RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 RBM6P78332 1123 aaKnown RBP28.33■■■□□ 2.13
SMN1-211ENST00000625245 ESCO1Q5FWF5 840 aa28.32■■■□□ 2.12
SMN1-211ENST00000625245 MPHOSPH9Q99550 1183 aa28.32■■■□□ 2.12
SMN1-211ENST00000625245 WAPLQ7Z5K2 1190 aa28.28■■■□□ 2.12
SMN1-211ENST00000625245 ANKRD30BQ9BXX2 1392 aa28.26■■■□□ 2.12
SMN1-211ENST00000625245 NUTM2FA1L443 756 aa28.26■■■□□ 2.11
SMN1-211ENST00000625245 TMEM132EQ6IEE7 984 aa28.26■■■□□ 2.11
SMN1-211ENST00000625245 RGS12O14924 1447 aa28.26■■■□□ 2.11
SMN1-211ENST00000625245 SPATA31E1Q6ZUB1 1445 aa28.26■■■□□ 2.11
SMN1-211ENST00000625245 NPHP3Q7Z494 1330 aa28.25■■■□□ 2.11
SMN1-211ENST00000625245 USP21Q9UK80 565 aa28.25■■■□□ 2.11
SMN1-211ENST00000625245 CDC42BPGQ6DT37 1551 aa28.24■■■□□ 2.11
SMN1-211ENST00000625245 IFT172Q9UG01 1749 aa28.24■■■□□ 2.11
SMN1-211ENST00000625245 XPCQ01831 940 aaPredicted RBP28.24■■■□□ 2.11
SMN1-211ENST00000625245 FOXO3O43524 673 aa28.23■■■□□ 2.11
SMN1-211ENST00000625245 LRPPRCP42704 1394 aaKnown RBP28.23■■■□□ 2.11
SMN1-211ENST00000625245 TRPC5Q9UL62 973 aaPredicted RBP28.19■■■□□ 2.1
SMN1-211ENST00000625245 ABCC11Q96J66 1382 aa28.19■■■□□ 2.1
SMN1-211ENST00000625245 PLEKHH1Q9ULM0 1364 aa28.19■■■□□ 2.1
SMN1-211ENST00000625245 TECPR2O15040 1411 aa28.18■■■□□ 2.1
SMN1-211ENST00000625245 COL22A1Q8NFW1 1626 aaPredicted RBP28.18■■■□□ 2.1
SMN1-211ENST00000625245 FNBP4Q8N3X1 1017 aaPredicted RBP28.17■■■□□ 2.1
SMN1-211ENST00000625245 PXDNQ92626 1479 aa28.16■■■□□ 2.1
SMN1-211ENST00000625245 PIK3C2GO75747 1445 aa28.16■■■□□ 2.1
SMN1-211ENST00000625245 KNDC1Q76NI1 1749 aa28.15■■■□□ 2.1
SMN1-211ENST00000625245 YTHDC2Q9H6S0 1430 aaKnown RBP28.14■■■□□ 2.1
SMN1-211ENST00000625245 MYOM2P54296 1465 aa28.13■■■□□ 2.09
SMN1-211ENST00000625245 ATRNO75882 1429 aa28.1■■■□□ 2.09
SMN1-211ENST00000625245 FMN2Q9NZ56 1722 aa28.1■■■□□ 2.09
SMN1-211ENST00000625245 MARF1Q9Y4F3 1742 aaKnown RBP28.1■■■□□ 2.09
SMN1-211ENST00000625245 C14orf93Q9H972 538 aaKnown RBP28.1■■■□□ 2.09
SMN1-211ENST00000625245 CFAP70Q5T0N1 1121 aa28.09■■■□□ 2.09
SMN1-211ENST00000625245 ACIN1Q9UKV3 1341 aaKnown RBP28.09■■■□□ 2.09
SMN1-211ENST00000625245 ATAD2Q6PL18 1390 aa28.08■■■□□ 2.09
SMN1-211ENST00000625245 KRT28Q7Z3Y7 464 aa28.06■■■□□ 2.08
SMN1-211ENST00000625245 SIRT1Q96EB6 747 aa28.06■■■□□ 2.08
SMN1-211ENST00000625245 DHX57Q6P158 1386 aaKnown RBP28.06■■■□□ 2.08
SMN1-211ENST00000625245 RGPD8O14715 1765 aaPredicted RBP28.06■■■□□ 2.08
SMN1-211ENST00000625245 SAFB2Q14151 953 aaKnown RBP eCLIP28.05■■■□□ 2.08
SMN1-211ENST00000625245 BCL9LQ86UU0 1499 aa28.05■■■□□ 2.08
SMN1-211ENST00000625245 KIF1AQ12756 1690 aa28.04■■■□□ 2.08
SMN1-211ENST00000625245 SPATA31A3Q5VYP0 1347 aa28.04■■■□□ 2.08
SMN1-211ENST00000625245 PHF8Q9UPP1 1060 aa28.02■■■□□ 2.08
SMN1-211ENST00000625245 PLEKHG5O94827 1062 aa28.01■■■□□ 2.07
SMN1-211ENST00000625245 PRAM1Q96QH2 718 aa28.01■■■□□ 2.07
SMN1-211ENST00000625245 HAP1P54257 671 aaPredicted RBP28■■■□□ 2.07
SMN1-211ENST00000625245 GJD4Q96KN9 370 aaPredicted RBP28■■■□□ 2.07
SMN1-211ENST00000625245 NRXN1Q9ULB1 1477 aa28■■■□□ 2.07
SMN1-211ENST00000625245 PSME1Q06323 249 aa27.99■■■□□ 2.07
SMN1-211ENST00000625245 POGKQ9P215 609 aa27.99■■■□□ 2.07
SMN1-211ENST00000625245 RAB3GAP2Q9H2M9 1393 aa27.98■■■□□ 2.07
SMN1-211ENST00000625245 LMOD2Q6P5Q4 547 aa27.97■■■□□ 2.07
SMN1-211ENST00000625245 UNC5CLQ8IV45 518 aa27.97■■■□□ 2.07
SMN1-211ENST00000625245 CABLES1Q8TDN4 633 aa27.95■■■□□ 2.06
SMN1-211ENST00000625245 TNS3Q68CZ2 1445 aa27.93■■■□□ 2.06
SMN1-211ENST00000625245 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.93■■■□□ 2.06
SMN1-211ENST00000625245 PMFBP1Q8TBY8 1022 aa27.92■■■□□ 2.06
SMN1-211ENST00000625245 KDM2AQ9Y2K7 1162 aa27.92■■■□□ 2.06
SMN1-211ENST00000625245 USP32Q8NFA0 1604 aa27.92■■■□□ 2.06
SMN1-211ENST00000625245 SLIT2O94813 1529 aa27.92■■■□□ 2.06
SMN1-211ENST00000625245 TRAK1Q9UPV9 953 aa27.9■■■□□ 2.06
SMN1-211ENST00000625245 RALGAPBQ86X10 1494 aa27.89■■■□□ 2.06
SMN1-211ENST00000625245 DLC1Q96QB1 1528 aa27.88■■■□□ 2.05
SMN1-211ENST00000625245 HIRIP3Q9BW71 556 aaPredicted RBP27.88■■■□□ 2.05
SMN1-211ENST00000625245 SBNO1A3KN83 1393 aa27.87■■■□□ 2.05
SMN1-211ENST00000625245 GLI3P10071 1580 aa27.87■■■□□ 2.05
SMN1-211ENST00000625245 CCDC125Q86Z20 511 aa27.87■■■□□ 2.05
SMN1-211ENST00000625245 DCAF11Q8TEB1 546 aa27.87■■■□□ 2.05
SMN1-211ENST00000625245 CCDC9Q9Y3X0 531 aaKnown RBP27.86■■■□□ 2.05
SMN1-211ENST00000625245 ZRANB1Q9UGI0 708 aa27.85■■■□□ 2.05
SMN1-211ENST00000625245 MINK1Q8N4C8 1332 aaPredicted RBP27.85■■■□□ 2.05
SMN1-211ENST00000625245 ARHGEF10O15013 1369 aa27.85■■■□□ 2.05
SMN1-211ENST00000625245 ANKARQ7Z5J8 1434 aa27.84■■■□□ 2.05
SMN1-211ENST00000625245 ADGRB1O14514 1584 aa27.83■■■□□ 2.05
SMN1-211ENST00000625245 VPS72Q15906 364 aa27.82■■■□□ 2.04
SMN1-211ENST00000625245 BRWD3Q6RI45 1802 aa27.82■■■□□ 2.04
SMN1-211ENST00000625245 PLCH1Q4KWH8 1693 aa27.81■■■□□ 2.04
SMN1-211ENST00000625245 EP400Q96L91 3159 aa27.81■■■□□ 2.04
SMN1-211ENST00000625245 SEPT12Q8IYM1 358 aa27.81■■■□□ 2.04
SMN1-211ENST00000625245 ADGRB2O60241 1585 aa27.81■■■□□ 2.04
SMN1-211ENST00000625245 ABCA3Q99758 1704 aa27.81■■■□□ 2.04
SMN1-211ENST00000625245 NWD2Q9ULI1 1742 aa27.79■■■□□ 2.04
SMN1-211ENST00000625245 FAM83GA6ND36 823 aa27.79■■■□□ 2.04
SMN1-211ENST00000625245 GPRASP1Q5JY77 1395 aa27.78■■■□□ 2.04
SMN1-211ENST00000625245 EIF3AQ14152 1382 aaKnown RBP27.76■■■□□ 2.03
SMN1-211ENST00000625245 PRR36Q9H6K5 1346 aa27.76■■■□□ 2.03
SMN1-211ENST00000625245 WASLO00401 505 aaPredicted RBP27.76■■■□□ 2.03
SMN1-211ENST00000625245 NGDNQ8NEJ9 315 aaKnown RBP27.75■■■□□ 2.03
SMN1-211ENST00000625245 A0A0G2JS52 829 aa27.74■■■□□ 2.03
SMN1-211ENST00000625245 MYT1Q01538 1121 aa27.74■■■□□ 2.03
SMN1-211ENST00000625245 STAC3Q96MF2 364 aa27.74■■■□□ 2.03
SMN1-211ENST00000625245 TRPM3Q9HCF6 1732 aaPredicted RBP27.74■■■□□ 2.03
SMN1-211ENST00000625245 BLMP54132 1417 aaPredicted RBP27.74■■■□□ 2.03
SMN1-211ENST00000625245 SF3B2Q13435 895 aaKnown RBP27.73■■■□□ 2.03
SMN1-211ENST00000625245 TULP4Q9NRJ4 1543 aa27.72■■■□□ 2.03
SMN1-211ENST00000625245 PAK3O75914 559 aaPredicted RBP27.72■■■□□ 2.03
SMN1-211ENST00000625245 ONECUT3O60422 494 aaPredicted RBP27.71■■■□□ 2.03
SMN1-211ENST00000625245 BTG4Q9NY30 223 aa27.71■■■□□ 2.03
SMN1-211ENST00000625245 KRT27Q7Z3Y8 459 aa27.7■■■□□ 2.02
SMN1-211ENST00000625245 DEFB132Q7Z7B7 95 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms