RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 GLI3P10071 1580 aa5.31□□□□□ -1.56
SCARNA4.1-201ENST00000628597 MAST1Q9Y2H9 1570 aa5.31□□□□□ -1.56
SCARNA4.1-201ENST00000628597 CHGAP10645 457 aaKnown RBP5.31□□□□□ -1.56
SCARNA4.1-201ENST00000628597 POLD1P28340 1107 aa5.31□□□□□ -1.56
SCARNA4.1-201ENST00000628597 YBX3P16989 372 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCARNA4.1-201ENST00000628597 HDGFP51858 240 aaKnown RBP5.3□□□□□ -1.56
SCARNA4.1-201ENST00000628597 RGPD1P0DJD0 1748 aa5.3□□□□□ -1.56
SCARNA4.1-201ENST00000628597 SLIT1O75093 1534 aa5.29□□□□□ -1.56
SCARNA4.1-201ENST00000628597 LBX1P52954 281 aa5.29□□□□□ -1.56
SCARNA4.1-201ENST00000628597 SGIP1Q9BQI5 828 aa5.29□□□□□ -1.56
SCARNA4.1-201ENST00000628597 KIDINS220Q9ULH0 1771 aa5.29□□□□□ -1.56
SCARNA4.1-201ENST00000628597 SLIT2O94813 1529 aa5.28□□□□□ -1.56
SCARNA4.1-201ENST00000628597 BRWD3Q6RI45 1802 aa5.28□□□□□ -1.56
SCARNA4.1-201ENST00000628597 RANGAP1P46060 587 aaPredicted RBP5.28□□□□□ -1.56
SCARNA4.1-201ENST00000628597 PDE3BQ13370 1112 aa5.28□□□□□ -1.56
SCARNA4.1-201ENST00000628597 ANO8Q9HCE9 1232 aaPredicted RBP5.28□□□□□ -1.56
SCARNA4.1-201ENST00000628597 TBX22Q9Y458 520 aa5.28□□□□□ -1.56
SCARNA4.1-201ENST00000628597 ADCY9O60503 1353 aa5.28□□□□□ -1.56
SCARNA4.1-201ENST00000628597 MYOM1P52179 1685 aa5.28□□□□□ -1.56
SCARNA4.1-201ENST00000628597 RPRD2Q5VT52 1461 aaKnown RBP5.27□□□□□ -1.57
SCARNA4.1-201ENST00000628597 DCCP43146 1447 aa5.27□□□□□ -1.57
SCARNA4.1-201ENST00000628597 HABP4Q5JVS0 413 aaKnown RBP5.27□□□□□ -1.57
SCARNA4.1-201ENST00000628597 KIAA1210Q9ULL0 1709 aa5.27□□□□□ -1.57
SCARNA4.1-201ENST00000628597 WDR90Q96KV7 1748 aa5.26□□□□□ -1.57
SCARNA4.1-201ENST00000628597 ABCC5O15440 1437 aa5.26□□□□□ -1.57
SCARNA4.1-201ENST00000628597 MST1RQ04912 1400 aa5.26□□□□□ -1.57
SCARNA4.1-201ENST00000628597 SLC15A2Q16348 729 aa5.26□□□□□ -1.57
SCARNA4.1-201ENST00000628597 SMC1BQ8NDV3 1235 aa5.26□□□□□ -1.57
SCARNA4.1-201ENST00000628597 NLGN2Q8NFZ4 835 aa5.26□□□□□ -1.57
SCARNA4.1-201ENST00000628597 PMFBP1Q8TBY8 1022 aa5.26□□□□□ -1.57
SCARNA4.1-201ENST00000628597 AMOTL2Q9Y2J4 779 aa5.26□□□□□ -1.57
SCARNA4.1-201ENST00000628597 DHX29Q7Z478 1369 aaKnown RBP5.26□□□□□ -1.57
SCARNA4.1-201ENST00000628597 MYOM2P54296 1465 aa5.26□□□□□ -1.57
SCARNA4.1-201ENST00000628597 MYO5CQ9NQX4 1742 aa5.26□□□□□ -1.57
SCARNA4.1-201ENST00000628597 SAMD9LQ8IVG5 1584 aa5.25□□□□□ -1.57
SCARNA4.1-201ENST00000628597 CLIP1P30622 1438 aa5.25□□□□□ -1.57
SCARNA4.1-201ENST00000628597 NMRK2Q9NPI5 230 aa5.25□□□□□ -1.57
SCARNA4.1-201ENST00000628597 CUL9Q8IWT3 2517 aa5.25□□□□□ -1.57
SCARNA4.1-201ENST00000628597 SAMD9Q5K651 1589 aa5.25□□□□□ -1.57
SCARNA4.1-201ENST00000628597 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.24□□□□□ -1.57
SCARNA4.1-201ENST00000628597 PLSCR1O15162 318 aa5.24□□□□□ -1.57
SCARNA4.1-201ENST00000628597 ORAI2Q96SN7 254 aa5.24□□□□□ -1.57
SCARNA4.1-201ENST00000628597 PLXNC1O60486 1568 aa5.24□□□□□ -1.57
SCARNA4.1-201ENST00000628597 NPHP3Q7Z494 1330 aa5.23□□□□□ -1.57
SCARNA4.1-201ENST00000628597 C11orf95C9JLR9 678 aaPredicted RBP5.23□□□□□ -1.57
SCARNA4.1-201ENST00000628597 PLEKHG5O94827 1062 aa5.23□□□□□ -1.57
SCARNA4.1-201ENST00000628597 MKRN1Q9UHC7 482 aaKnown RBP5.23□□□□□ -1.57
SCARNA4.1-201ENST00000628597 ERVK-7P63135 1459 aa5.23□□□□□ -1.57
SCARNA4.1-201ENST00000628597 TET3O43151 1660 aa5.22□□□□□ -1.57
SCARNA4.1-201ENST00000628597 NBPF15Q8N660 670 aa5.22□□□□□ -1.57
SCARNA4.1-201ENST00000628597 GPATCH8Q9UKJ3 1502 aaKnown RBP5.22□□□□□ -1.57
SCARNA4.1-201ENST00000628597 ADGRL3Q9HAR2 1447 aa5.22□□□□□ -1.57
SCARNA4.1-201ENST00000628597 MNX1P50219 401 aaPredicted RBP5.21□□□□□ -1.58
SCARNA4.1-201ENST00000628597 XPCQ01831 940 aaPredicted RBP5.21□□□□□ -1.58
SCARNA4.1-201ENST00000628597 PPP4R3CPQ6ZMV5 832 aa5.21□□□□□ -1.58
SCARNA4.1-201ENST00000628597 BTG4Q9NY30 223 aa5.21□□□□□ -1.58
SCARNA4.1-201ENST00000628597 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.2□□□□□ -1.58
SCARNA4.1-201ENST00000628597 PIK3R4Q99570 1358 aa5.2□□□□□ -1.58
SCARNA4.1-201ENST00000628597 EFCAB6Q5THR3 1501 aa5.2□□□□□ -1.58
SCARNA4.1-201ENST00000628597 HSPA8P11142 646 aaKnown RBP5.2□□□□□ -1.58
SCARNA4.1-201ENST00000628597 IDI1Q13907 227 aa5.2□□□□□ -1.58
SCARNA4.1-201ENST00000628597 SLC16A10Q8TF71 515 aa5.2□□□□□ -1.58
SCARNA4.1-201ENST00000628597 TROQ12816 1431 aaPredicted RBP5.2□□□□□ -1.58
SCARNA4.1-201ENST00000628597 SPATA31A5Q5VU36 1347 aa5.2□□□□□ -1.58
SCARNA4.1-201ENST00000628597 SPATA31A7Q8IWB4 1347 aa5.2□□□□□ -1.58
SCARNA4.1-201ENST00000628597 NUP188Q5SRE5 1749 aa5.2□□□□□ -1.58
SCARNA4.1-201ENST00000628597 UBR1Q8IWV7 1749 aa5.2□□□□□ -1.58
SCARNA4.1-201ENST00000628597 CACNA1AO00555 2505 aa5.2□□□□□ -1.58
SCARNA4.1-201ENST00000628597 FYCO1Q9BQS8 1478 aa5.2□□□□□ -1.58
SCARNA4.1-201ENST00000628597 LRPPRCP42704 1394 aaKnown RBP5.19□□□□□ -1.58
SCARNA4.1-201ENST00000628597 PLEKHG1Q9ULL1 1385 aa5.19□□□□□ -1.58
SCARNA4.1-201ENST00000628597 SYCP2Q9BX26 1530 aa5.19□□□□□ -1.58
SCARNA4.1-201ENST00000628597 FOXO3O43524 673 aa5.19□□□□□ -1.58
SCARNA4.1-201ENST00000628597 FXR1P51114 621 aaKnown RBP eCLIP5.19□□□□□ -1.58
SCARNA4.1-201ENST00000628597 ESCO1Q5FWF5 840 aa5.19□□□□□ -1.58
SCARNA4.1-201ENST00000628597 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.19□□□□□ -1.58
SCARNA4.1-201ENST00000628597 BEGAINQ9BUH8 593 aa5.19□□□□□ -1.58
SCARNA4.1-201ENST00000628597 WBP1LQ9NX94 342 aa5.19□□□□□ -1.58
SCARNA4.1-201ENST00000628597 ZNF219Q9P2Y4 722 aaPredicted RBP5.19□□□□□ -1.58
SCARNA4.1-201ENST00000628597 KDM2BQ8NHM5 1336 aa5.19□□□□□ -1.58
SCARNA4.1-201ENST00000628597 C1orf167Q5SNV9 1468 aa5.19□□□□□ -1.58
SCARNA4.1-201ENST00000628597 TNS1Q9HBL0 1735 aaKnown RBP5.18□□□□□ -1.58
SCARNA4.1-201ENST00000628597 SOX10P56693 466 aa5.18□□□□□ -1.58
SCARNA4.1-201ENST00000628597 TXNRD1Q16881 649 aa5.18□□□□□ -1.58
SCARNA4.1-201ENST00000628597 SNX27Q96L92 541 aa5.18□□□□□ -1.58
SCARNA4.1-201ENST00000628597 MCOLN1Q9GZU1 580 aa5.18□□□□□ -1.58
SCARNA4.1-201ENST00000628597 RRAGCQ9HB90 399 aa5.18□□□□□ -1.58
SCARNA4.1-201ENST00000628597 CFDP1Q9UEE9 299 aaPredicted RBP5.18□□□□□ -1.58
SCARNA4.1-201ENST00000628597 TMEM131LA2VDJ0 1609 aa5.18□□□□□ -1.58
SCARNA4.1-201ENST00000628597 RREB1Q92766 1687 aa5.18□□□□□ -1.58
SCARNA4.1-201ENST00000628597 NOS1P29475 1434 aa5.17□□□□□ -1.58
SCARNA4.1-201ENST00000628597 MAP2K1Q02750 393 aaPredicted RBP5.17□□□□□ -1.58
SCARNA4.1-201ENST00000628597 LMOD2Q6P5Q4 547 aa5.17□□□□□ -1.58
SCARNA4.1-201ENST00000628597 PROM2Q8N271 834 aa5.17□□□□□ -1.58
SCARNA4.1-201ENST00000628597 CABLES1Q8TDN4 633 aa5.17□□□□□ -1.58
SCARNA4.1-201ENST00000628597 CTTNBP2Q8WZ74 1663 aa5.17□□□□□ -1.58
SCARNA4.1-201ENST00000628597 CASZ1Q86V15 1759 aa5.16□□□□□ -1.58
SCARNA4.1-201ENST00000628597 KIAA1107Q9UPP5 1409 aa5.16□□□□□ -1.58
SCARNA4.1-201ENST00000628597 NCBP3Q53F19 620 aaKnown RBP5.16□□□□□ -1.58
SCARNA4.1-201ENST00000628597 FAM122AQ96E09 287 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms