RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 ANP32AP39687 249 aaKnown RBP10.62□□□□□ -0.71
GPC3-204ENST00000631057 PIK3C2BO00750 1634 aa10.62□□□□□ -0.71
GPC3-204ENST00000631057 USP32Q8NFA0 1604 aa10.62□□□□□ -0.71
GPC3-204ENST00000631057 ZNF521Q96K83 1311 aa10.62□□□□□ -0.71
GPC3-204ENST00000631057 CENPJQ9HC77 1338 aaPredicted RBP10.62□□□□□ -0.71
GPC3-204ENST00000631057 PLEKHH1Q9ULM0 1364 aa10.61□□□□□ -0.71
GPC3-204ENST00000631057 ADGRB1O14514 1584 aa10.61□□□□□ -0.71
GPC3-204ENST00000631057 GOLGA2Q08379 1002 aa10.6□□□□□ -0.71
GPC3-204ENST00000631057 NGEFQ8N5V2 710 aa10.6□□□□□ -0.71
GPC3-204ENST00000631057 SIGLEC1Q9BZZ2 1709 aa10.6□□□□□ -0.71
GPC3-204ENST00000631057 CHGAP10645 457 aaKnown RBP10.6□□□□□ -0.71
GPC3-204ENST00000631057 MS4A1P11836 297 aa10.6□□□□□ -0.71
GPC3-204ENST00000631057 RICTORQ6R327 1708 aa10.6□□□□□ -0.71
GPC3-204ENST00000631057 C14orf93Q9H972 538 aaKnown RBP10.6□□□□□ -0.71
GPC3-204ENST00000631057 DIP2BQ9P265 1576 aa10.6□□□□□ -0.71
GPC3-204ENST00000631057 DIP2CQ9Y2E4 1556 aa10.6□□□□□ -0.71
GPC3-204ENST00000631057 ARHGEF28Q8N1W1 1705 aaKnown RBP10.59□□□□□ -0.71
GPC3-204ENST00000631057 DUSP27Q5VZP5 1158 aa10.59□□□□□ -0.71
GPC3-204ENST00000631057 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.59□□□□□ -0.71
GPC3-204ENST00000631057 BBXQ8WY36 941 aaPredicted RBP10.59□□□□□ -0.71
GPC3-204ENST00000631057 NOP58Q9Y2X3 529 aaKnown RBP10.59□□□□□ -0.71
GPC3-204ENST00000631057 VASPP50552 380 aaPredicted RBP10.58□□□□□ -0.72
GPC3-204ENST00000631057 CRBNQ96SW2 442 aa10.58□□□□□ -0.72
GPC3-204ENST00000631057 POLR3AO14802 1390 aaPredicted RBP10.58□□□□□ -0.72
GPC3-204ENST00000631057 SHPRHQ149N8 1683 aa10.57□□□□□ -0.72
GPC3-204ENST00000631057 PLIN1O60240 522 aa10.57□□□□□ -0.72
GPC3-204ENST00000631057 GGT6Q6P531 493 aa10.57□□□□□ -0.72
GPC3-204ENST00000631057 CARD14Q9BXL6 1004 aa10.57□□□□□ -0.72
GPC3-204ENST00000631057 ARHGAP31Q2M1Z3 1444 aa10.57□□□□□ -0.72
GPC3-204ENST00000631057 NEXMIFQ5QGS0 1516 aa10.57□□□□□ -0.72
GPC3-204ENST00000631057 MYO5BQ9ULV0 1848 aa10.56□□□□□ -0.72
GPC3-204ENST00000631057 SLFN5Q08AF3 891 aa10.56□□□□□ -0.72
GPC3-204ENST00000631057 IPO9Q96P70 1041 aaKnown RBP10.56□□□□□ -0.72
GPC3-204ENST00000631057 NSD3Q9BZ95 1437 aa10.56□□□□□ -0.72
GPC3-204ENST00000631057 NKTRP30414 1462 aaKnown RBP10.56□□□□□ -0.72
GPC3-204ENST00000631057 TRMT2AQ8IZ69 625 aaKnown RBP10.56□□□□□ -0.72
GPC3-204ENST00000631057 PUS7Q96PZ0 661 aaKnown RBP10.56□□□□□ -0.72
GPC3-204ENST00000631057 CCDC146Q8IYE0 955 aa10.55□□□□□ -0.72
GPC3-204ENST00000631057 TRAK1Q9UPV9 953 aa10.55□□□□□ -0.72
GPC3-204ENST00000631057 E9PSI1 815 aa10.54□□□□□ -0.72
GPC3-204ENST00000631057 APAF1O14727 1248 aa10.54□□□□□ -0.72
GPC3-204ENST00000631057 VGFO15240 615 aaPredicted RBP10.54□□□□□ -0.72
GPC3-204ENST00000631057 PAXIP1Q6ZW49 1069 aaPredicted RBP10.54□□□□□ -0.72
GPC3-204ENST00000631057 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
GPC3-204ENST00000631057 PREX1Q8TCU6 1659 aa10.54□□□□□ -0.72
GPC3-204ENST00000631057 PDE4AP27815 886 aa10.53□□□□□ -0.72
GPC3-204ENST00000631057 MORC1Q86VD1 984 aa10.53□□□□□ -0.72
GPC3-204ENST00000631057 BACH2Q9BYV9 841 aa10.53□□□□□ -0.72
GPC3-204ENST00000631057 ZFYVE9O95405 1425 aa10.53□□□□□ -0.72
GPC3-204ENST00000631057 NSD2O96028 1365 aa10.52□□□□□ -0.72
GPC3-204ENST00000631057 EVC2Q86UK5 1308 aa10.52□□□□□ -0.72
GPC3-204ENST00000631057 CENPQQ7L2Z9 268 aaPredicted RBP10.52□□□□□ -0.72
GPC3-204ENST00000631057 KIF13AQ9H1H9 1805 aa10.52□□□□□ -0.73
GPC3-204ENST00000631057 TULP4Q9NRJ4 1543 aa10.52□□□□□ -0.73
GPC3-204ENST00000631057 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.73
GPC3-204ENST00000631057 CGNL1Q0VF96 1302 aa10.52□□□□□ -0.73
GPC3-204ENST00000631057 KDM2BQ8NHM5 1336 aa10.52□□□□□ -0.73
GPC3-204ENST00000631057 C20orf194Q5TEA3 1177 aa10.52□□□□□ -0.73
GPC3-204ENST00000631057 ZBTB47Q9UFB7 747 aaPredicted RBP10.52□□□□□ -0.73
GPC3-204ENST00000631057 RAPGEF3O95398 923 aa10.51□□□□□ -0.73
GPC3-204ENST00000631057 TMEM132EQ6IEE7 984 aa10.51□□□□□ -0.73
GPC3-204ENST00000631057 IFNLR1Q8IU57 520 aaPredicted RBP10.51□□□□□ -0.73
GPC3-204ENST00000631057 HOMEZQ8IX15 550 aa10.51□□□□□ -0.73
GPC3-204ENST00000631057 CFAP44Q96MT7 982 aa10.51□□□□□ -0.73
GPC3-204ENST00000631057 SLC52A1Q9NWF4 448 aa10.51□□□□□ -0.73
GPC3-204ENST00000631057 ANKRD26Q9UPS8 1709 aa10.51□□□□□ -0.73
GPC3-204ENST00000631057 TMEM131LA2VDJ0 1609 aa10.51□□□□□ -0.73
GPC3-204ENST00000631057 ANKRD36BQ8N2N9 1353 aa10.5□□□□□ -0.73
GPC3-204ENST00000631057 PAK3O75914 559 aaPredicted RBP10.5□□□□□ -0.73
GPC3-204ENST00000631057 CFAP53Q96M91 514 aa10.5□□□□□ -0.73
GPC3-204ENST00000631057 SLC12A5Q9H2X9 1139 aa10.5□□□□□ -0.73
GPC3-204ENST00000631057 VIRMAQ69YN4 1812 aaKnown RBP10.5□□□□□ -0.73
GPC3-204ENST00000631057 IQSEC2Q5JU85 1478 aa10.5□□□□□ -0.73
GPC3-204ENST00000631057 CLTCQ00610 1675 aaKnown RBP10.49□□□□□ -0.73
GPC3-204ENST00000631057 TSPOAP1O95153 1857 aa10.49□□□□□ -0.73
GPC3-204ENST00000631057 RUNDC1Q96C34 613 aa10.48□□□□□ -0.73
GPC3-204ENST00000631057 WWC1Q8IX03 1113 aa10.48□□□□□ -0.73
GPC3-204ENST00000631057 SPINK5Q9NQ38 1064 aaPredicted RBP10.48□□□□□ -0.73
GPC3-204ENST00000631057 NPM2Q86SE8 214 aaKnown RBP10.47□□□□□ -0.73
GPC3-204ENST00000631057 YEATS2Q9ULM3 1422 aa10.47□□□□□ -0.73
GPC3-204ENST00000631057 ADGRB2O60241 1585 aa10.46□□□□□ -0.74
GPC3-204ENST00000631057 IDI1Q13907 227 aa10.46□□□□□ -0.74
GPC3-204ENST00000631057 PDE3AQ14432 1141 aa10.46□□□□□ -0.74
GPC3-204ENST00000631057 REREQ9P2R6 1566 aa10.45□□□□□ -0.74
GPC3-204ENST00000631057 KIF20BQ96Q89 1820 aa10.45□□□□□ -0.74
GPC3-204ENST00000631057 SPDYE4A6NLX3 237 aa10.45□□□□□ -0.74
GPC3-204ENST00000631057 TNNT2P45379 298 aaPredicted RBP10.45□□□□□ -0.74
GPC3-204ENST00000631057 WDR63Q8IWG1 891 aa10.45□□□□□ -0.74
GPC3-204ENST00000631057 DDRGK1Q96HY6 314 aa10.45□□□□□ -0.74
GPC3-204ENST00000631057 ATAD2Q6PL18 1390 aa10.45□□□□□ -0.74
GPC3-204ENST00000631057 PTPRMP28827 1452 aa10.45□□□□□ -0.74
GPC3-204ENST00000631057 BCAR3O75815 825 aa10.44□□□□□ -0.74
GPC3-204ENST00000631057 MTHFSP49914 203 aa10.44□□□□□ -0.74
GPC3-204ENST00000631057 NBR1Q14596 966 aa10.44□□□□□ -0.74
GPC3-204ENST00000631057 CCDC27Q2M243 656 aa10.44□□□□□ -0.74
GPC3-204ENST00000631057 ABCC11Q96J66 1382 aa10.44□□□□□ -0.74
GPC3-204ENST00000631057 TRHP20396 242 aaPredicted RBP10.43□□□□□ -0.74
GPC3-204ENST00000631057 NUTM2DQ5VT03 806 aaPredicted RBP10.43□□□□□ -0.74
GPC3-204ENST00000631057 TCP11L2Q8N4U5 519 aa10.43□□□□□ -0.74
GPC3-204ENST00000631057 MED14O60244 1454 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms