RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 POLR3GLQ9BT43 218 aa11.83□□□□□ -0.52
CHD2-211ENST00000627460 ADAMTSL3P82987 1691 aa11.82□□□□□ -0.52
CHD2-211ENST00000627460 ALKQ9UM73 1620 aa11.82□□□□□ -0.52
CHD2-211ENST00000627460 SLIT1O75093 1534 aa11.81□□□□□ -0.52
CHD2-211ENST00000627460 DLC1Q96QB1 1528 aa11.81□□□□□ -0.52
CHD2-211ENST00000627460 PLCD3Q8N3E9 789 aa11.8□□□□□ -0.52
CHD2-211ENST00000627460 EVC2Q86UK5 1308 aa11.8□□□□□ -0.52
CHD2-211ENST00000627460 DISP3Q9P2K9 1392 aa11.79□□□□□ -0.52
CHD2-211ENST00000627460 PLEKHG1Q9ULL1 1385 aa11.79□□□□□ -0.52
CHD2-211ENST00000627460 NINLQ9Y2I6 1382 aa11.79□□□□□ -0.52
CHD2-211ENST00000627460 YTHDC2Q9H6S0 1430 aaKnown RBP11.79□□□□□ -0.52
CHD2-211ENST00000627460 RIMS1Q86UR5 1692 aaKnown RBP11.79□□□□□ -0.52
CHD2-211ENST00000627460 QRICH2Q9H0J4 1663 aa11.79□□□□□ -0.52
CHD2-211ENST00000627460 RALBP1Q15311 655 aa11.79□□□□□ -0.52
CHD2-211ENST00000627460 SIRT1Q96EB6 747 aa11.79□□□□□ -0.52
CHD2-211ENST00000627460 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
CHD2-211ENST00000627460 TRAK1Q9UPV9 953 aa11.79□□□□□ -0.52
CHD2-211ENST00000627460 DIP2AQ14689 1571 aa11.79□□□□□ -0.52
CHD2-211ENST00000627460 LRPPRCP42704 1394 aaKnown RBP11.79□□□□□ -0.52
CHD2-211ENST00000627460 ARHGAP23Q9P227 1491 aa11.78□□□□□ -0.52
CHD2-211ENST00000627460 ARHGEF28Q8N1W1 1705 aaKnown RBP11.78□□□□□ -0.52
CHD2-211ENST00000627460 ABCC11Q96J66 1382 aa11.78□□□□□ -0.52
CHD2-211ENST00000627460 SETD1BQ9UPS6 1966 aaKnown RBP11.78□□□□□ -0.52
CHD2-211ENST00000627460 ZNF142P52746 1687 aaPredicted RBP11.77□□□□□ -0.53
CHD2-211ENST00000627460 CEP170BQ9Y4F5 1589 aaPredicted RBP11.76□□□□□ -0.53
CHD2-211ENST00000627460 NUTM2DQ5VT03 806 aaPredicted RBP11.76□□□□□ -0.53
CHD2-211ENST00000627460 TMEM132EQ6IEE7 984 aa11.76□□□□□ -0.53
CHD2-211ENST00000627460 POGKQ9P215 609 aa11.76□□□□□ -0.53
CHD2-211ENST00000627460 NPC1L1Q9UHC9 1359 aa11.76□□□□□ -0.53
CHD2-211ENST00000627460 FAM135BQ49AJ0 1406 aa11.76□□□□□ -0.53
CHD2-211ENST00000627460 KNDC1Q76NI1 1749 aa11.75□□□□□ -0.53
CHD2-211ENST00000627460 CEBPAP49715 358 aaPredicted RBP11.75□□□□□ -0.53
CHD2-211ENST00000627460 TXNDC2Q86VQ3 553 aa11.75□□□□□ -0.53
CHD2-211ENST00000627460 BCANQ96GW7 911 aa11.75□□□□□ -0.53
CHD2-211ENST00000627460 KNSTRNQ9Y448 316 aa11.75□□□□□ -0.53
CHD2-211ENST00000627460 ATAD2Q6PL18 1390 aa11.75□□□□□ -0.53
CHD2-211ENST00000627460 TECPR2O15040 1411 aa11.75□□□□□ -0.53
CHD2-211ENST00000627460 ASXL1Q8IXJ9 1541 aa11.75□□□□□ -0.53
CHD2-211ENST00000627460 PLCB2Q00722 1185 aa11.74□□□□□ -0.53
CHD2-211ENST00000627460 PIK3R4Q99570 1358 aa11.74□□□□□ -0.53
CHD2-211ENST00000627460 PTPRMP28827 1452 aa11.74□□□□□ -0.53
CHD2-211ENST00000627460 SETD1AO15047 1707 aaKnown RBP11.74□□□□□ -0.53
CHD2-211ENST00000627460 PANK3Q9H999 370 aa11.73□□□□□ -0.53
CHD2-211ENST00000627460 TBX22Q9Y458 520 aa11.73□□□□□ -0.53
CHD2-211ENST00000627460 NRXN3Q9Y4C0 1643 aa11.73□□□□□ -0.53
CHD2-211ENST00000627460 CPS1P31327 1500 aa11.72□□□□□ -0.53
CHD2-211ENST00000627460 MYBBP1AQ9BQG0 1328 aaKnown RBP11.72□□□□□ -0.53
CHD2-211ENST00000627460 BRD4O60885 1362 aaPredicted RBP11.71□□□□□ -0.53
CHD2-211ENST00000627460 PER1O15534 1290 aaPredicted RBP11.71□□□□□ -0.53
CHD2-211ENST00000627460 ANKLE2Q86XL3 938 aa11.71□□□□□ -0.53
CHD2-211ENST00000627460 STK26Q9P289 416 aa11.71□□□□□ -0.53
CHD2-211ENST00000627460 PRAM1Q96QH2 718 aa11.7□□□□□ -0.54
CHD2-211ENST00000627460 MRS2Q9HD23 443 aa11.7□□□□□ -0.54
CHD2-211ENST00000627460 MYOM1P52179 1685 aa11.7□□□□□ -0.54
CHD2-211ENST00000627460 MED14O60244 1454 aa11.7□□□□□ -0.54
CHD2-211ENST00000627460 ADAMTS13Q76LX8 1427 aa11.69□□□□□ -0.54
CHD2-211ENST00000627460 PARD3Q8TEW0 1356 aa11.69□□□□□ -0.54
CHD2-211ENST00000627460 NLRP13Q86W25 1043 aa11.69□□□□□ -0.54
CHD2-211ENST00000627460 NSD2O96028 1365 aa11.68□□□□□ -0.54
CHD2-211ENST00000627460 ECM2O94769 699 aaPredicted RBP11.68□□□□□ -0.54
CHD2-211ENST00000627460 TMC1Q8TDI8 760 aa11.68□□□□□ -0.54
CHD2-211ENST00000627460 YTHDC1Q96MU7 727 aaKnown RBP11.68□□□□□ -0.54
CHD2-211ENST00000627460 TERF2IPQ9NYB0 399 aa11.68□□□□□ -0.54
CHD2-211ENST00000627460 TULP4Q9NRJ4 1543 aa11.68□□□□□ -0.54
CHD2-211ENST00000627460 PTCH1Q13635 1447 aa11.68□□□□□ -0.54
CHD2-211ENST00000627460 METP08581 1390 aa11.67□□□□□ -0.54
CHD2-211ENST00000627460 ANKRD36BQ8N2N9 1353 aa11.67□□□□□ -0.54
CHD2-211ENST00000627460 LTKP29376 864 aa11.67□□□□□ -0.54
CHD2-211ENST00000627460 SRPK2P78362 688 aaKnown RBP11.67□□□□□ -0.54
CHD2-211ENST00000627460 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
CHD2-211ENST00000627460 USP32Q8NFA0 1604 aa11.67□□□□□ -0.54
CHD2-211ENST00000627460 CGNL1Q0VF96 1302 aa11.66□□□□□ -0.54
CHD2-211ENST00000627460 PLEKHG5O94827 1062 aa11.65□□□□□ -0.54
CHD2-211ENST00000627460 HDGFL2Q7Z4V5 671 aaPredicted RBP11.65□□□□□ -0.54
CHD2-211ENST00000627460 ADGRB2O60241 1585 aa11.65□□□□□ -0.54
CHD2-211ENST00000627460 INSRP06213 1382 aa11.65□□□□□ -0.55
CHD2-211ENST00000627460 ATP7BP35670 1465 aa11.63□□□□□ -0.55
CHD2-211ENST00000627460 MINK1Q8N4C8 1332 aaPredicted RBP11.63□□□□□ -0.55
CHD2-211ENST00000627460 WASLO00401 505 aaPredicted RBP11.63□□□□□ -0.55
CHD2-211ENST00000627460 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
CHD2-211ENST00000627460 SAFB2Q14151 953 aaKnown RBP eCLIP11.62□□□□□ -0.55
CHD2-211ENST00000627460 AKT1S1Q96B36 256 aa11.62□□□□□ -0.55
CHD2-211ENST00000627460 CDK19Q9BWU1 502 aa11.62□□□□□ -0.55
CHD2-211ENST00000627460 CC2D1BQ5T0F9 858 aaKnown RBP11.61□□□□□ -0.55
CHD2-211ENST00000627460 AMOTL2Q9Y2J4 779 aa11.61□□□□□ -0.55
CHD2-211ENST00000627460 NPHP4O75161 1426 aaPredicted RBP11.6□□□□□ -0.55
CHD2-211ENST00000627460 NSD3Q9BZ95 1437 aa11.6□□□□□ -0.55
CHD2-211ENST00000627460 XRN1Q8IZH2 1706 aaKnown RBP11.6□□□□□ -0.55
CHD2-211ENST00000627460 SLC26A8Q96RN1 970 aa11.6□□□□□ -0.55
CHD2-211ENST00000627460 SLC12A5Q9H2X9 1139 aa11.6□□□□□ -0.55
CHD2-211ENST00000627460 CABP2Q9NPB3 220 aa11.6□□□□□ -0.55
CHD2-211ENST00000627460 CCDC61Q9Y6R9 512 aa11.6□□□□□ -0.55
CHD2-211ENST00000627460 WAPLQ7Z5K2 1190 aa11.59□□□□□ -0.55
CHD2-211ENST00000627460 ROBO2Q9HCK4 1378 aa11.58□□□□□ -0.56
CHD2-211ENST00000627460 RGL2O15211 777 aa11.58□□□□□ -0.56
CHD2-211ENST00000627460 SPDYE1Q8NFV5 336 aaPredicted RBP11.58□□□□□ -0.56
CHD2-211ENST00000627460 A0A1W2PP64 1363 aa11.57□□□□□ -0.56
CHD2-211ENST00000627460 PLEKHH1Q9ULM0 1364 aa11.57□□□□□ -0.56
CHD2-211ENST00000627460 HNRNPUQ00839 825 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHD2-211ENST00000627460 MORC1Q86VD1 984 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms