -0.52
SPTAN1-228ENST00000635853 HNRNPMP52272 730 aaKnown RBP eCLIP11.8□□□□□ -0.524e-6■■■■□ 23.6
SPTAN1-228ENST00000635853 MTMR7Q9Y216 660 aa11.8□□□□□ -0.52
SPTAN1-228ENST00000635853 PRPF40AO75400 957 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-228ENST00000635853 RDXP35241 583 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-228ENST00000635853 RRP7AQ9Y3A4 280 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-228ENST00000635853 ACBD3Q9H3P7 528 aa11.79□□□□□ -0.52
SPTAN1-228ENST00000635853 ANKRD45Q5TZF3 282 aa11.78□□□□□ -0.52
SPTAN1-228ENST00000635853 PNISRQ8TF01 805 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-228ENST00000635853 SPDYE4A6NLX3 237 aa11.78□□□□□ -0.52
SPTAN1-228ENST00000635853 GTF2A1P52655 376 aaPredicted RBP11.78□□□□□ -0.52
SPTAN1-228ENST00000635853 MNS1Q8NEH6 495 aa11.78□□□□□ -0.52
SPTAN1-228ENST00000635853 SMARCA2P51531 1590 aa11.78□□□□□ -0.52
SPTAN1-228ENST00000635853 DMTNQ08495 405 aa11.78□□□□□ -0.52
SPTAN1-228ENST00000635853 G3BP1Q13283 466 aaKnown RBP eCLIP11.78□□□□□ -0.522e-7■■■□□ 18.2
SPTAN1-228ENST00000635853 ZKSCAN1P17029 563 aaPredicted RBP11.78□□□□□ -0.52
SPTAN1-228ENST00000635853 USP8P40818 1118 aa11.77□□□□□ -0.53
SPTAN1-228ENST00000635853 ZKSCAN2Q63HK3 967 aa11.77□□□□□ -0.53
SPTAN1-228ENST00000635853 BRMS1Q9HCU9 246 aa11.77□□□□□ -0.53
SPTAN1-228ENST00000635853 K7ELQ4 463 aaPredicted RBP11.77□□□□□ -0.53
SPTAN1-228ENST00000635853 CDCA7LQ96GN5 454 aa11.77□□□□□ -0.53
SPTAN1-228ENST00000635853 CDR1P51861 262 aa11.77□□□□□ -0.53
SPTAN1-228ENST00000635853 FOSBP53539 338 aa11.77□□□□□ -0.53
SPTAN1-228ENST00000635853 TBC1D2Q9BYX2 928 aa11.77□□□□□ -0.53
SPTAN1-228ENST00000635853 SAFBQ15424 915 aaKnown RBP eCLIP11.76□□□□□ -0.53
SPTAN1-228ENST00000635853 AXDND1Q5T1B0 1012 aaPredicted RBP11.76□□□□□ -0.53
SPTAN1-228ENST00000635853 RUFY1Q96T51 708 aa11.76□□□□□ -0.53
SPTAN1-228ENST00000635853 PDZRN3Q9UPQ7 1066 aa11.76□□□□□ -0.53
SPTAN1-228ENST00000635853 PDE3AQ14432 1141 aa11.75□□□□□ -0.53
SPTAN1-228ENST00000635853 RAPGEF4Q8WZA2 1011 aa11.75□□□□□ -0.53
SPTAN1-228ENST00000635853 DDX19BQ9UMR2 479 aa11.75□□□□□ -0.53
SPTAN1-228ENST00000635853 HOMER1Q86YM7 354 aa11.74□□□□□ -0.53
SPTAN1-228ENST00000635853 BICD2Q8TD16 824 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms