RNA–Protein interactions for RNA: ENST00000625521.2

UBAP1-204, Transcript of ubiquitin associated protein 1, humanhuman

TSL 2 BASIC

Gene UBAP1, Length 2,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-204ENST00000625521 SAFB2Q14151 953 aaKnown RBP eCLIP27.06■■□□□ 1.92
UBAP1-204ENST00000625521 PLEKHG1Q9ULL1 1385 aa27.05■■□□□ 1.92
UBAP1-204ENST00000625521 SLIT1O75093 1534 aa27.05■■□□□ 1.92
UBAP1-204ENST00000625521 ARHGAP23Q9P227 1491 aa27.03■■□□□ 1.92
UBAP1-204ENST00000625521 METP08581 1390 aa27.03■■□□□ 1.92
UBAP1-204ENST00000625521 PLPPR3Q6T4P5 718 aa27.03■■□□□ 1.92
UBAP1-204ENST00000625521 EID1Q9Y6B2 187 aa27.03■■□□□ 1.92
UBAP1-204ENST00000625521 NINLQ9Y2I6 1382 aa27.03■■□□□ 1.92
UBAP1-204ENST00000625521 CARD14Q9BXL6 1004 aa27.02■■□□□ 1.92
UBAP1-204ENST00000625521 THEMISQ8N1K5 641 aaPredicted RBP27.02■■□□□ 1.92
UBAP1-204ENST00000625521 SLC12A5Q9H2X9 1139 aa27.02■■□□□ 1.92
UBAP1-204ENST00000625521 LTKP29376 864 aa27■■□□□ 1.91
UBAP1-204ENST00000625521 TXNDC2Q86VQ3 553 aa27■■□□□ 1.91
UBAP1-204ENST00000625521 MINK1Q8N4C8 1332 aaPredicted RBP27■■□□□ 1.91
UBAP1-204ENST00000625521 SMG6Q86US8 1419 aaKnown RBP27■■□□□ 1.91
UBAP1-204ENST00000625521 CABP2Q9NPB3 220 aa27■■□□□ 1.91
UBAP1-204ENST00000625521 RIMS1Q86UR5 1692 aaKnown RBP27■■□□□ 1.91
UBAP1-204ENST00000625521 ATAD2Q6PL18 1390 aa27■■□□□ 1.91
UBAP1-204ENST00000625521 TECPR2O15040 1411 aa27■■□□□ 1.91
UBAP1-204ENST00000625521 SIRT1Q96EB6 747 aa26.99■■□□□ 1.91
UBAP1-204ENST00000625521 ADAMTS13Q76LX8 1427 aa26.99■■□□□ 1.91
UBAP1-204ENST00000625521 SRPK2P78362 688 aaKnown RBP26.99■■□□□ 1.91
UBAP1-204ENST00000625521 ADAMTSL3P82987 1691 aa26.98■■□□□ 1.91
UBAP1-204ENST00000625521 KNDC1Q76NI1 1749 aa26.97■■□□□ 1.91
UBAP1-204ENST00000625521 ANKRD36BQ8N2N9 1353 aa26.97■■□□□ 1.91
UBAP1-204ENST00000625521 FAM135BQ49AJ0 1406 aa26.97■■□□□ 1.91
UBAP1-204ENST00000625521 NSD3Q9BZ95 1437 aa26.96■■□□□ 1.91
UBAP1-204ENST00000625521 PPP2R1AP30153 589 aa26.95■■□□□ 1.91
UBAP1-204ENST00000625521 PPP4R2Q9NY27 417 aa26.95■■□□□ 1.9
UBAP1-204ENST00000625521 RBM19Q9Y4C8 960 aaKnown RBP26.95■■□□□ 1.9
UBAP1-204ENST00000625521 WAPLQ7Z5K2 1190 aa26.94■■□□□ 1.9
UBAP1-204ENST00000625521 CPS1P31327 1500 aa26.94■■□□□ 1.9
UBAP1-204ENST00000625521 MED14O60244 1454 aa26.94■■□□□ 1.9
UBAP1-204ENST00000625521 USP32Q8NFA0 1604 aa26.93■■□□□ 1.9
UBAP1-204ENST00000625521 PLEKHH1Q9ULM0 1364 aa26.93■■□□□ 1.9
UBAP1-204ENST00000625521 CEP170BQ9Y4F5 1589 aaPredicted RBP26.93■■□□□ 1.9
UBAP1-204ENST00000625521 CDK19Q9BWU1 502 aa26.92■■□□□ 1.9
UBAP1-204ENST00000625521 MYT1Q01538 1121 aa26.91■■□□□ 1.9
UBAP1-204ENST00000625521 INSRP06213 1382 aa26.91■■□□□ 1.9
UBAP1-204ENST00000625521 NUDCQ9Y266 331 aa26.9■■□□□ 1.9
UBAP1-204ENST00000625521 CGNL1Q0VF96 1302 aa26.88■■□□□ 1.89
UBAP1-204ENST00000625521 TBX22Q9Y458 520 aa26.87■■□□□ 1.89
UBAP1-204ENST00000625521 NSD2O96028 1365 aa26.86■■□□□ 1.89
UBAP1-204ENST00000625521 DIP2AQ14689 1571 aa26.86■■□□□ 1.89
UBAP1-204ENST00000625521 TERF2IPQ9NYB0 399 aa26.86■■□□□ 1.89
UBAP1-204ENST00000625521 RNF123Q5XPI4 1314 aa26.86■■□□□ 1.89
UBAP1-204ENST00000625521 A0A1W2PP64 1363 aa26.85■■□□□ 1.89
UBAP1-204ENST00000625521 WASLO00401 505 aaPredicted RBP26.83■■□□□ 1.89
UBAP1-204ENST00000625521 ZNF142P52746 1687 aaPredicted RBP26.83■■□□□ 1.89
UBAP1-204ENST00000625521 SLC26A8Q96RN1 970 aa26.83■■□□□ 1.89
UBAP1-204ENST00000625521 ROBO2Q9HCK4 1378 aa26.82■■□□□ 1.88
UBAP1-204ENST00000625521 MORC1Q86VD1 984 aa26.82■■□□□ 1.88
UBAP1-204ENST00000625521 CD163L1Q9NR16 1453 aa26.81■■□□□ 1.88
UBAP1-204ENST00000625521 HDGFL2Q7Z4V5 671 aaPredicted RBP26.8■■□□□ 1.88
UBAP1-204ENST00000625521 BLMP54132 1417 aaPredicted RBP26.79■■□□□ 1.88
UBAP1-204ENST00000625521 PTPRUQ92729 1446 aa26.79■■□□□ 1.88
UBAP1-204ENST00000625521 SENP3-EIF4A1A0A087X0R7 540 aa26.78■■□□□ 1.88
UBAP1-204ENST00000625521 CABP1Q9NZU7 370 aa26.78■■□□□ 1.88
UBAP1-204ENST00000625521 ATP7BP35670 1465 aa26.78■■□□□ 1.88
UBAP1-204ENST00000625521 B4GALNT3Q6L9W6 998 aa26.77■■□□□ 1.88
UBAP1-204ENST00000625521 WDR43Q15061 677 aaKnown RBP eCLIP26.76■■□□□ 1.87
UBAP1-204ENST00000625521 ADGRB2O60241 1585 aa26.75■■□□□ 1.87
UBAP1-204ENST00000625521 PTCH1Q13635 1447 aa26.75■■□□□ 1.87
UBAP1-204ENST00000625521 ANKLE2Q86XL3 938 aa26.75■■□□□ 1.87
UBAP1-204ENST00000625521 AMOTL2Q9Y2J4 779 aa26.75■■□□□ 1.87
UBAP1-204ENST00000625521 PIK3R4Q99570 1358 aa26.74■■□□□ 1.87
UBAP1-204ENST00000625521 POLR3AO14802 1390 aaPredicted RBP26.73■■□□□ 1.87
UBAP1-204ENST00000625521 SETD1BQ9UPS6 1966 aaKnown RBP26.73■■□□□ 1.87
UBAP1-204ENST00000625521 ADAMTS8Q9UP79 889 aa26.72■■□□□ 1.87
UBAP1-204ENST00000625521 PPIP5K1Q6PFW1 1433 aa26.71■■□□□ 1.87
UBAP1-204ENST00000625521 NUDT16Q96DE0 195 aaKnown RBP26.7■■□□□ 1.87
UBAP1-204ENST00000625521 CCDC61Q9Y6R9 512 aa26.7■■□□□ 1.86
UBAP1-204ENST00000625521 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.68■■□□□ 1.86
UBAP1-204ENST00000625521 CPSF1Q10570 1443 aaKnown RBP26.67■■□□□ 1.86
UBAP1-204ENST00000625521 XRN1Q8IZH2 1706 aaKnown RBP26.67■■□□□ 1.86
UBAP1-204ENST00000625521 FYB1O15117 783 aa26.66■■□□□ 1.86
UBAP1-204ENST00000625521 TNNT2P45379 298 aaPredicted RBP26.66■■□□□ 1.86
UBAP1-204ENST00000625521 ANP32EQ9BTT0 268 aa26.66■■□□□ 1.86
UBAP1-204ENST00000625521 CDC42BPGQ6DT37 1551 aa26.64■■□□□ 1.86
UBAP1-204ENST00000625521 ANKRD26Q9UPS8 1709 aa26.63■■□□□ 1.85
UBAP1-204ENST00000625521 GGNBP2Q9H3C7 697 aa26.63■■□□□ 1.85
UBAP1-204ENST00000625521 EDC4Q6P2E9 1401 aaKnown RBP26.63■■□□□ 1.85
UBAP1-204ENST00000625521 PDE3BQ13370 1112 aa26.63■■□□□ 1.85
UBAP1-204ENST00000625521 PRR36Q9H6K5 1346 aa26.62■■□□□ 1.85
UBAP1-204ENST00000625521 CFAP53Q96M91 514 aa26.61■■□□□ 1.85
UBAP1-204ENST00000625521 MTHFSP49914 203 aa26.61■■□□□ 1.85
UBAP1-204ENST00000625521 ZNF692Q9BU19 519 aaPredicted RBP26.6■■□□□ 1.85
UBAP1-204ENST00000625521 FANCIQ9NVI1 1328 aa26.59■■□□□ 1.85
UBAP1-204ENST00000625521 KIF20BQ96Q89 1820 aa26.59■■□□□ 1.85
UBAP1-204ENST00000625521 KCNA6P17658 529 aa26.58■■□□□ 1.85
UBAP1-204ENST00000625521 TOPAZ1Q8N9V7 1692 aa26.57■■□□□ 1.84
UBAP1-204ENST00000625521 NCKAP5LQ9HCH0 1330 aa26.56■■□□□ 1.84
UBAP1-204ENST00000625521 NPHP4O75161 1426 aaPredicted RBP26.56■■□□□ 1.84
UBAP1-204ENST00000625521 PLEKHG3A1L390 1219 aa26.55■■□□□ 1.84
UBAP1-204ENST00000625521 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.55■■□□□ 1.84
UBAP1-204ENST00000625521 SALL2Q9Y467 1007 aaPredicted RBP26.55■■□□□ 1.84
UBAP1-204ENST00000625521 MSH5O43196 834 aa26.55■■□□□ 1.84
UBAP1-204ENST00000625521 MON2Q7Z3U7 1717 aa26.55■■□□□ 1.84
UBAP1-204ENST00000625521 SHPRHQ149N8 1683 aa26.54■■□□□ 1.84
UBAP1-204ENST00000625521 AKAP12Q02952 1782 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms