RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 ARHGEF40Q8TER5 1519 aa4.31□□□□□ -1.72
U1.39-201ENST00000621562 DLC1Q96QB1 1528 aa4.31□□□□□ -1.72
U1.39-201ENST00000621562 MED14O60244 1454 aa4.3□□□□□ -1.72
U1.39-201ENST00000621562 CD163L1Q9NR16 1453 aa4.3□□□□□ -1.72
U1.39-201ENST00000621562 NSD3Q9BZ95 1437 aa4.3□□□□□ -1.72
U1.39-201ENST00000621562 YEATS2Q9ULM3 1422 aa4.3□□□□□ -1.72
U1.39-201ENST00000621562 TUBGCP6Q96RT7 1819 aa4.3□□□□□ -1.72
U1.39-201ENST00000621562 CFAP70Q5T0N1 1121 aa4.3□□□□□ -1.72
U1.39-201ENST00000621562 C20orf194Q5TEA3 1177 aa4.3□□□□□ -1.72
U1.39-201ENST00000621562 CRBNQ96SW2 442 aa4.3□□□□□ -1.72
U1.39-201ENST00000621562 ALKQ9UM73 1620 aa4.3□□□□□ -1.72
U1.39-201ENST00000621562 CACNA1FO60840 1977 aa4.3□□□□□ -1.72
U1.39-201ENST00000621562 AGLP35573 1532 aa4.3□□□□□ -1.72
U1.39-201ENST00000621562 UBR1Q8IWV7 1749 aa4.29□□□□□ -1.72
U1.39-201ENST00000621562 MARF1Q9Y4F3 1742 aaKnown RBP4.29□□□□□ -1.72
U1.39-201ENST00000621562 TCERG1O14776 1098 aaKnown RBP4.29□□□□□ -1.72
U1.39-201ENST00000621562 PLIN1O60240 522 aa4.29□□□□□ -1.72
U1.39-201ENST00000621562 MS4A1P11836 297 aa4.29□□□□□ -1.72
U1.39-201ENST00000621562 SLFN5Q08AF3 891 aa4.29□□□□□ -1.72
U1.39-201ENST00000621562 CDCA8Q53HL2 280 aa4.29□□□□□ -1.72
U1.39-201ENST00000621562 PHF23Q9BUL5 403 aaPredicted RBP4.29□□□□□ -1.72
U1.39-201ENST00000621562 BACH2Q9BYV9 841 aa4.29□□□□□ -1.72
U1.39-201ENST00000621562 SPINK5Q9NQ38 1064 aaPredicted RBP4.29□□□□□ -1.72
U1.39-201ENST00000621562 NOP58Q9Y2X3 529 aaKnown RBP4.29□□□□□ -1.72
U1.39-201ENST00000621562 KNSTRNQ9Y448 316 aa4.29□□□□□ -1.72
U1.39-201ENST00000621562 DMRT2Q9Y5R5 561 aa4.29□□□□□ -1.72
U1.39-201ENST00000621562 LRRC7Q96NW7 1537 aa4.29□□□□□ -1.72
U1.39-201ENST00000621562 RGPD1P0DJD0 1748 aa4.29□□□□□ -1.72
U1.39-201ENST00000621562 CENPJQ9HC77 1338 aaPredicted RBP4.28□□□□□ -1.72
U1.39-201ENST00000621562 RGPD8O14715 1765 aaPredicted RBP4.28□□□□□ -1.72
U1.39-201ENST00000621562 CPS1P31327 1500 aa4.28□□□□□ -1.72
U1.39-201ENST00000621562 SKAP1Q86WV1 359 aa4.28□□□□□ -1.72
U1.39-201ENST00000621562 IPO9Q96P70 1041 aaKnown RBP4.28□□□□□ -1.72
U1.39-201ENST00000621562 C14orf93Q9H972 538 aaKnown RBP4.28□□□□□ -1.72
U1.39-201ENST00000621562 SALL2Q9Y467 1007 aaPredicted RBP4.28□□□□□ -1.72
U1.39-201ENST00000621562 USP54Q70EL1 1684 aa4.28□□□□□ -1.72
U1.39-201ENST00000621562 NSD2O96028 1365 aa4.27□□□□□ -1.73
U1.39-201ENST00000621562 ANKRD36BQ8N2N9 1353 aa4.27□□□□□ -1.73
U1.39-201ENST00000621562 ABCC11Q96J66 1382 aa4.27□□□□□ -1.73
U1.39-201ENST00000621562 NINLQ9Y2I6 1382 aa4.27□□□□□ -1.73
U1.39-201ENST00000621562 RPGRIP1LQ68CZ1 1315 aa4.27□□□□□ -1.73
U1.39-201ENST00000621562 PDE4AP27815 886 aa4.27□□□□□ -1.73
U1.39-201ENST00000621562 AK9Q5TCS8 1911 aa4.27□□□□□ -1.73
U1.39-201ENST00000621562 PEAK1Q9H792 1746 aa4.26□□□□□ -1.73
U1.39-201ENST00000621562 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.26□□□□□ -1.73
U1.39-201ENST00000621562 GOLGA2Q08379 1002 aa4.26□□□□□ -1.73
U1.39-201ENST00000621562 WDR43Q15061 677 aaKnown RBP eCLIP4.26□□□□□ -1.73
U1.39-201ENST00000621562 CCDC146Q8IYE0 955 aa4.26□□□□□ -1.73
U1.39-201ENST00000621562 PUS7Q96PZ0 661 aaKnown RBP4.26□□□□□ -1.73
U1.39-201ENST00000621562 YTHDC2Q9H6S0 1430 aaKnown RBP4.26□□□□□ -1.73
U1.39-201ENST00000621562 A0A1W2PP64 1363 aa4.26□□□□□ -1.73
U1.39-201ENST00000621562 A2ML1A8K2U0 1454 aa4.25□□□□□ -1.73
U1.39-201ENST00000621562 ATP7BP35670 1465 aa4.25□□□□□ -1.73
U1.39-201ENST00000621562 LRRC37A3O60309 1634 aa4.25□□□□□ -1.73
U1.39-201ENST00000621562 APAF1O14727 1248 aa4.25□□□□□ -1.73
U1.39-201ENST00000621562 SLC24A1O60721 1099 aa4.25□□□□□ -1.73
U1.39-201ENST00000621562 C8orf34Q49A92 452 aa4.25□□□□□ -1.73
U1.39-201ENST00000621562 CENPQQ7L2Z9 268 aaPredicted RBP4.25□□□□□ -1.73
U1.39-201ENST00000621562 NGEFQ8N5V2 710 aa4.25□□□□□ -1.73
U1.39-201ENST00000621562 BCL11AQ9H165 835 aa4.25□□□□□ -1.73
U1.39-201ENST00000621562 MYT1LQ9UL68 1186 aa4.25□□□□□ -1.73
U1.39-201ENST00000621562 FAM208AQ9UK61 1670 aaKnown RBP4.25□□□□□ -1.73
U1.39-201ENST00000621562 ZMYM3Q14202 1370 aa4.25□□□□□ -1.73
U1.39-201ENST00000621562 USP19O94966 1318 aa4.24□□□□□ -1.73
U1.39-201ENST00000621562 E9PSI1 815 aa4.24□□□□□ -1.73
U1.39-201ENST00000621562 ANP32AP39687 249 aaKnown RBP4.24□□□□□ -1.73
U1.39-201ENST00000621562 NCBP3Q53F19 620 aaKnown RBP4.24□□□□□ -1.73
U1.39-201ENST00000621562 WWC1Q8IX03 1113 aa4.24□□□□□ -1.73
U1.39-201ENST00000621562 PNPLA6Q8IY17 1366 aa4.24□□□□□ -1.73
U1.39-201ENST00000621562 XRN1Q8IZH2 1706 aaKnown RBP4.24□□□□□ -1.73
U1.39-201ENST00000621562 TECPR2O15040 1411 aa4.23□□□□□ -1.73
U1.39-201ENST00000621562 FAM135BQ49AJ0 1406 aa4.23□□□□□ -1.73
U1.39-201ENST00000621562 FER1L4A9Z1Z3 1794 aa4.23□□□□□ -1.73
U1.39-201ENST00000621562 BCAR3O75815 825 aa4.23□□□□□ -1.73
U1.39-201ENST00000621562 RAPGEF3O95398 923 aa4.23□□□□□ -1.73
U1.39-201ENST00000621562 CCDC27Q2M243 656 aa4.23□□□□□ -1.73
U1.39-201ENST00000621562 TMEM132EQ6IEE7 984 aa4.23□□□□□ -1.73
U1.39-201ENST00000621562 ERICH6Q7L0X2 663 aa4.23□□□□□ -1.73
U1.39-201ENST00000621562 SLC12A5Q9H2X9 1139 aa4.23□□□□□ -1.73
U1.39-201ENST00000621562 TRAK1Q9UPV9 953 aa4.23□□□□□ -1.73
U1.39-201ENST00000621562 TNNQ9UQP3 1299 aa4.23□□□□□ -1.73
U1.39-201ENST00000621562 CDK12Q9NYV4 1490 aaPredicted RBP4.23□□□□□ -1.73
U1.39-201ENST00000621562 CGNL1Q0VF96 1302 aa4.22□□□□□ -1.73
U1.39-201ENST00000621562 EVC2Q86UK5 1308 aa4.22□□□□□ -1.73
U1.39-201ENST00000621562 PPIP5K1Q6PFW1 1433 aa4.22□□□□□ -1.73
U1.39-201ENST00000621562 RLBP1P12271 317 aa4.22□□□□□ -1.73
U1.39-201ENST00000621562 DEKP35659 375 aaKnown RBP4.22□□□□□ -1.73
U1.39-201ENST00000621562 IDI1Q13907 227 aa4.22□□□□□ -1.73
U1.39-201ENST00000621562 PDE3AQ14432 1141 aa4.22□□□□□ -1.73
U1.39-201ENST00000621562 GGT6Q6P531 493 aa4.22□□□□□ -1.73
U1.39-201ENST00000621562 OSCARQ8IYS5 282 aa4.22□□□□□ -1.73
U1.39-201ENST00000621562 RUNDC1Q96C34 613 aa4.22□□□□□ -1.73
U1.39-201ENST00000621562 ATAD2Q6PL18 1390 aa4.22□□□□□ -1.73
U1.39-201ENST00000621562 PIK3C2AO00443 1686 aa4.22□□□□□ -1.73
U1.39-201ENST00000621562 LTN1O94822 1766 aa4.22□□□□□ -1.73
U1.39-201ENST00000621562 RGPD2P0DJD1 1756 aa4.22□□□□□ -1.73
U1.39-201ENST00000621562 CPSF1Q10570 1443 aaKnown RBP4.21□□□□□ -1.73
U1.39-201ENST00000621562 RIMS2Q9UQ26 1411 aa4.21□□□□□ -1.73
U1.39-201ENST00000621562 IGHDP01880 384 aa4.21□□□□□ -1.74
U1.39-201ENST00000621562 RARSP54136 660 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms