RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	SENP3	Q9H4L4	574 aa	Predicted RBP	20.25	■□□□□ 0.83
BBS1-225	ENST00000630659	RNF123	Q5XPI4	1314 aa		20.24	■□□□□ 0.83
BBS1-225	ENST00000630659	PPM1G	O15355	546 aa	Predicted RBP	20.23	■□□□□ 0.83
BBS1-225	ENST00000630659	NLRP13	Q86W25	1043 aa		20.23	■□□□□ 0.83
BBS1-225	ENST00000630659	STK26	Q9P289	416 aa		20.23	■□□□□ 0.83
BBS1-225	ENST00000630659	YTHDC2	Q9H6S0	1430 aa	Known RBP	20.23	■□□□□ 0.83
BBS1-225	ENST00000630659	HDGF	P51858	240 aa	Known RBP	20.22	■□□□□ 0.83
BBS1-225	ENST00000630659	PNISR	Q8TF01	805 aa	Known RBP	20.22	■□□□□ 0.83
BBS1-225	ENST00000630659	PUS7	Q96PZ0	661 aa	Known RBP	20.21	■□□□□ 0.83
BBS1-225	ENST00000630659	AMER1	Q5JTC6	1135 aa	Predicted RBP	20.21	■□□□□ 0.83
BBS1-225	ENST00000630659	FER1L4	A9Z1Z3	1794 aa		20.21	■□□□□ 0.83
BBS1-225	ENST00000630659	EVC2	Q86UK5	1308 aa		20.2	■□□□□ 0.82
BBS1-225	ENST00000630659	NPC1L1	Q9UHC9	1359 aa		20.2	■□□□□ 0.82
BBS1-225	ENST00000630659	UBR1	Q8IWV7	1749 aa		20.2	■□□□□ 0.82
BBS1-225	ENST00000630659	PTPRM	P28827	1452 aa		20.2	■□□□□ 0.82
BBS1-225	ENST00000630659	CEBPA	P49715	358 aa	Predicted RBP	20.19	■□□□□ 0.82
BBS1-225	ENST00000630659	NLRP1	Q9C000	1473 aa		20.19	■□□□□ 0.82
BBS1-225	ENST00000630659	C3	P01024	1663 aa		20.19	■□□□□ 0.82
BBS1-225	ENST00000630659	TULP4	Q9NRJ4	1543 aa		20.18	■□□□□ 0.82
BBS1-225	ENST00000630659	SETD1A	O15047	1707 aa	Known RBP	20.17	■□□□□ 0.82
BBS1-225	ENST00000630659	TMEM2	Q9UHN6	1383 aa		20.17	■□□□□ 0.82
BBS1-225	ENST00000630659	POGK	Q9P215	609 aa		20.16	■□□□□ 0.82
BBS1-225	ENST00000630659	SAFB2	Q14151	953 aa	Known RBP eCLIP	20.15	■□□□□ 0.82
BBS1-225	ENST00000630659	PRAM1	Q96QH2	718 aa		20.15	■□□□□ 0.82
BBS1-225	ENST00000630659	NRXN3	Q9Y4C0	1643 aa		20.15	■□□□□ 0.82
BBS1-225	ENST00000630659	LRPPRC	P42704	1394 aa	Known RBP	20.15	■□□□□ 0.82
BBS1-225	ENST00000630659	DLC1	Q96QB1	1528 aa		20.15	■□□□□ 0.82
BBS1-225	ENST00000630659	CARD14	Q9BXL6	1004 aa		20.14	■□□□□ 0.81
BBS1-225	ENST00000630659	SLC12A5	Q9H2X9	1139 aa		20.13	■□□□□ 0.81
BBS1-225	ENST00000630659	ABCC11	Q96J66	1382 aa		20.12	■□□□□ 0.81
BBS1-225	ENST00000630659	NEFM	P07197	916 aa		20.12	■□□□□ 0.81
BBS1-225	ENST00000630659	NUDC	Q9Y266	331 aa		20.12	■□□□□ 0.81
BBS1-225	ENST00000630659	TCERG1	O14776	1098 aa	Known RBP	20.11	■□□□□ 0.81
BBS1-225	ENST00000630659	PPP2R1A	P30153	589 aa		20.11	■□□□□ 0.81
BBS1-225	ENST00000630659	CABP2	Q9NPB3	220 aa		20.1	■□□□□ 0.81
BBS1-225	ENST00000630659	MINK1	Q8N4C8	1332 aa	Predicted RBP	20.1	■□□□□ 0.81
BBS1-225	ENST00000630659	PLPPR3	Q6T4P5	718 aa		20.09	■□□□□ 0.81
BBS1-225	ENST00000630659	MET	P08581	1390 aa		20.08	■□□□□ 0.81
BBS1-225	ENST00000630659	NSD3	Q9BZ95	1437 aa		20.08	■□□□□ 0.8
BBS1-225	ENST00000630659	MS4A1	P11836	297 aa		20.08	■□□□□ 0.8
BBS1-225	ENST00000630659	SRPK2	P78362	688 aa	Known RBP	20.08	■□□□□ 0.8
BBS1-225	ENST00000630659	NINL	Q9Y2I6	1382 aa		20.07	■□□□□ 0.8
BBS1-225	ENST00000630659	ATAD2	Q6PL18	1390 aa		20.06	■□□□□ 0.8
BBS1-225	ENST00000630659	PLEKHG1	Q9ULL1	1385 aa		20.06	■□□□□ 0.8
BBS1-225	ENST00000630659	RTN4	Q9NQC3	1192 aa	Known RBP	20.06	■□□□□ 0.8
BBS1-225	ENST00000630659	ANKRD36B	Q8N2N9	1353 aa		20.06	■□□□□ 0.8
BBS1-225	ENST00000630659	LTK	P29376	864 aa		20.06	■□□□□ 0.8
BBS1-225	ENST00000630659	DDRGK1	Q96HY6	314 aa		20.06	■□□□□ 0.8
BBS1-225	ENST00000630659	RSPH6A	Q9H0K4	717 aa		20.06	■□□□□ 0.8
BBS1-225	ENST00000630659	SLIT1	O75093	1534 aa		20.05	■□□□□ 0.8
BBS1-225	ENST00000630659	TXNDC2	Q86VQ3	553 aa		20.05	■□□□□ 0.8
BBS1-225	ENST00000630659	SIRT1	Q96EB6	747 aa		20.05	■□□□□ 0.8
BBS1-225	ENST00000630659	EID1	Q9Y6B2	187 aa		20.05	■□□□□ 0.8
BBS1-225	ENST00000630659	ARHGAP23	Q9P227	1491 aa		20.04	■□□□□ 0.8
BBS1-225	ENST00000630659	USP32	Q8NFA0	1604 aa		20.04	■□□□□ 0.8
BBS1-225	ENST00000630659	WAPL	Q7Z5K2	1190 aa		20.04	■□□□□ 0.8
BBS1-225	ENST00000630659	INSR	P06213	1382 aa		20.04	■□□□□ 0.8
BBS1-225	ENST00000630659	KNDC1	Q76NI1	1749 aa		20.04	■□□□□ 0.8
BBS1-225	ENST00000630659	ADAMTS13	Q76LX8	1427 aa		20.04	■□□□□ 0.8
BBS1-225	ENST00000630659	CDK19	Q9BWU1	502 aa		20.04	■□□□□ 0.8
BBS1-225	ENST00000630659	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	20.04	■□□□□ 0.8
BBS1-225	ENST00000630659	PLEKHH1	Q9ULM0	1364 aa		20.03	■□□□□ 0.8
BBS1-225	ENST00000630659	THEMIS	Q8N1K5	641 aa	Predicted RBP	20.03	■□□□□ 0.8
BBS1-225	ENST00000630659	RIMS1	Q86UR5	1692 aa	Known RBP	20.03	■□□□□ 0.8
BBS1-225	ENST00000630659	TECPR2	O15040	1411 aa		20.02	■□□□□ 0.8
BBS1-225	ENST00000630659	FAM135B	Q49AJ0	1406 aa		20.02	■□□□□ 0.8
BBS1-225	ENST00000630659	GSE1	Q14687	1217 aa		20.02	■□□□□ 0.79
BBS1-225	ENST00000630659	CGNL1	Q0VF96	1302 aa		20	■□□□□ 0.79
BBS1-225	ENST00000630659	CPS1	P31327	1500 aa		20	■□□□□ 0.79
BBS1-225	ENST00000630659	ADAMTSL3	P82987	1691 aa		19.99	■□□□□ 0.79
BBS1-225	ENST00000630659	MED14	O60244	1454 aa		19.99	■□□□□ 0.79
BBS1-225	ENST00000630659	MORC1	Q86VD1	984 aa		19.98	■□□□□ 0.79
BBS1-225	ENST00000630659	TERF2IP	Q9NYB0	399 aa		19.98	■□□□□ 0.79
BBS1-225	ENST00000630659		A0A1W2PP64	1363 aa		19.97	■□□□□ 0.79
BBS1-225	ENST00000630659	NSD2	O96028	1365 aa		19.97	■□□□□ 0.79
BBS1-225	ENST00000630659	BLM	P54132	1417 aa	Predicted RBP	19.97	■□□□□ 0.79
BBS1-225	ENST00000630659	WDR43	Q15061	677 aa	Known RBP eCLIP	19.96	■□□□□ 0.79
BBS1-225	ENST00000630659	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	19.95	■□□□□ 0.78
BBS1-225	ENST00000630659	WASL	O00401	505 aa	Predicted RBP	19.94	■□□□□ 0.78
BBS1-225	ENST00000630659	ADAMTS8	Q9UP79	889 aa		19.94	■□□□□ 0.78
BBS1-225	ENST00000630659	TBX22	Q9Y458	520 aa		19.94	■□□□□ 0.78
BBS1-225	ENST00000630659	CD163L1	Q9NR16	1453 aa		19.94	■□□□□ 0.78
BBS1-225	ENST00000630659	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	19.94	■□□□□ 0.78
BBS1-225	ENST00000630659	FAM43A	Q8N2R8	423 aa		19.94	■□□□□ 0.78
BBS1-225	ENST00000630659	SLC26A8	Q96RN1	970 aa		19.94	■□□□□ 0.78
BBS1-225	ENST00000630659	BACH2	Q9BYV9	841 aa		19.94	■□□□□ 0.78
BBS1-225	ENST00000630659	SENP3-EIF4A1	A0A087X0R7	540 aa		19.93	■□□□□ 0.78
BBS1-225	ENST00000630659	CABP1	Q9NZU7	370 aa		19.93	■□□□□ 0.78
BBS1-225	ENST00000630659	ROBO2	Q9HCK4	1378 aa		19.92	■□□□□ 0.78
BBS1-225	ENST00000630659	PDE4A	P27815	886 aa		19.92	■□□□□ 0.78
BBS1-225	ENST00000630659	GLIPR1L2	Q4G1C9	344 aa		19.92	■□□□□ 0.78
BBS1-225	ENST00000630659	LAS1L	Q9Y4W2	734 aa	Known RBP	19.92	■□□□□ 0.78
BBS1-225	ENST00000630659	POLR3A	O14802	1390 aa	Predicted RBP	19.91	■□□□□ 0.78
BBS1-225	ENST00000630659	DIP2A	Q14689	1571 aa		19.91	■□□□□ 0.78
BBS1-225	ENST00000630659	PTPRU	Q92729	1446 aa		19.91	■□□□□ 0.78
BBS1-225	ENST00000630659	ATP7B	P35670	1465 aa		19.9	■□□□□ 0.78
BBS1-225	ENST00000630659	EIF5B	O60841	1220 aa	Known RBP	19.88	■□□□□ 0.77
BBS1-225	ENST00000630659	TNNT2	P45379	298 aa	Predicted RBP	19.88	■□□□□ 0.77
BBS1-225	ENST00000630659	ZNF142	P52746	1687 aa	Predicted RBP	19.87	■□□□□ 0.77
BBS1-225	ENST00000630659	PDE3B	Q13370	1112 aa		19.87	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms