RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 DCAF11Q8TEB1 546 aa26.28■■□□□ 1.8
SCAMP4-213ENST00000621748 LAMC1P11047 1609 aa26.27■■□□□ 1.8
SCAMP4-213ENST00000621748 SHPRHQ149N8 1683 aa26.26■■□□□ 1.79
SCAMP4-213ENST00000621748 DHX57Q6P158 1386 aaKnown RBP26.26■■□□□ 1.79
SCAMP4-213ENST00000621748 CDC42BPGQ6DT37 1551 aa26.25■■□□□ 1.79
SCAMP4-213ENST00000621748 SPATA31A6Q5VVP1 1343 aa26.25■■□□□ 1.79
SCAMP4-213ENST00000621748 SIRT1Q96EB6 747 aa26.25■■□□□ 1.79
SCAMP4-213ENST00000621748 LRP6O75581 1613 aa26.23■■□□□ 1.79
SCAMP4-213ENST00000621748 LRRC59Q96AG4 307 aaKnown RBP26.22■■□□□ 1.79
SCAMP4-213ENST00000621748 NUTM2FA1L443 756 aa26.2■■□□□ 1.78
SCAMP4-213ENST00000621748 POTEAQ6S8J7 498 aa26.2■■□□□ 1.78
SCAMP4-213ENST00000621748 STAC3Q96MF2 364 aa26.2■■□□□ 1.78
SCAMP4-213ENST00000621748 ESCO1Q5FWF5 840 aa26.19■■□□□ 1.78
SCAMP4-213ENST00000621748 ADGRB1O14514 1584 aa26.19■■□□□ 1.78
SCAMP4-213ENST00000621748 PRAM1Q96QH2 718 aa26.17■■□□□ 1.78
SCAMP4-213ENST00000621748 SOS2Q07890 1332 aaPredicted RBP26.16■■□□□ 1.78
SCAMP4-213ENST00000621748 NUTM2BA6NNL0 878 aaPredicted RBP26.16■■□□□ 1.78
SCAMP4-213ENST00000621748 NUTM2EB1AL46 878 aaPredicted RBP26.16■■□□□ 1.78
SCAMP4-213ENST00000621748 NUTM2AQ8IVF1 878 aaPredicted RBP26.16■■□□□ 1.78
SCAMP4-213ENST00000621748 SAFB2Q14151 953 aaKnown RBP eCLIP26.15■■□□□ 1.78
SCAMP4-213ENST00000621748 MEX3CQ5U5Q3 659 aaKnown RBP26.15■■□□□ 1.78
SCAMP4-213ENST00000621748 PNPLA6Q8IY17 1366 aa26.15■■□□□ 1.78
SCAMP4-213ENST00000621748 FMN2Q9NZ56 1722 aa26.14■■□□□ 1.78
SCAMP4-213ENST00000621748 TRAK1Q9UPV9 953 aa26.14■■□□□ 1.78
SCAMP4-213ENST00000621748 DLC1Q96QB1 1528 aa26.14■■□□□ 1.77
SCAMP4-213ENST00000621748 POGKQ9P215 609 aa26.12■■□□□ 1.77
SCAMP4-213ENST00000621748 FOXO3O43524 673 aa26.11■■□□□ 1.77
SCAMP4-213ENST00000621748 NPHP3Q7Z494 1330 aa26.1■■□□□ 1.77
SCAMP4-213ENST00000621748 RGPD8O14715 1765 aaPredicted RBP26.09■■□□□ 1.77
SCAMP4-213ENST00000621748 XPCQ01831 940 aaPredicted RBP26.07■■□□□ 1.76
SCAMP4-213ENST00000621748 PXDNQ92626 1479 aa26.06■■□□□ 1.76
SCAMP4-213ENST00000621748 ZNF772Q68DY9 489 aaPredicted RBP26.03■■□□□ 1.76
SCAMP4-213ENST00000621748 SIN3AQ96ST3 1273 aa26.03■■□□□ 1.76
SCAMP4-213ENST00000621748 HIRIP3Q9BW71 556 aaPredicted RBP26.03■■□□□ 1.76
SCAMP4-213ENST00000621748 MINK1Q8N4C8 1332 aaPredicted RBP26.02■■□□□ 1.76
SCAMP4-213ENST00000621748 ADGRB2O60241 1585 aa26.01■■□□□ 1.75
SCAMP4-213ENST00000621748 KIF1AQ12756 1690 aa26.01■■□□□ 1.75
SCAMP4-213ENST00000621748 AFF2P51816 1311 aa26■■□□□ 1.75
SCAMP4-213ENST00000621748 ADAMTS2O95450 1211 aa26■■□□□ 1.75
SCAMP4-213ENST00000621748 PHF8Q9UPP1 1060 aa26■■□□□ 1.75
SCAMP4-213ENST00000621748 ARHGEF28Q8N1W1 1705 aaKnown RBP26■■□□□ 1.75
SCAMP4-213ENST00000621748 KIAA1210Q9ULL0 1709 aa26■■□□□ 1.75
SCAMP4-213ENST00000621748 NBPF1Q3BBV0 1214 aa25.99■■□□□ 1.75
SCAMP4-213ENST00000621748 C8orf37Q96NL8 207 aa25.99■■□□□ 1.75
SCAMP4-213ENST00000621748 USP32Q8NFA0 1604 aa25.99■■□□□ 1.75
SCAMP4-213ENST00000621748 COL22A1Q8NFW1 1626 aaPredicted RBP25.99■■□□□ 1.75
SCAMP4-213ENST00000621748 L3MBTL2Q969R5 705 aa25.98■■□□□ 1.75
SCAMP4-213ENST00000621748 KRT28Q7Z3Y7 464 aa25.97■■□□□ 1.75
SCAMP4-213ENST00000621748 ANKARQ7Z5J8 1434 aa25.96■■□□□ 1.75
SCAMP4-213ENST00000621748 WASLO00401 505 aaPredicted RBP25.95■■□□□ 1.74
SCAMP4-213ENST00000621748 NEUROD1Q13562 356 aa25.95■■□□□ 1.74
SCAMP4-213ENST00000621748 SPATA31A3Q5VYP0 1347 aa25.94■■□□□ 1.74
SCAMP4-213ENST00000621748 TRIM26Q12899 539 aaPredicted RBP25.94■■□□□ 1.74
SCAMP4-213ENST00000621748 PMFBP1Q8TBY8 1022 aa25.94■■□□□ 1.74
SCAMP4-213ENST00000621748 NGLY1Q96IV0 654 aa25.94■■□□□ 1.74
SCAMP4-213ENST00000621748 PRR36Q9H6K5 1346 aa25.93■■□□□ 1.74
SCAMP4-213ENST00000621748 TULP4Q9NRJ4 1543 aa25.9■■□□□ 1.74
SCAMP4-213ENST00000621748 RXRBP28702 533 aa25.9■■□□□ 1.74
SCAMP4-213ENST00000621748 PSME1Q06323 249 aa25.9■■□□□ 1.74
SCAMP4-213ENST00000621748 EIF3AQ14152 1382 aaKnown RBP25.88■■□□□ 1.73
SCAMP4-213ENST00000621748 QTRT2Q9H974 415 aaKnown RBP25.88■■□□□ 1.73
SCAMP4-213ENST00000621748 FNBP4Q8N3X1 1017 aaPredicted RBP25.86■■□□□ 1.73
SCAMP4-213ENST00000621748 TNS3Q68CZ2 1445 aa25.86■■□□□ 1.73
SCAMP4-213ENST00000621748 SBNO1A3KN83 1393 aa25.85■■□□□ 1.73
SCAMP4-213ENST00000621748 MARF1Q9Y4F3 1742 aaKnown RBP25.85■■□□□ 1.73
SCAMP4-213ENST00000621748 CDK19Q9BWU1 502 aa25.84■■□□□ 1.73
SCAMP4-213ENST00000621748 USP21Q9UK80 565 aa25.84■■□□□ 1.73
SCAMP4-213ENST00000621748 NUDT16Q96DE0 195 aaKnown RBP25.83■■□□□ 1.73
SCAMP4-213ENST00000621748 ATP7BP35670 1465 aa25.81■■□□□ 1.72
SCAMP4-213ENST00000621748 RBM6P78332 1123 aaKnown RBP25.81■■□□□ 1.72
SCAMP4-213ENST00000621748 LMOD2Q6P5Q4 547 aa25.81■■□□□ 1.72
SCAMP4-213ENST00000621748 CABLES1Q8TDN4 633 aa25.81■■□□□ 1.72
SCAMP4-213ENST00000621748 TRPM1Q7Z4N2 1603 aa25.8■■□□□ 1.72
SCAMP4-213ENST00000621748 TRPM3Q9HCF6 1732 aaPredicted RBP25.8■■□□□ 1.72
SCAMP4-213ENST00000621748 PLEKHG5O94827 1062 aa25.79■■□□□ 1.72
SCAMP4-213ENST00000621748 NGDNQ8NEJ9 315 aaKnown RBP25.79■■□□□ 1.72
SCAMP4-213ENST00000621748 CENPJQ9HC77 1338 aaPredicted RBP25.79■■□□□ 1.72
SCAMP4-213ENST00000621748 GPRASP1Q5JY77 1395 aa25.79■■□□□ 1.72
SCAMP4-213ENST00000621748 CDK12Q9NYV4 1490 aaPredicted RBP25.79■■□□□ 1.72
SCAMP4-213ENST00000621748 ARHGEF10O15013 1369 aa25.78■■□□□ 1.72
SCAMP4-213ENST00000621748 ITSN1Q15811 1721 aa25.77■■□□□ 1.72
SCAMP4-213ENST00000621748 TRPC5Q9UL62 973 aaPredicted RBP25.77■■□□□ 1.72
SCAMP4-213ENST00000621748 BCL9LQ86UU0 1499 aa25.77■■□□□ 1.72
SCAMP4-213ENST00000621748 NBPF8Q3BBV2 869 aa25.76■■□□□ 1.71
SCAMP4-213ENST00000621748 ALS2Q96Q42 1657 aa25.74■■□□□ 1.71
SCAMP4-213ENST00000621748 ATRNO75882 1429 aa25.74■■□□□ 1.71
SCAMP4-213ENST00000621748 HAP1P54257 671 aaPredicted RBP25.74■■□□□ 1.71
SCAMP4-213ENST00000621748 CCDC61Q9Y6R9 512 aa25.74■■□□□ 1.71
SCAMP4-213ENST00000621748 QRICH2Q9H0J4 1663 aa25.74■■□□□ 1.71
SCAMP4-213ENST00000621748 RGS12O14924 1447 aa25.73■■□□□ 1.71
SCAMP4-213ENST00000621748 ROCK2O75116 1388 aaKnown RBP25.73■■□□□ 1.71
SCAMP4-213ENST00000621748 ABCA3Q99758 1704 aa25.73■■□□□ 1.71
SCAMP4-213ENST00000621748 TOPAZ1Q8N9V7 1692 aa25.72■■□□□ 1.71
SCAMP4-213ENST00000621748 PAK3O75914 559 aaPredicted RBP25.71■■□□□ 1.71
SCAMP4-213ENST00000621748 SLIT2O94813 1529 aa25.71■■□□□ 1.71
SCAMP4-213ENST00000621748 PLEKHG3A1L390 1219 aa25.7■■□□□ 1.7
SCAMP4-213ENST00000621748 SRPK2P78362 688 aaKnown RBP25.7■■□□□ 1.7
SCAMP4-213ENST00000621748 CABP2Q9NPB3 220 aa25.7■■□□□ 1.7
SCAMP4-213ENST00000621748 ACEP12821 1306 aa25.69■■□□□ 1.7
SCAMP4-213ENST00000621748 POLR3AO14802 1390 aaPredicted RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms