RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 TRIM47Q96LD4 638 aa9.34□□□□□ -0.91
VBP1-204ENST00000625964 GCGRP47871 477 aa9.33□□□□□ -0.92
VBP1-204ENST00000625964 GRIPAP1Q4V328 841 aa9.33□□□□□ -0.92
VBP1-204ENST00000625964 P3H3Q8IVL6 736 aa9.32□□□□□ -0.92
VBP1-204ENST00000625964 FAM181BA6NEQ2 426 aa9.31□□□□□ -0.92
VBP1-204ENST00000625964 DDX11L8A8MPP1 907 aa9.31□□□□□ -0.92
VBP1-204ENST00000625964 REPIN1Q9BWE0 567 aaKnown RBP9.31□□□□□ -0.92
VBP1-204ENST00000625964 SNRPBP14678 240 aaKnown RBP9.31□□□□□ -0.92
VBP1-204ENST00000625964 TRIM32Q13049 653 aa9.3□□□□□ -0.92
VBP1-204ENST00000625964 PRDM9Q9NQV7 894 aa9.3□□□□□ -0.92
VBP1-204ENST00000625964 GNPATO15228 680 aa9.28□□□□□ -0.92
VBP1-204ENST00000625964 Q3C1V9 767 aa9.28□□□□□ -0.92
VBP1-204ENST00000625964 FECHP22830 423 aa9.27□□□□□ -0.93
VBP1-204ENST00000625964 MMP16P51512 607 aa9.27□□□□□ -0.93
VBP1-204ENST00000625964 SLC16A10Q8TF71 515 aa9.27□□□□□ -0.93
VBP1-204ENST00000625964 MRGPRX2Q96LB1 330 aa9.27□□□□□ -0.93
VBP1-204ENST00000625964 J3QL48 77 aa9.26□□□□□ -0.93
VBP1-204ENST00000625964 SEMA3EO15041 775 aa9.26□□□□□ -0.93
VBP1-204ENST00000625964 LCE2CQ5TA81 110 aa9.26□□□□□ -0.93
VBP1-204ENST00000625964 SMYD5Q6GMV2 418 aa9.26□□□□□ -0.93
VBP1-204ENST00000625964 RNF19BQ6ZMZ0 732 aa9.26□□□□□ -0.93
VBP1-204ENST00000625964 SUZ12Q15022 739 aaKnown RBP9.24□□□□□ -0.93
VBP1-204ENST00000625964 TSHZ2Q9NRE2 1034 aa9.24□□□□□ -0.93
VBP1-204ENST00000625964 NPAS3Q8IXF0 933 aa9.23□□□□□ -0.93
VBP1-204ENST00000625964 HPS1Q92902 700 aa9.23□□□□□ -0.93
VBP1-204ENST00000625964 WNT7BP56706 349 aa9.22□□□□□ -0.93
VBP1-204ENST00000625964 NXF1Q9UBU9 619 aaKnown RBP9.21□□□□□ -0.93
VBP1-204ENST00000625964 DXOO77932 396 aaKnown RBP9.21□□□□□ -0.94
VBP1-204ENST00000625964 RC3H1Q5TC82 1133 aaKnown RBP9.21□□□□□ -0.94
VBP1-204ENST00000625964 USB1Q9BQ65 265 aaKnown RBP9.21□□□□□ -0.94
VBP1-204ENST00000625964 RBM26Q5T8P6 1007 aaKnown RBP9.19□□□□□ -0.94
VBP1-204ENST00000625964 TESPA1A2RU30 521 aaPredicted RBP9.18□□□□□ -0.94
VBP1-204ENST00000625964 ZSCAN1Q8NBB4 408 aa9.18□□□□□ -0.94
VBP1-204ENST00000625964 IRF7Q92985 503 aa9.18□□□□□ -0.94
VBP1-204ENST00000625964 GPR37O15354 613 aa9.17□□□□□ -0.94
VBP1-204ENST00000625964 NLRP7Q8WX94 980 aa9.16□□□□□ -0.94
VBP1-204ENST00000625964 PHOX2BQ99453 314 aa9.15□□□□□ -0.94
VBP1-204ENST00000625964 CD46P15529 392 aa9.15□□□□□ -0.95
VBP1-204ENST00000625964 SKOR1P84550 965 aa9.15□□□□□ -0.95
VBP1-204ENST00000625964 CCDC24Q8N4L8 307 aa9.15□□□□□ -0.95
VBP1-204ENST00000625964 GMPRP36959 345 aa9.14□□□□□ -0.95
VBP1-204ENST00000625964 USP46P62068 366 aa9.14□□□□□ -0.95
VBP1-204ENST00000625964 KDM4AO75164 1064 aa9.13□□□□□ -0.95
VBP1-204ENST00000625964 ALDH1A1P00352 501 aa9.13□□□□□ -0.95
VBP1-204ENST00000625964 LORP23490 312 aaPredicted RBP9.12□□□□□ -0.95
VBP1-204ENST00000625964 H3BM21 787 aa9.1□□□□□ -0.95
VBP1-204ENST00000625964 CAPN5O15484 640 aaPredicted RBP9.1□□□□□ -0.95
VBP1-204ENST00000625964 SIAH2O43255 324 aa9.1□□□□□ -0.95
VBP1-204ENST00000625964 TRIM46Q7Z4K8 759 aa9.09□□□□□ -0.95
VBP1-204ENST00000625964 WASF2Q9Y6W5 498 aa9.09□□□□□ -0.95
VBP1-204ENST00000625964 JUNDP17535 347 aa9.08□□□□□ -0.96
VBP1-204ENST00000625964 EHBP1Q8NDI1 1231 aa9.07□□□□□ -0.96
VBP1-204ENST00000625964 BMP1P13497 986 aa9.05□□□□□ -0.96
VBP1-204ENST00000625964 HOXA2O43364 376 aa9.04□□□□□ -0.96
VBP1-204ENST00000625964 GPIHBP1Q8IV16 184 aa9.04□□□□□ -0.96
VBP1-204ENST00000625964 NUDT12Q9BQG2 462 aa9.04□□□□□ -0.96
VBP1-204ENST00000625964 VEGFBP49765 207 aa9.01□□□□□ -0.97
VBP1-204ENST00000625964 RETREG3Q86VR2 466 aa9.01□□□□□ -0.97
VBP1-204ENST00000625964 ZFP42Q96MM3 310 aa9.01□□□□□ -0.97
VBP1-204ENST00000625964 ERBB4Q15303 1308 aa9.01□□□□□ -0.97
VBP1-204ENST00000625964 MAP2K5Q13163 448 aa9□□□□□ -0.97
VBP1-204ENST00000625964 MPNDQ8N594 471 aa9□□□□□ -0.97
VBP1-204ENST00000625964 HLA-CQ95604 372 aa9□□□□□ -0.97
VBP1-204ENST00000625964 PLEKHG3A1L390 1219 aa9□□□□□ -0.97
VBP1-204ENST00000625964 PTCRAQ6ISU1 281 aaPredicted RBP9□□□□□ -0.97
VBP1-204ENST00000625964 VSIG8P0DPA2 414 aa8.99□□□□□ -0.97
VBP1-204ENST00000625964 SH3BP2P78314 561 aa8.99□□□□□ -0.97
VBP1-204ENST00000625964 SCARF1Q14162 830 aa8.98□□□□□ -0.97
VBP1-204ENST00000625964 CCNYL3P0C7X3 344 aa8.96□□□□□ -0.97
VBP1-204ENST00000625964 MDM2Q00987 491 aaPredicted RBP8.96□□□□□ -0.97
VBP1-204ENST00000625964 MRPL14Q6P1L8 145 aaKnown RBP8.96□□□□□ -0.97
VBP1-204ENST00000625964 IRF6O14896 467 aa8.95□□□□□ -0.98
VBP1-204ENST00000625964 VARSP26640 1264 aaKnown RBP8.95□□□□□ -0.98
VBP1-204ENST00000625964 KCNMA1Q12791 1236 aa8.95□□□□□ -0.98
VBP1-204ENST00000625964 MS4A1P11836 297 aa8.95□□□□□ -0.98
VBP1-204ENST00000625964 GUCA2AQ02747 115 aa8.95□□□□□ -0.98
VBP1-204ENST00000625964 NUTM1Q86Y26 1132 aa8.95□□□□□ -0.98
VBP1-204ENST00000625964 SYMPKQ92797 1274 aaKnown RBP8.95□□□□□ -0.98
VBP1-204ENST00000625964 MINK1Q8N4C8 1332 aaPredicted RBP8.94□□□□□ -0.98
VBP1-204ENST00000625964 PTPRNQ16849 979 aa8.94□□□□□ -0.98
VBP1-204ENST00000625964 EVA1BQ9NVM1 165 aa8.94□□□□□ -0.98
VBP1-204ENST00000625964 NNTQ13423 1086 aa8.93□□□□□ -0.98
VBP1-204ENST00000625964 CLCN1P35523 988 aa8.92□□□□□ -0.98
VBP1-204ENST00000625964 UNC93B1Q9H1C4 597 aa8.92□□□□□ -0.98
VBP1-204ENST00000625964 GPCPD1Q9NPB8 672 aa8.92□□□□□ -0.98
VBP1-204ENST00000625964 ADH1CP00326 375 aa8.91□□□□□ -0.98
VBP1-204ENST00000625964 FDX1P10109 184 aa8.9□□□□□ -0.98
VBP1-204ENST00000625964 BAP1Q92560 729 aa8.9□□□□□ -0.98
VBP1-204ENST00000625964 FAM217BQ9NTX9 383 aaPredicted RBP8.9□□□□□ -0.98
VBP1-204ENST00000625964 TLL2Q9Y6L7 1015 aa8.9□□□□□ -0.98
VBP1-204ENST00000625964 C6orf229H3BNL8 230 aa8.9□□□□□ -0.99
VBP1-204ENST00000625964 TIMP2P16035 220 aa8.9□□□□□ -0.99
VBP1-204ENST00000625964 KCNH2Q12809 1159 aa8.9□□□□□ -0.99
VBP1-204ENST00000625964 ZNF511Q8NB15 262 aa8.9□□□□□ -0.99
VBP1-204ENST00000625964 PURBQ96QR8 312 aaKnown RBP8.9□□□□□ -0.99
VBP1-204ENST00000625964 WDR4P57081 412 aaKnown RBP8.89□□□□□ -0.99
VBP1-204ENST00000625964 LINC01559Q495D7 138 aa8.87□□□□□ -0.99
VBP1-204ENST00000625964 DESI1Q6ICB0 168 aa8.87□□□□□ -0.99
VBP1-204ENST00000625964 FAM174AQ8TBP5 190 aa8.86□□□□□ -0.99
VBP1-204ENST00000625964 KLF16Q9BXK1 252 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms